Amphiprion ocellaris (clown anemonefish): 111563668
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Entry
111563668 CDS
T06018
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03440
Homologous recombination
aoce03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
111563668 (brca2)
03460 Fanconi anemia pathway
111563668 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111563668 (brca2)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111563668 (brca2)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111563668 (brca2)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
111563668 (brca2)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
111563668 (brca2)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
111563668 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
111563668 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
111563668
NCBI-ProteinID:
XP_023118617
LinkDB
All DBs
Position
7:28587753..28602921
Genome browser
AA seq
3078 aa
AA seq
DB search
MDSPSKDMYDTFKDEIWKELGPLDPNWFDILTAQTSANEEDVSDQDELCANQEGNFKTPL
EKPAVDSQLFSTPKVFRHSRILSPETEDEHSFTTEQEKGALPWSTTQSPCLFQMSKQGIP
DAKYGGIQPQSQGSFDLLHTPHKSPASYAKHISESLGAQINPDISWTSSFNTPPAVPSTL
ILSKTDESPCPVNVSVDNTVVFVRKLFPSLSNASKVGVAPLKNNDMPATDQGAVSPDDSF
QTSLNQNEVVWQQKLPDAIEDGEICTTVASVPDGAENVSSIFFANSSSALRKVRPNKTKR
KQIIAAKEHGCSFTDNLTTNNAASSEERAADREPGSVFSSPPEKSGVTGITQWSPLSLSE
ISPSAVDINILTGQLKSGCDSCQPVMPPMKITDSGPNKKKRKFVYTVGTVKTQSQGNEAQ
IQKMISSPGIPDSGQELSVKQLRKASGGADCCSTGQKLGNLAGGNLPPSVQANVQDLDMS
QLHRDFAQDFSQIPDSGMLSKVVEHTRSHFSPSACLSAMKQAKQKAKQASSHSDCDEVRS
RRLVSASYQNYSTNEGTVIDSGFQSAVTDLTHTSTSSFAVPFSENTDQSQQCPGFKTDIH
RTTPLTSTNKGNGKVHLGAEAKAELSSAQKERWILDPGTETGLHMERIATQLLSSANGAV
NSTNCIPLNGQIHGSLPEETAFSLPSVSASGFKTASNKSIRISSANLEKAKHLFEESQNE
RTFSDRLTKSIHTTEQKISTSNGPVKNATSTSNLNSLSETSGNVSCQLTASQKADVTELC
TLLEETDSQFEFTQAKISQVQQHGQDDVRSPQKADKELDPDFLTGIDFDDSFSSDAEKHL
ATVIPDKMTSVSNDKANSGTSSITRKSTDVSFSSAVVKENSSTGDISFSSEHISEGSSCV
MSTKPNHLQRTEHTETSKMENKNPLMLGVAFKTAGENVLRVSKTCLSKARALFADLQENL
PDQKSPDMQNSENDDKTKQQCSVDSNTGEDDSKLTLKDDCHVGERIQGCHSSMESAVCSD
KRVTSIADNDATRSFRNGKVDTTMCQSGFHMASGKGIAISAKYMRQAEAFFKDCDANDQN
DSILVKYKKSIEPVSERADNKKNLSKYKSPRQVRISDEHASGRTNCENVNAGLRAPHTKE
PHPDHMKMKSIGFNGRLPLKNTMSFHGNPFSTSKPFSHPLCTTSKNTDSAAIDELSSCDG
FCTASEKKVSVSADALKKPESLLKEICTLEDTNNPLDQKENCESTGQLTSQTQVSPPKNG
