KEGG   Amphiprion ocellaris (clown anemonefish): 111563436
Entry
111563436         CDS       T06018                                 
Symbol
hltf
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aoce04121]
    111563436 (hltf)
   03400 DNA repair and recombination proteins [BR:aoce03400]
    111563436 (hltf)
Enzymes [BR:aoce01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111563436 (hltf)
Ubiquitin system [BR:aoce04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    111563436 (hltf)
DNA repair and recombination proteins [BR:aoce03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    111563436 (hltf)
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX DEAD ResIII zf-RING_2 zf-RING_5 RING_XB3-XBAT31 zf-ANAPC11 zf-C3HC4_4 Prok-RING_4 HDA2-3 zf-rbx1 zf-Nse DUF5817 zf-RING_4 zf-RING_6
Other DBs
NCBI-GeneID: 111563436
NCBI-ProteinID: XP_023118273
Ensembl: ENSAOCG00000018984
LinkDB
Position
20:complement(8846921..9042947)
AA seq 955 aa
MFSRRWRFGFDRFTEVDLFTDRHETSAETLSQAIRAAASEEPDADGSVLFGHLRGTVVGL
RYYTGVVNQGEMVGLVRQPQNPYDRKAVMVANVYGNQVGHIKKELAAAMAYVMDNNLAKV
EGVVHSGTKNTFTMPVNLSFWGKEENKNTVMESMARRGYKLNTGVGIQAGAYQKSSSGPV
ACGFPPKKGLTIPLTAEELKNAFDNLFEGLMESKDGEKEAAEAVSTSLLPHQKQALSWMC
ARENKSALPPFWEKRGELYYNSLTCFSAKEIPERVRGGILADDMGLGKTLTTISLILTNF
HNGKPLPVEICEKQFSPTKAKAQMSPKLEGSSSAGMGNTAGGSLCSDGTQVEATPDVVEI
ADEPEKSTSKGKKPMKRKPSKEASVLFEDLDFAAALSGSTSDTASKKKKTASATQRVESS
VTENTDDLSAKTTLIICPLSVLSNWLDQFEQHVHSNVKLNVYLYYGSERNRSKKFLSSQD
VVVTTYNVLSSEFGNKSPLHGINWLRVVLDEGHIIRNPNAQMSKAVLDLKAQRRWILSGT
PIQNSVKDLWMLLAFLRLKPFDVREWWNRVIQRPVTQGERAGVQNLQTLVKCITLRRTKT
SEVNGRPLVSLPDKKVYVEQVELSQSEREEYERARKEGKNIIKRYVAEGTVLRNYADVLA
ILMRLRQHCCHPDLLAKIPSELGAAATPAELRERLIEKLRLVLASGSDEECSVCLDSVRL
PVITHCAHVYCRPCIAQVISTEQEKARCPLCRSEIKTSELVEFPPEELEESSTNSERWRT
SSKVQALMGNLLRLRCEDSSIKYLVVSQFTRFLTILETPLREHSFSFVRLDGTMNQKRRT
QVIQEFQSSAADSPVIMLLSLKAGGVGLNLTAASHVFLMDPAWNPATEEQCIDRCHRLGQ
KKKVVVTKFIVKDSVEENMVKIQRKKQDLVEKAFGSTNADRKTSRIDDIRALMEL
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgttttctcgcaggtggaggtttggttttgacagattcactgaggtagacctcttcaca
gaccgccatgagaccagtgcagagactctttctcaggccatcagagctgcagcatctgag
gagccagatgcagacggcagcgtgctgtttggccacctaaggggcaccgtggtcggcctc
agatattacacaggggtggtgaaccaaggagagatggtcggtttagtgcggcagccccag
aatccttatgaccgcaaagcagtaatggttgccaacgtttatggcaaccaggtaggacac
atcaagaaggagctggctgcagctatggcttatgtcatggacaacaacctggctaaagtt
gagggggtggtgcactcaggaacgaaaaacacattcaccatgccggtgaatctgtccttt
tgggggaaagaagagaacaaaaacactgtgatggaatctatggcacgtcgtggatataaa
