Amphiprion ocellaris (clown anemonefish): 111563358
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Entry
111563358 CDS
T06018
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111563358 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111563358 (cnot2)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111563358 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111563358 (cnot2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
111563358
NCBI-ProteinID:
XP_023118168
Ensembl:
ENSAOCG00000022167
LinkDB
All DBs
Position
3:7764097..7773556
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AA seq
523 aa
AA seq
DB search
MFGARKKFVEFVEVVDNDFTDESMYYNQPSMFPHRSDKDMLSSPSPSSSGQLSQLGASLY
GPQSALGFSVRGMGNSTPQLNRNLTQGTQLPSHITPTTGVPTMSLHTPPSPSRGTLPMNS
RNMLNHSQVGQGIGMSGRTNSMGSSGLGSPNRSSPSIICMPKQQPARQPFTINSMSGFGM
NRNQAFGMNNSLSSSIFNGTDGSENVTGLDLSDFPALADRSRREGTGNPTPVLNPLAGRA
PYVGMVTKPSTEQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSTSKSTSNADGPK
FPGDKTASAQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMIGLLTFIRAAETDPGMVHLA
LGSDLTTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLA
RYGEDLLFYLYYMNGGDLLQLLAAVELFNRDWRYHREERVWITRAPGMEPTLKTNTYERG
TYYFFDCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgctagaaagaagtttgtagagttcgtcgaggtagtcgataacgactttact
gatgaaagcatgtactacaaccagccgtcgatgtttccacatcgatcggacaaagatatg
ctgtcctcaccttcaccatcgtcgtcgggtcagctgtcgcagctcggtgcaagtttgtac
ggtccacaaagtgcacttggcttctcggtacggggcatgggaaacagtacacctcagtta
aaccgaaatttaacgcaaggcacgcagctaccaagtcatatcacccctacaacgggggtc
cccaccatgtccctccatacccctccatcgccaagcagggggacattaccgatgaattcg
aggaacatgctgaaccactctcaggtcggtcaaggcattggaatgagcggcaggaccaat
agtatgggaagctcggggctgggaagccccaaccgcagctcgccaagtatcatctgtatg
cccaaacagcagccagcacgccagccctttaccataaacagcatgtcaggattcggtatg
aaccgcaatcaggcctttgggatgaacaactcattatcaagcagcatcttcaatggcaca
gatgggagtgaaaatgtaacaggactggatctgtcagacttccctgcattagcagacagg
agtcggcgagaagggactggaaacccaacaccggtgctcaacccactggctggacgggct
ccttatgttggcatggtgacgaagccatcaaccgaacagacacaggatttctctatccac
aacgaggacttccctgcactgcctggcccaaactataaggaccccacgttgaacaacgac
gacagcaaaactaacttgaactccacaagcaagagcacatccaatgcagatgggcccaag
ttccctggagacaagacggcctcagcacagaacaacaaccagaagaaagggatccaggtg
ttgcccgatggtcgggtgacgaacattccctcaggaatggtgacagaccaatttggcatg
attggcctgctgacgtttatccgggcggcggagactgatccggggatggtccatctggcg
ctaggaagtgacctcacgacactgggactcaatttaaactcaccagaaaacttgtacccc
aagtttgcctctccttgggcttcagcaccttgtcggcctcaagacatcgatttccatgtt
ccatcggagtatttaaccaatatccacataagagacaagttggctgcaatcaaactggct
cgatacggtgaagacctgttgttctacctttactacatgaatggtggagatctgctacag
cttttggcagcagtagagctctttaaccgggactggaggtaccacagagaggagcgagtt
tggataacgagagcacctggcatggagccgacactgaaaaccaacacctacgagaggggc
acctactacttttttgattgtcttaactggaggaaagtagccaaggaatttcatctggag
tatgacaagctggaagagaggcctcacgtgccaacaacattcaactacaacccagcccag
caggccttctaa
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