GFQTASGNRVVISSAALKKAKSLFSECDEVDDKLCVRPSHSKPPVHGPPPRNDEFLTASG
KRVALSSEVLQKAKSLFSDISAEIQDGLHTRDSDKKQEKIHCSFTAARGEKAHLSQKNPV
KEFDSTSTKANQETDAFFKDFDMDGNSGMSVTCKSVSSSASDKKTLSNIKADQTLPVRFS
EQRGHGYTEHTNKLGKQKEDAVLPQNTGFQTASGKGVSISSAALKKAKSLFSECDEVDEL
SLKPSHFKCPVQGPPPRKDGFLTASGKQVALSSEALLKAKSLFSDISYSADVSHIKSSDK
KQDNHEQCGFTTAGGQKVHMSQRNLLKAKHLLSEFDSVSAKAMQEADDLFKDCQMDCNNA
TSIKCRSIAPLSRSDNQKKPHERLTVNVSERAESGCTEHTSKQEEPKEETLPPLNGGFRT
ASGKGVAISSEALRKAEALLSECEKIDHKIGSMPPHSMTPLPAPSFRNRGFLAASGKLVA
LSSEALQKAKALFGDISLSADITAISDKRKSDEKFKDAQNNTDKKHSGFTTAGGAKVHVS
EKSLLKANNLLKEFADGECHDSRYSGASPCDTHKLDLLKMKDVNQTTNSDLTAAIDKYMP
TKESASFAVKSAPADAFQFQEDKIIPLGTENLHDITEQEMSCVLDCEINERSSKGPKVIR
TDEFSVLSFQSLNLTGCTETQQKFLAQEALDCTKALLEDEGLAGQSLPMTLENMPLEDNP
QSSNTSAEDEKTRGKRSMEDADMTSQPPLKRRLLEEFDRTVDGPRGSTLQPVKNCPNGVM
RDRRVFKYSASLHPNITGPPRTGKNLIETRLKRTTHQSTPGDSRSAYSKMPAFVPPFIKN
TTTETHKNAAVKDEIRAPTVFVPPFKKQRTVQESSSKPQEEEEKHPHHFAVPSNSCTYVP
PSKKTHGARDVTALMDTTSDNMMNSQSLSGGCGSISYGAEVSHVDDTFSRSQEIYQNLQS
TELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVMRIPLKVAMDEKPPARYTQKQLYEY
GVHKHVSDITGETAESFRFNLLQFLKKEAFADEGGIQLADGGWLIPSKDGTAGKEEFYRS
LCDTPGVDPKLISEAWVYNHYRWIVWKQASMEKSFPEAVGGLCLTPEQVLLQLKYRYDVE
VDHSRRPALRKIMEKDDTSAKTLILCVCEIVSRGHSPIRQIRSDTKNPQSANAKVEAPSA
VVWLTDGWYAIKAQLDEPLTAMLHKGRLAVGGKLIIHGAQLVGSQDACSPLEAPESLMLK
ICANSSRPARWDAKLGFHRDPRPFLLPVSSLYSNGGPVGCVDIIILRSYPIQWMERKTDG
GAVFRSVRAEEKEARRYNNHKQKAMETLFTKIQSEFEKEEKRNNKPQRRRQRRSRQNFAS
LQDGEELYEAVGDDPAYLEAHLSIQQMETLHTYRRSLVEKKQAELQDRYRRALEGEDNEG
SCPKRDVTPVWRLCITDSMGQPGSVYQLSLWRPTSDLQSLLKEGHRYKVYNLTTSDGKKH
SSVESVQLTGTKKTQFEELQASQEWLSARFQPRVSTNFVTLQNPEFQPLCGEVDLTGCVI
SVIDVQGPSPAFYLADGNLNFVKVRCFSSLSQSGLEDVVKPNVLLALSNLQLRGQSMHPT
PVVYAGDLTVFSTNPKEAHLQESLSQLRNVVQHHENFFLSAEEKLSHLIRSDGLSSITSP
ALQPQTPASATDKRQETKTSGTLQKPNRSLGSFTPVSRNPPAATSSSEKDPRSLKRRRAL
DYLSRIPSPPPLSHLGSVGSPCVNKTFNPPRRSATPSTLKTVQTPAHKPTDSLVEDEWVH
DEELAMIDTQALHGGDLL
NT seq
9237 nt
NT seq
+upstream
nt +downstream
nt
atggattcaccctcaaaagacatgtacgacacgttcaaagatgaaatctggaaagaactg
ggaccactggaccccaactggtttgatatactgacagctcaaacatctgctaatgaggaa
gatgtctctgaccaagatgagctgtgtgctaaccaagagggaaattttaaaacaccttta
gaaaaacctgcggtagacagtcagctgttttcaacccccaaagttttcagacacagtcga
attttgtcacctgaaactgaggatgagcattcattcactactgaacaagaaaaaggagca
ttgccatggtcaacaacacaaagtccatgtttgtttcagatgtcaaaacagggcattcca
