Amphiprion ocellaris (clown anemonefish): 111563857
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Entry
111563857 CDS
T06018
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
111563857 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111563857 (irf1b)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
111563857 (irf1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
111563857
NCBI-ProteinID:
XP_023118897
Ensembl:
ENSAOCG00000014856
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All DBs
Position
14:5571733..5575726
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AA seq
291 aa
AA seq
DB search
MPVTRMRMRPWLESMIESNDISGLTWLDKEKTMFSIPWKHAARHGWELDKDACLFKKWAI
HTGKYAEGQTCDPKTWKANFRCAMNSLPDIKEVKDKSVNKGHQAVRVFRMLPSTPKSRDK
RSKAREAKPRRKSSMVKMEEDTDYSDTQSSTPPSPQEDMQENTVDSTVQIDQQDLSIVSP
CEVPDWSSSVEIGPDSFSHRFEVSPEHDCDDYDEIIQICQQLESETQWMPNSSDYKGFLN
NDACTSPESLWSDSSSVDELDSTPQYTTLVSDFTSPTDDFWSLYKQLNLSQ
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgacaaggatgaggatgaggccatggctggagagcatgatcgagtccaacgat
atctctggtctgacctggttggataaggaaaagacgatgttttcaattccctggaaacac
gcagcccggcacggctgggagctggacaaggatgcatgccttttcaaaaaatgggcaatt
cacacagggaaatatgcggagggccagacttgtgaccccaaaacatggaaagccaacttc
cgctgtgcaatgaactccctgcctgacatcaaggaggtgaaagacaagagtgttaacaaa
ggtcaccaagccgtgcgtgtcttcaggatgctgccttcgacaccgaaatctagagataaa
cgaagcaaggcgagggaagcaaagccgaggaggaagagctcgatggtgaagatggaggaa
gacacggactacagcgacactcagtcttccactcctccatcaccacaagaggacatgcaa
gaaaacacagtggacagcacagtgcagatcgaccagcaagatttgtccattgtttctcca
tgtgaggttcctgactggtcttcgtcagttgagatcggccctgacagcttctcccacaga
tttgaagtttcgcctgagcacgactgtgatgattacgacgaaatcatccagatttgccag
caactggagagtgaaacacagtggatgccaaacagttcagactacaagggtttcctgaac
aatgacgcatgcaccagtccagagagcctttggagtgactcttcttcagtcgacgaacta
gacagcacgccacagtacacaactttggtctcagacttcacaagcccaacagacgacttc
tggagcttgtacaaacagctcaatctcagtcaatga
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