Amphiprion ocellaris (clown anemonefish): 111563760
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Entry
111563760 CDS
T06018
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X2
KO
K14296
nuclear pore complex protein Nup153
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
aoce03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111563760 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111563760 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111563760 (nup153)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111563760 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
111563760
NCBI-ProteinID:
XP_023118769
Ensembl:
ENSAOCG00000007098
LinkDB
All DBs
Position
15
Genome browser
AA seq
1527 aa
AA seq
DB search
MTAIRRRNTDRHSDERAMAATGGGKIRSRRYHIASKPYAKSKQQSGLISRVTDTVKSIVP
SWLQKYFKNEDAPEGGEAVQGPNRNCQPPPPPNGSEEGPPPLDGRDSPEPSTSNTEPSTS
RASLNFQEYVLSRPPLSRSHLHFTPLDPSAPTLGASSSLFSQPSTSSAPGPFSTGFSLVK
EIKDNLSQHEDDNISTTSGFSSRASDKDVPTSKTASLPQLWSPETDRTNCGPQPSQSSLK
KPAFNLSVFGTSSSSTLNSTVLNSSQLGDSPFYPGKTTYGGAAAVRSFRTRPGTPYQAPV
RRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPAAASSPLSPSMDGINLDP
SHFQPKKKRMESTLPPVQKLMVPATASVSGNRSVSFRATLTPGGVSRTLDRTTRETQTRQ
SPQLPEATPGPSQSTMGSSGPAYPLSSTPAASSVGSGGGKMKRERSSARPSSKHQEDDEV
AEVPDLPTISLPIGTSALPTFSFSSPLPPITTSTTSSSTPKTMPVTPAKETVTNKDPPKA
STPPCVPFTFSSPIVKATAASPPSFSPSAGFTFSAPVAKLGPSMSNGKLTTPIAATVKPA
TNKSTEDFEGPFKPAKTLKQGSVLDLLKAPGFASPVAQISPSSDAAPQQMSTQSTAPSST
STTSSSLTGSTGFGSLFKASTDWSCDACLVPNKSSDTKCVCCAAPQPNLSKSMDSKPSPA
TSVGQESSSSTNTTSTTTTTTGFGTVFSKPAGTWDCDTCLVLNKPDAVKCVACETAKPGT
GLKPSLTLPSAFSAVKTVSAPAAPVSTGFSGFGDKFKKPEGAWECDTCMVQNKAEDTKCV
ACTNPKPGASGGASSTVSSAPVFGLGDKFKKPEGTWDCDGCLLQNKAADLQCVACQAAKP
GASVEPKAFGSSGSSAGATSGSSTFGSSTSSSGGFKFGTSDSTLGSGGFKFGGSLSESSS
SSSSGGFKFGVPFGSSSSETTSKDTTASSGFKFGSSSEGFKFGAVSSDDKKSDQPAAGSG
FKFGVSGGIAFGTGSSSTESNSSKSGFTFGLSKPEEKTSDATTTSSSTVTFIPPSSQEKS
DSVASSNDPTSTNTNSTTTTTTTTGSVFGRLGESTNSPQGASTFGSLQAGKEPAAPTFTF
GKPEEKKEAAASSAPSAFLFGGASKDADAAPAPAATGGFSFGKPSAPAEQPPPAFTFGKP
ADKSKTSTSEAPKPSFTFGQSAADSAAAPKPAFSFMASNPTNTTNSTTSLSSTPTPSLFG
TTATTTSSSSSSTPAPAPSAAPSTFMFGQPAAASSDAPPAKAFLFGQSQDSQPPAPSAAP
LNSAPAPAPAQPFIFGASANAAPPAAAAPSFGFGATAPSAASSSAASTAPSPFAFSSAPS
SGFGANQTPSFGSSFGSPFPATPSQAPAFGAKPNSAPVFGQQTNSTPVFGAAANAAPGGG
FQFGGASAFGATNNASGVFTFGAGSAASPAPPANPSIAPQSGAPGGGFNFTQPPTFNIGS
VKSFTASPAGQQAIAGRKIKTAVRRRK
NT seq
4584 nt
NT seq
+upstream
nt +downstream
