Amphiprion ocellaris (clown anemonefish): 111563440
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Entry
111563440 CDS
T06018
Symbol
stag1a
Name
(RefSeq) cohesin subunit SA-1a
KO
K06671
cohesin complex subunit SA-1/2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111563440 (stag1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111563440 (stag1a)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
111563440 (stag1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd3
Motif
Other DBs
NCBI-GeneID:
111563440
NCBI-ProteinID:
XP_023118278
Ensembl:
ENSAOCG00000019427
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Position
20:complement(8701721..8745903)
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AA seq
1260 aa
AA seq
DB search
MITSELPVLQDSSNESGATDAVGLSMSMGEMEDPEVKGKKKRGRPGKQAPASNKKPRKSP
TDKSVGVTRGRGKANGVAQHNGDGGDPVTLFEVVKLGKSAMQSVVDEWIESYKQDRDLAL
LDLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPMWKKFRYN
FCEFICVLIRQCQYSIIYDEYMMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVA
LNLSIHQDNTQRQYEAERNKIAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFV
HRYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNL
YTNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLVTLILQGSEDALSNEDCENVY
HLVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEALAKRRGRSSPNGNLIRMLVLFFLESEL
HEHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEMLSDRQESALIELMVCTIRQAA
EAHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPQ
YFDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIA
RSQLIDEMTDRFAHSVEELLQEAEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGSCY
RLLKAGIEQGSMPEQIAVQALQCSHYSILWQLVKITEGVPSKDDLVALRRVVKSFLAVCQ
QCLSNVNTPVKEQAFMLLCDLLMIFSHQLVSGSREGLQPLVFNPDSTLQNELLNFVLDHV
FIDQDDESQSMEGDEEDEANKIEALHKRRNLLAAFCKLIIYDIVDMPAAADIFKHYMKYY
NDYGDIIKETLSKTRQTDKILCAKTLILSLQQLFNELLQDQGPNLDRTSSHVSGIKELAR
RFALTFGLDQIKTREAVATLHKDGIEFAFKYQNPRGPEFPPINLAFLEVLSEFSSKLIRQ
DKKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGDEDHMSVTSGSSSKTGSVRSK
KGRPPLHKKRIEEESSVEGSWMMRNDTLQTPGALQTPQLTSTVLRENRPAEHMPDPDSEP
GSENDFVHNPQMQMSWLGQQKMEEVNRKDRTGMNYIKSRSNQGVRQTVRGLMEDDAEPIF
EDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFSMPMF
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctcggagcttcctgtcctacaggactcgtcaaatgagtctggggcaacagat
gcagtgggcttaagcatgagcatgggcgagatggaagatccagaggtgaaaggcaagaag
aagagagggaggcctggaaaacaagcaccggcatctaataagaaaccccggaagtcgccg
acagacaaaagtgtgggtgtgaccagagggcgagggaaagccaatggtgtggctcaacat
aacggcgatggcggagaccccgtcactctgtttgaggtggtcaaactgggcaagagtgcc
atgcagtctgtggtggatgagtggattgagtcgtacaaacaggacagagacttggcgctg
ctagaccttatcaactttttcatccagtgctcaggttgcaaaggcactgtgagaattgag
atgttcaggaacatgcagaacgcagagatcatccgtaagatgactgaggagtttgacgag
gacagtggggattatcctctaaccatgccaggcccaatgtggaaaaagttccgctacaac
ttctgcgagtttatctgcgtgttgatccgccagtgtcagtacagcatcatatatgatgaa
tatatgatggacactgtgatttctctcctcaccggactttctgactctcaagtgcgagcc
ttcagacacacctccacattagcagccatgaagttgatgactgcgctggtaaacgttgcg
ctgaacctcagtattcaccaggacaacacacagagacagtatgaggcagagaggaacaag
atagccggcaaacgagccaacgagaagctggaactgctactacaaaagaggaaggagctt