gatgcaaaatatggaggtatccagcctcagagtcagggaagttttgatctgcttcatacg
ccacacaaatctccggccagctatgccaagcatatttctgaaagtctcggtgcacagatc
aatcctgatatttcatggacgagttcgtttaataccccaccagcagtgccatccaccctg
attttatctaaaactgatgagagtccctgtccagtgaatgtttctgtcgacaacactgta
gtttttgtacggaagctttttccttctctttcaaatgcatccaaagttggggtagcacca
cttaaaaacaatgacatgcctgctactgaccaaggtgctgtttcccctgatgattccttc
cagacttcattaaaccagaatgaggttgtttggcaacagaagcttccagatgcaattgaa
gatggagaaatttgcaccacagtagcaagtgttcctgatggagctgaaaatgtttcctcc
attttcttcgccaacagtagttcagcactgagaaaagtgagacctaacaaaaccaaacga
aagcaaatcattgcagccaaagaacatggctgcagtttcacagacaacttgacaacaaac
aatgccgcatcaagtgaagagagagcagctgatcgggaacctggcagcgttttttcatcc
ccacctgaaaaatctggagttacaggaatcactcagtggtccccattgagtttatctgaa
atttccccttctgctgttgatatcaatattttaacaggacaactaaagagtggctgtgat
tcttgccagccagtcatgccaccgatgaaaatcacagactctggacctaataagaaaaag
agaaaatttgtttacactgttgggaccgtgaaaacacaaagtcaaggaaatgaagcacaa
attcagaagatgatttcctcaccagggattccagattctggacaagaattgagtgtcaag
cagttgaggaaagcctcgggtggagcagactgttgcagtactgggcaaaaattgggaaat
cttgctggaggaaatctacctccatctgtacaagcaaatgtccaggatcttgacatgtct
cagcttcacagagattttgcacaagacttcagccaaatccccgactctggtatgctgagt
aaagttgtagagcatactagaagtcacttttctccatcagcctgtctgtcagccatgaag
caagcaaagcagaaagcaaagcaagctagctctcactctgactgtgatgaggtcagaagc
agaagacttgtttcggcctcttatcaaaattattccaccaatgaaggcactgtaattgac
agtggattccaatctgcagttacagatctaactcatacaagtacatcttcatttgctgtt
cctttctctgagaacactgaccaaagtcaacaatgccctggctttaaaactgatatccac
aggactactcctttgacatctacaaataaaggaaatggaaaagtacatttgggtgctgaa
gctaaagccgagctgtccagtgcgcagaaggaaagatggatactggaccctggaacagag
actggcttgcacatggagagaattgcaacacaactactgagcagtgcaaatggagctgtc
aatagcactaattgcattccactaaatggtcagattcatggcagtctgccagaagaaaca
gctttttctcttccttctgtaagtgcatcaggattcaaaactgcttctaacaagagtata
cgaatttcctcagccaacctggagaaagccaagcacctctttgaagagagtcaaaatgaa
aggacttttagtgatcggcttaccaaaagcatccataccactgagcagaaaattagcaca
agtaatggaccagtgaaaaatgcaacttctacctcaaacttaaattctttaagtgaaaca
tctgggaatgtgagttgccagttaacagcttcccaaaaagctgatgtgacagaactgtgt
actctcttggaagagacagacagccagtttgagtttacacaggccaaaatttctcaagta
cagcagcatggtcaagatgatgtccgctctccacaaaaagctgacaaggaacttgaccca
gattttcttacgggtatagattttgatgacagcttcagttcggatgctgaaaagcacctg
gcaactgtaatacctgacaaaatgacctcagtttcaaatgataaagcaaatagtgggaca