nt
atgacagctatccggcgccgaaacaccgatagacactcagacgaaagagccatggcggcc
acgggtggagggaaaattagaagcaggagatatcatatcgcctctaaaccttacgccaag
agtaaacagcagtcaggcctcatcagtcgagtgacagacacagtaaagagcatcgttcct
tcctggctgcagaaatactttaagaatgaagatgctcccgaaggaggagaggctgtacaa
gggccaaacaggaactgccagccacctcctcctcctaatggcagcgaagagggacctcct
cccctcgatggacgtgactccccagagcctagcaccagtaacacagagccctcaaccagc
cgagcatccctgaactttcaggagtatgtactctcacggcctcctctgagtcgctctcac
ctccactttaccccgctggatccctctgccccaaccctgggggcctccagcagcctcttc
tcacagccttccacctcctcagccccggggcctttttctacaggcttctccttggtgaaa
gaaatcaaggacaacctctcacagcacgaagatgataacatctccaccacaagcggattc
tcctcccgtgcatctgacaaagatgtccccacttccaaaacggcatcacttcctcagctt
tggtccccggagacagacagaacaaactgtgggcctcagccctcccagtccagtctgaaa
aagcctgctttcaacctgtctgtctttggaacctcctccagttcgacattaaacagcaca
gtgctgaactccagccagcttggagattcacccttctaccctgggaagaccacgtatggt
ggagcagctgcagtcagaagcttccgtactcgccctggaacaccataccaggctccagtg
aggagacagatcaaggctaagcctgctggtgctcagccttgtggggtgaccagcgccaca
gccagacgcattctgcagtccttggagcgcatgtcgagcccgctggccgatgccaagaga
atccctgcggcagcttcatcacccctgtccccatcaatggatggcataaatctagatcct
tcacatttccagcccaaaaagaaacggatggagtcaaccctcccaccggtgcagaaactt
atggttcctgccacagcatcagtgtcaggaaatcgctctgtgtccttcagggccactttg
acccctggaggagtgagccgaactctggacaggaccacaagagagacacagacaagacaa
tcaccgcaactacctgaagcaacccctggtccatcacaaagcacaatgggttccagcggc
ccagcctatcctctgtccagcacacctgcagccagcagtgtggggtctggaggcggcaaa
atgaagagagagaggagcagtgcacgaccctcctccaaacatcaagaagatgatgaggtg
gctgaagtaccagacctcccaaccatttcacttcccattggcacgtctgccttgcccacc
ttcagcttctcctctcccctgccccctatcaccacctccacaacttctagctccaccccc
aagaccatgcctgttactcctgctaaggaaacagtaacaaataaggatccaccaaaggcc
tcaacacccccatgtgtaccttttacattttcctccccaattgtcaaagccactgctgct
agcccaccttccttttccccttctgctggatttactttcagcgcccctgtggcaaagtta
ggtccctccatgtcaaatggaaagctgaccacacccatagcggcaacggtgaagccagca
acaaacaaaagcacagaagactttgaaggacctttcaaaccagccaaaaccctgaagcag
ggcagcgtgctggatcttctcaaagcacctgggtttgcctctcctgttgctcagatttcc
ccaagctcagatgctgcaccccagcagatgtctacacaatccactgccccctcctccacc
tctacaacctcctcctccctcactggatcaacagggttcggtagtttgttcaaagcgtca
acagactggagctgtgatgcctgcttggttccgaacaagtcatcagatacaaagtgtgtt
tgctgtgcagccccacagcctaacttatccaaatccatggacagtaaaccatctcctgcc
acctcagttgggcaggaaagcagcagcagcacgaacaccacctccaccactacaaccaca
acaggttttggcacagtgttttccaaacctgcaggaacctgggactgtgatacttgtctt