caagaaaaccaggacgaaatagagaatatgatgaactccatcttcaagggtatctttgtg
catcgctacagggatgcgattgctgagatccgagccatctgcatagaggagatcggagtg
tggatgaagatgtacagtgatgcatttctcaatgatagctacctgaaatatgtcggttgg
acactacatgataggcaaggagaggtgcgtctgaagtgcctgaaggctttgcagaacctg
tacacaaacagagaactgtttcctaagctagagcttttcacaaaccgcttcaaggatcga
atagtatcgatgacactggataaggagtatgatgtggctgtagaggccatcagactggtt
acgctcatcctgcagggcagtgaagacgctttgtccaatgaggactgtgagaatgtgtac
catctggtttactctgctcatcgcccagtggctgttgctgccggagagttccttcacaga
aaattgttcagtcgccatgacccacaggcagaagaagcgttggcaaagcgccgaggaaga
agcagtcccaacggaaatctcatccgcatgctggtgctcttctttttagagagcgagctc
catgagcatgcagcctacctggtagactcgctgtgggaaagctctcaggagctgctgaaa
gactgggagtgcatgactgaacttctgctggaggagcctgtgcagggagaagagatgttg
tcagacaggcaggagagtgcgctaatagagctgatggtgtgcaccatccgacaggcagca
gaggctcacccacctgtcggcagaggcaccggcaaacgggtgctgacagcaaaggagagg
aagacccagatagacgataagaacaaactgactgagcacttcatcatggctctgcccatg
ctgttatccaagtaccaggcagactcggagaaggtagccaacctgctgcagatcccccag
tacttcgacctggacgtgtacagcgccgggcgcatggagaagcacttggacgccttactg
aagcagatccggctggtggtggagaagcacattgagacagacgtgctggaggcctgcagt
aagacctacagcatcctctgctctgaagaatacaccatcatgaaccgcgtggacatcgcg
cgctcacagctcatcgatgagatgaccgatcgattcgcacactcagtcgaagagctgctg
caagaggcagaggaggccgatgacgatgacatctacaatgtgttatctaccctcaagcga
ctcacagccttccataatgctcatgacttgacgcggtgggatttatttgggagttgctac
cggctgctgaaggcgggtatcgaacagggctccatgccagagcagatagcagttcaggcg
ctgcagtgctcccactactctatcctctggcagctggtcaagatcacagagggagttccc
agcaaggatgacctggtggctctgagaagagtggtaaagtctttcctggctgtgtgtcag
cagtgcctgtccaatgtcaacacgccagttaaagaacaggcgttcatgcttctctgcgac
ctgctgatgatcttcagtcaccagctggtttctggcagcagggagggcctccagccgctg
gtcttcaacccagacagcactctgcagaacgagctgctaaactttgtcctggaccacgtc
ttcatcgaccaggatgacgagagccagagcatggagggagatgaagaggacgaggccaac
aagatcgaggccctgcacaaaagaagaaacctgctcgcagctttctgcaaacttatcatc
tacgacatcgtagacatgcctgctgctgctgacatcttcaaacactacatgaagtattac
aacgactatggcgacatcatcaaggagaccctcagtaaaaccagacagacggacaagatt
ctctgtgcaaagacactcatcctcagtttgcagcagctgttcaacgagctgctgcaggat
caaggtcccaacctggaccgaacatcgtctcacgtcagcggcatcaaggagctggcccgc
cgcttcgccctcacattcggtctggatcagatcaagaccagagaggccgtcgccacgctg
cacaaggatggaatagagtttgcatttaagtaccagaatcctcgaggaccagagtttcca
cccatcaacctggccttcctggaggtcctgagtgaattctcctccaaattaatccgccag
gacaaaaagacagtccactcttacctggagaagttcatgtcagagtcgatgtcggagcgt
cgggaggacgtgtggctgccgctgatctcctacaggaacagcctgctgacgggaggagac
gaggaccacatgtctgtcacgtcgggctccagcagcaagaccggttcagtccgcagcaag
aagggacgaccgccactacacaagaaacgcatcgaggaggagagtagtgtggagggctcg
tggatgatgcgtaatgacaccttacagacaccgggggcgcttcagactcctcagctcacc
tcaacggtcctcagagagaacagaccagcagaacacatgcctgacccggactcagagccc
ggatcagagaacgacttcgtacataatcctcagatgcagatgtcgtggctcggccagcag
aaaatggaagaggtgaacaggaaggaccgaacgggcatgaactacatcaagtcacgcagc
aatcagggtgtgaggcagactgtacgtgggctgatggaggatgacgcagagccgatcttt
gaggacgtgatgatgtcatcgcggggtcagctggaggacatgaacgaggagtttgaagat
accatggtgatcgacctgccaccatcaaggaacagacgcgaaagagcggaattaagacca
gacttctttgactctgcagcgatgattgaggatgagtcgggattcagcatgcccatgttc
tga
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