tcaagcatcacaaggaaatccacagatgtgtctttctccagcgcagtggtgaaagaaaat
tcctctactggagatatatctttctcttcagaacacatttctgaaggcagtagctgtgtt
atgtcaactaaaccaaatcaccttcagagaactgagcacactgaaacaagcaagatggag
aacaaaaatcctttaatgcttggtgtggcatttaaaactgcaggagaaaatgttttgaga
gtttcaaaaacatgtctaagcaaagctagagctttgtttgcggatttacaggagaatctg
ccagatcagaaatcaccagacatgcaaaacagtgaaaatgatgataaaaccaaacaacag
tgcagcgtggattctaacactggcgaggatgattctaagttgacccttaaagatgactgt
catgttggagagagaattcaaggctgtcattccagtatggagtctgccgtctgttcagac
aaacgggtcacaagcattgcagataacgacgcaaccagaagttttagaaatggcaaagtg
gacacaaccatgtgtcaaagtggcttccacatggctagtgggaaagggatcgctatttca
gcaaaatacatgcgacaggcagaggcttttttcaaagactgtgatgcaaatgaccaaaat
gatagcatattagtaaaatataagaaaagcatagaacctgtgtctgaaagagctgacaat
aagaaaaacctttcaaaatataaaagccctcgacaagtcagaatttctgatgaacatgcc
agtggacgcactaattgtgaaaatgtgaatgctggactgcgtgcacctcacacaaaggag
ccacatcccgatcatatgaaaatgaaaagtattggtttcaacggcagactacctttaaaa
aatacaatgtctttccatggaaacccattttccacttcaaaaccattttctcacccgctg
tgcacgacatcaaagaatactgattctgctgccatcgatgaattgagcagttgtgatgga
ttctgtacagccagcgagaagaaagtatctgtgtcagctgatgcactgaaaaagcctgag
agtcttttgaaagaaatttgtacactcgaggacacaaacaacccgctagatcaaaaagaa
aactgtgaaagcacagggcagcttacctctcaaactcaggtttcaccacctaaaaatggt
ggatttcagaccgccagtggaaatagagttgtcatttcatctgcagctctcaaaaaagca
aaatctctgttcagtgaatgtgatgaagtggacgataaactctgtgttaggccatcacat
tccaagccaccagttcatggtccacctcccaggaatgatgaatttctcacagccagtggt
aagcgagtggcactttcatcggaggtgctccaaaaggcaaaatctctctttagtgacatc
agtgcagagatccaagatggtttgcacacaagggacagtgacaagaaacaagagaaaata
cattgtagtttcacagctgctcggggtgaaaaagcccatttgtcacagaaaaatcctgtg
aaagaatttgattcaacttcaacaaaagcaaaccaagagacagatgctttcttcaaagac
tttgatatggatggtaacagtggaatgtcagtaacatgtaaaagtgtgagcagttctgcc
agcgacaagaaaaccctttcaaacattaaagcagatcaaacgctgccagtcagattttct
gagcaacgtggacatggatacactgagcacacaaacaaactagggaaacaaaaagaagac
gctgtgctaccacaaaatactggatttcagacagccagtggaaaaggagtttccatttca
tccgcagctctcaagaaagcaaaatccctgttcagtgaatgtgatgaagtggatgaactc
agtttaaaaccgtcacatttcaaatgtccagttcaaggtccacctcccagaaaagatgga
tttctcacagcaagtggaaagcaagtggcactttcatcagaggcacttctgaaggcaaaa
tctctcttcagtgacatcagttacagtgcagatgtttcacacataaagagcagtgacaag
aaacaagacaatcatgaacaatgtggttttacaactgcaggaggacaaaaagtccacatg
tcacagagaaatcttttgaaagcaaaacatcttttgagtgaatttgattctgtttcagca