gttctaaacaaacctgatgcagtaaagtgtgtggcctgtgaaacggccaaacccgggaca
ggcctcaaaccctctctgactcttccttctgccttctcagctgtaaagactgtatctgcc
cctgcagctccagtttctacaggattcagtggatttggagacaaattcaaaaaacctgag
ggtgcatgggaatgtgatacatgtatggtacagaacaaggcagaggacactaagtgtgtg
gcctgcacgaaccctaaaccaggagcttcaggaggagcctcctcaacggtcagcagtgcc
ccagtgtttggacttggagacaagttcaagaagccagagggaacctgggattgtgatggc
tgtcttctacagaataaagctgctgatttgcagtgtgttgcctgtcaggcagccaaaccc
ggagctagtgtggagcccaaggcctttggttcttcaggttcctcagctggtgcgacttca
ggctcctctacttttggctcttctacctctagttctggaggctttaagtttggcacatca
gacagtactttgggatctggaggtttcaagtttgggggctcgctttcagaatcatcttct
tcttcttcatcaggtggatttaaatttggagtcccatttggaagctcctcatcagaaacc
acttctaaagacactactgcctcatcagggttcaaattcggcagctcatctgagggcttt
aaatttggggctgtctctagtgatgacaaaaagtcagaccagcctgctgcaggttctggg
tttaagtttggagtaagcggcgggatagcgtttggaactggatcatctagcacagaaagt
aactcttctaagagtggtttcacctttggactgtcaaaacctgaggagaaaacatcagat
gccaccacaacctcctcatccactgttacttttattcctccttcgtctcaagaaaagagt
gacagtgtggcatcttcaaatgaccccacatcaacaaacaccaactcaaccaccacaaca
acaaccacaactgggtctgtatttgggagactgggtgagtcaaccaactcaccacaaggg
gcttctacgtttggatccttacaggcagggaaggagccggctgctcccacctttaccttt
gggaagccagaagaaaagaaggaagcagctgcctcctcggctccatctgccttccttttc
ggtggtgctagtaaggatgcagatgctgcaccagcaccagccgccacaggaggcttttcc
ttcggcaaacccagcgctccagcagaacagcctccaccggctttcacttttggcaagcct
gcagacaagagcaaaacttccacttcagaggccccaaagccctccttcacttttggacaa
agtgctgcagattctgctgctgctccaaaaccagcattttcatttatggctagtaatcct
accaacaccacaaactccaccacctcattgtcctctaccccgacgcccagtctgttcggc
accaccgccaccaccaccagcagcagctccagctccacaccggctccagctccttctgca
gctcccagtactttcatgttcggtcagcctgctgcagcctccagcgacgctcctccagct
aaagcgttcctctttggccagagtcaggacagccagccacctgccccgtcagctgctcct
ctgaactcagctccagccccggctccagctcagcccttcatctttggtgcttctgccaat
gctgctcctcctgctgctgctgctccctccttcggttttggagcaacagcaccctctgct
gcctcttcttcagctgcatctacagctccctccccgtttgcattcagctcagccccctcc
agtgggttcggggccaaccagactccttcattcgggtcctcctttgggtcccctttccca
gccacaccttctcaggccccggcctttggggccaaacccaactccgcccctgtctttgga
cagcagaccaactccacgcctgtatttggggcggctgctaatgctgcaccaggtggagga
tttcagtttggaggagccagtgcatttggagctacgaacaacgcctcaggtgtgtttacc
tttggagccggatcagctgcctctcctgccccccctgccaacccctccatcgcaccccag
tcaggagcccctggaggtggattcaacttcacacaacccccgacattcaatattgggtcg
gttaaatccttcactgcctctccagctggacagcaagcaattgctgggcgcaagatcaag
acagcagtgcggcgcagaaagtag
DBGET
integrated database retrieval system
