Amphiprion ocellaris (clown anemonefish): 111563689
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Entry
111563689 CDS
T06018
Symbol
hmgb1b
Name
(RefSeq) high mobility group protein B1b
KO
K10802
high mobility group protein B1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03410
Base excision repair
aoce04140
Autophagy - animal
aoce04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
111563689 (hmgb1b)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111563689 (hmgb1b)
09143 Cell growth and death
04217 Necroptosis
111563689 (hmgb1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111563689 (hmgb1b)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111563689 (hmgb1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111563689 (hmgb1b)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
111563689 (hmgb1b)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
111563689 (hmgb1b)
MMR (mismatch excision repair)
Other MMR factors
111563689 (hmgb1b)
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
111563689 (hmgb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
LIN13_N
NOA36
HMG_box_5
ANAPC15
Motif
Other DBs
NCBI-GeneID:
111563689
NCBI-ProteinID:
XP_023118672
Ensembl:
ENSAOCG00000008840
UniProt:
A0A3Q1AVQ6
LinkDB
All DBs
Position
7:complement(28404743..28407336)
Genome browser
AA seq
200 aa
AA seq
DB search
MVKDPRKPRGKMSSYAYFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSPKEKGKFE
DMAKQDKVRYEREMKNYIPPKGQKKKRFKDPNAPKRPPSAFFLFCADFRPKVKVENPGLS
IGDTAKKLGEMWNSSSAESKQPYEKKAAKLKEKYDKDIVAYRTKGKVDSESAAAADDDDD
EEEEEEGDEEEEDDEDEDDE
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagatccacggaaaccaaggggcaaaatgtcctcatatgcctactttgtgcaa
acatgccgagaggagcataagaagaagcatcctgatgcctcggttaacttttcagagttc
tccaagaaatgctctgagcgatggaagacaatgtcgccaaaagagaaaggcaagtttgaa
gatatggccaaacaagacaaggttcgttatgagagggaaatgaagaattacattcccccc
aagggccagaagaagaagcgattcaaggaccccaatgccccaaagagaccaccctctgca
ttcttcctgttctgtgcagactttcgccccaaggtaaaagtagagaaccctggactttcc
attggggacacagcgaagaaactgggggaaatgtggaacagctcatctgcagaaagtaag
cagccatatgagaagaaggcggccaagttgaaggagaaatatgacaaggatatcgttgcc
taccgcacaaagggcaaagtggattcagaatcagctgctgcagctgacgacgatgatgac
gaagaggaagaggaggagggagacgaggaggaggaagatgatgaggatgaggatgatgag
tag
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integrated database retrieval system