aaagcaatgcaagaggcagatgacttattcaaagattgtcaaatggactgtaacaatgca
acgtcaataaaatgtaggagtatagcacctttgagtagaagtgacaaccagaagaagcca
catgaaaggttgacagtaaatgtttctgaacgagctgaaagtggatgcactgagcacaca
agtaaacaagaggaaccaaaagaagagactttgccaccactgaatggaggatttcgaaca
gccagtgggaaaggagttgcgatttcgtctgaagctctcaggaaagcagaagctctttta
agtgaatgtgaaaaaattgaccataagattggttcaatgccaccacactccatgactcca
cttcctgctccatcattcaggaataggggatttctagcagccagtggaaaacttgtggca
ctttcttctgaggccttacagaaggcaaaagctctcttcggtgacatcagtttgagtgca
gatatcacagctatttcagacaaaaggaagagtgatgaaaaattcaaagatgctcagaat
aatacagataaaaagcacagtggtttcactactgcagggggagcaaaagtccatgtgtct
gagaaaagtcttttgaaagcaaacaaccttctgaaagaatttgctgatggagagtgtcat
gattcacgctactctggagcaagcccatgtgacacccataagttagatctattaaaaatg
aaagatgtgaaccaaactacaaattctgatctcactgcagccattgacaagtatatgcct
actaaggaaagtgcttcgttcgcagttaaatcagcacctgcagatgcatttcagtttcag
gaagacaaaatcatcccattggggacagaaaatttacatgacatcactgaacaggaaatg
tcatgtgtgctggattgtgaaataaatgagagaagcagcaaagggcctaaagttataaga
acagatgagttttcagttctaagctttcagtctcttaacctcaccggctgcacagaaact
cagcagaagtttcttgcccaggaagccctggactgcaccaaagccttgctagaagatgaa
ggtctcgctggccaaagtcttccaatgactttagaaaatatgccactggaagataaccca
caatccagcaacacatctgcagaagatgaaaaaacaagagggaaaagatcaatggaagat
gcagatatgactagtcagcctcccctgaaaagacgattactggaagaattcgacagaacg
gttgatgggccaagaggttcaacacttcagccagtgaaaaattgtccaaatggtgtaatg
agagacaggagagtcttcaagtacagtgcttctctccatccaaacatcacaggaccaccc
aggactggaaaaaacttaatagaaaccagattaaaaaggacaacacatcagtctacccca
ggagacagcagatcagcatattccaagatgccagcgtttgttcctccattcatcaaaaat
acaaccacagagactcataagaatgcagcggtcaaggacgagataagggcaccgactgtg
tttgttcctccattcaaaaaacaaagaactgtgcaagagagctcctctaaaccacaagag
gaagaggagaaacaccctcatcactttgcagtgccgtctaacagctgcacttatgtaccg
cccagtaaaaaaacacatggtgctcgagatgtaactgccttgatggatactacaagtgat
aatatgatgaatagtcagagcctttctggtggatgtgggtcaatcagttatggtgcagag
gtatcacatgtggatgacacattttccagaagccaagagatttatcagaaccttcagagc
actgagctggcacgagatatgcaggacatgaggatcaggaaaaagaagcgtcagaccatt
cggcctctaccaggaagcttgtttctaacaaaaacctctggggtgatgaggatcccattg
aaagtcgcaatggatgaaaaacccccagcaagatacacccaaaaacagctgtatgaatat
ggagttcataagcatgtttctgacatcactggtgagactgcagagtcttttcgcttcaat
ttgctacagtttctgaaaaaggaagcgtttgcagatgaaggtggtattcagcttgctgat
ggaggatggctgatccccagcaaagacgggactgcaggaaaagaagagttctatagatca