ctgaacacaggtgtaggcattcaagcaggtgcgtaccagaaatcatccagtggtccagtt
gcttgtggatttccacctaaaaaaggcctgaccatcccactgactgcagaggagctaaaa
aatgcatttgataacctgtttgaagggttgatggagagtaaagatggggagaaagaagca
gctgaggctgtgagcacttccctcctgcctcaccagaagcaggcgctgtcctggatgtgc
gctcgagaaaacaaatctgctctgccgccgttctgggagaagagaggcgagctgtactac
aacagcctcacatgtttctcagccaaagaaataccagagagggttcgtggaggaatactg
gcagacgacatggggttgggtaaaactctgacaacaatctctttgatcctcaccaacttt
cacaatggaaagccactgcctgtggagatatgtgagaagcagttttcacctacgaaagct
aaagcacagatgtcgcccaaacttgaagggagcagcagtgcaggaatgggcaatactgca
ggaggctctttatgctcagacggaacccaggtggaggcaacaccagatgtagtggagata
gcagatgagccagagaaaagtacaagcaaaggcaagaaacccatgaagcgaaagcccagt
aaagaggcttcagtattgtttgaggatctggactttgctgcagcgctgagtggctcaaca
tcagatacagcctcaaagaagaagaaaactgccagcgccacacagcgtgtggaatcctcc
gtcactgaaaacacagatgacttatcagccaaaacaactctcatcatctgtccgctgtct
gtgctcagcaactggctggaccagtttgagcagcatgtgcattctaacgtgaagctaaac
gtctatctgtactacggttcagagcgcaacaggagcaagaagtttctgtcctctcaggat
gtggtggtcacaacatacaacgtcctttcttctgagttcgggaataaaagtcccctacat
gggatcaactggctgagggtcgtgctggatgaaggacacatcataagaaacccaaatgca
cagatgagtaaagctgtgctcgacctgaaagctcagagacgctggattctttcaggtact
cctatccagaacagtgtgaaggatctgtggatgctgctggccttcctgcgtctgaagccc
ttcgatgtgcgagagtggtggaacagagtgatccagagaccagttacacaaggagagagg
gctggcgtgcaaaaccttcagaccctggtgaagtgcatcaccctgcgacggaccaagacc
agtgaggtgaacggacgtcctctggtgtcactgcctgacaagaaggtgtacgtggagcag
gtggagctcagccagtcggagagggaggagtacgaacgggcgcgcaaggaaggaaagaac
atcatcaagagatatgtagcagaagggacggtcttgaggaattacgctgatgtactagca
atcctgatgaggctccgacagcactgctgccaccctgatctgctggcaaagataccatca
gagttaggcgctgcagcaacaccagcagaactgcgggagcgtctgatagaaaagttacgg
ttggtgttggccagcggctctgacgaagagtgttcagtgtgtctggactcagtgcgactt
cccgtcatcacacactgtgcccacgtttactgccggccctgcatcgcccaagtcatcagc
actgagcaggaaaaggctcgctgtcctctctgtaggagtgagatcaaaaccagtgaactg
gtggagtttccaccggaggaactggaagaaagtagtacaaactctgagaggtggaggaca
agctcaaaggtgcaggcgctgatgggaaacctgctcaggctgcgatgtgaagacagcagc
attaagtatttggtcgtctctcagttcactcgattcctcaccattctggagactccactc
agagagcacagtttcagttttgtgcgtctggatggcaccatgaaccaaaaaaggaggacc
caagtcatccaggagtttcagagctctgcagccgacagtcctgttatcatgcttctgtct
cttaaagctggaggagtggggcttaatttgaccgctgcttcccatgttttcctcatggac
cctgcctggaacccagctactgaggagcagtgtattgaccgctgccaccgtttgggccag
aagaagaaagttgttgtcaccaagttcattgtcaaggactcggtggaggagaacatggtg
aagatccagaggaagaagcaggacctggtggagaaggcgttcggctccacaaatgccgac
agaaaaacatctcgtatcgacgacatccgagctctaatggagctgtaa

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