ttatgtgacaccccaggtgtggatcccaaactgattagtgaggcgtgggtgtacaatcac
tacagatggattgtttggaagcaggcttccatggaaaaatccttcccagaagcagtgggc
ggcctctgtctcacaccagagcaggttctcctacaacttaagtacagatatgatgtagag
gtggaccacagccgcaggccagctctgagaaagatcatggaaaaggacgacacatcggcc
aaaaccctgattctctgcgtttgtgagattgtgtccagaggtcactccccaatcagacag
attcgcagtgacacaaagaatccacaaagtgccaatgccaaggtcgaagctccatctgca
gtcgtttggctgacagatggttggtatgccataaaagcccagctggatgaacctctgact
gccatgcttcacaaaggtcgactggctgttggtggcaaattgatcatccatggggctcag
ctggtgggatcacaagatgcatgctccccgctggaggcgcctgaatctctcatgttaaag
atttgtgccaatagcagcagacctgcgcgttgggatgcaaagttgggatttcacagggat
ccacggccatttctgcttccagtctcctctttgtatagtaatggaggtccagtaggatgt
gttgacatcatcatactgagaagctaccccatacagtggatggagaggaaaacagatgga
ggtgctgtgttccgttctgttcgtgccgaagagaaagaggcgagacgatacaacaaccac
aaacaaaaagccatggaaactctatttaccaagattcaatcggagtttgaaaaggaggaa
aaaaggaataataaacctcaacgaagaagacaaagaaggagtcgtcagaattttgcaagt
ctgcaggatggagaggaactgtatgaagctgtgggagatgaccccgcttaccttgaggct
catttgagcatacaacagatggagactcttcacacctacaggcgttccctggtggagaag
aaacaggctgaactccaggatcgatatcgtcgcgctctagaaggcgaggataatgaaggg
agctgtcccaaacgagatgtaacacctgtgtggagactctgcatcactgactctatgggc
caacctggcagtgtttaccagttgagtctttggcggcccacctcggatcttcagtcacta
ctgaaggaaggtcatcgatacaaagtctataacctcacaacttcagacggaaagaaacac
agcagtgttgaatctgttcagctcactgggacaaagaaaacacagtttgaagagctacag
gcttcccaggaatggttatcagcacggttccagccaagggtctcaacaaattttgtgact
cttcagaacccagaattccagccactgtgtggagaggttgatctcacaggatgcgtcatc
agtgtcatagacgtacagggtccttctcctgcattttatttggccgatggtaacctgaac
tttgtgaaagtgcgctgtttcagtagcttgtctcagtctggcctggaagatgtagtaaaa
ccaaatgtcctgttggctctgagcaacctgcagctgagaggtcagtccatgcatcccaca
cctgttgtgtatgcaggcgatctgactgtcttctctacaaaccccaaggaagctcatctt
caagaatccctcagccaactcagaaatgtggtccagcatcacgagaacttctttctaagt
gctgaagagaagctttcgcatttaatcagatctgatggcctcagctccatcacttctcca
gctctgcaaccacaaaccccagcttctgcaacggacaaaagacaagaaacaaaaaccagt
ggaactttacagaagccaaacagaagccttggatctttcacacccgtcagcaggaaccct
ccagcagcgacatcttcatcagaaaaagaccccagaagtctgaaaagaaggagagctctg
gactatctgtctcgtatcccgtctccaccacctctctcccatctgggctcagttggttct
ccatgtgtaaataagacgttcaatcccccacggaggtctgcgactcctagcactttaaaa
actgtacagaccccagctcacaaacccaccgactcactggttgaggatgaatgggttcat
gatgaggaactggctatgattgatactcaggcattgcatggtggtgatttactgtag
DBGET
integrated database retrieval system
