Amphiprion ocellaris (clown anemonefish): 111563858
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Entry
111563858 CDS
T06018
Symbol
vegfc
Name
(RefSeq) vascular endothelial growth factor C isoform X1
KO
K05449
vascular endothelial growth factor C/D
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
aoce04510
Focal adhesion
aoce04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111563858 (vegfc)
04020 Calcium signaling pathway
111563858 (vegfc)
09133 Signaling molecules and interaction
04518 Integrin signaling
111563858 (vegfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111563858 (vegfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
aoce04052
]
111563858 (vegfc)
Cytokines and neuropeptides [BR:
aoce04052
]
Cytokines
Growth factors (RTK binding)
111563858 (vegfc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
CXCXC
Shell_matrix-like_N
Membrane_MLC1
Motif
Other DBs
NCBI-GeneID:
111563858
NCBI-ProteinID:
XP_023118893
Ensembl:
ENSAOCG00000001855
UniProt:
A0A3Q1BZS1
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All DBs
Position
4:complement(25378410..25421657)
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AA seq
422 aa
AA seq
DB search
MHLLGISLLLAYLICTNLATDFSHSDYYEYYEQEQMDEADSPPKSDMEQKLRSASSVDEL
MSLIYPSYWAALKCTSKLSTAVASTASKVSQRPQPPLLRPLADPEESTFAAAYLNLDVLK
SIESEWRKTQCMPKEVCVDVGREFGAPTNIFYKPPCVSVYRCGGCCHSEDKQCKNISTGY
LSKTLFEITVPITQGTKPVTISVANHTQCSCLSKLDIYKQVHSIIRRSLPECPIANRTCP
PGQMWSSSQCRCVNTATYMQLNTPPLPLPPPRPSQQHLDIFSADVCGPDKELDMESCQCV
CRRRDETYDCGPNRHLNHNTCQCVCNMIPPPSCPLNYIFNKDTCQCTCSKTCPRHQPLNK
TKCSCECNESPNKCFLKGRRFHHATCSCLRPPCEVRRRRCEPGFFFSEEVCRCVPSHWRR
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcctgggaatatctcttctcctggcatacctcatctgcactaacctggccacc
gacttcagccacagtgactattatgaatactacgagcaggagcagatggacgaggcggac
tccccaccaaagtcagacatggaacagaagttgcgttcagcctccagtgtagatgaactg
atgagtctgatctatccttcatactgggctgctctcaagtgcacatccaaactttctact
gctgttgcttctacggcctctaaagtctcccagcgtccacaacctcccctactgagaccg
ctggcagatccagaggaatcaacatttgctgctgcctacctcaacttggatgtcctcaaa
agtatagagtcagagtggaggaagactcagtgcatgcccaaagaagtctgtgtcgacgtg
ggaagggagttcggggctcccaccaatatcttctataagccaccctgtgtgtctgtctac
agatgtggaggatgctgccactctgaggacaaacaatgcaagaatatctccactggctac
ctcagtaaaactctatttgagatcacagtaccaatcacccaaggcaccaagccagtgacc
atcagtgtggccaaccacacccagtgcagctgtctgtccaaactggacatctacaaacaa
gttcacagcattatcagaagatccctgcccgaatgcccaatagccaataggacgtgtcct
cccggtcagatgtggagcagcagtcagtgtcggtgtgtcaacacagccacctatatgcaa
ctcaacacccctcctctaccactgccacctccaaggccatcccagcagcatcttgacata
ttttctgcagatgtgtgtggcccagataaggaactggacatggaaagctgtcagtgcgta
tgtaggcgtagggatgaaacttatgactgtgggcctaaccgacaccttaatcacaacaca
tgtcagtgtgtctgcaacatgatacctcctccatcctgccctctgaactacatctttaac
aaggacacctgccagtgcacgtgtagcaagacgtgtccgaggcaccagcccctcaacaag
acaaagtgttcctgtgaatgtaatgagtcaccaaataagtgtttcctaaaaggacggagg
tttcaccacgccacatgcagttgtctcaggcctccctgtgaagtaagaaggagaaggtgt
gaaccaggtttcttcttcagtgaggaagtttgtcgctgcgttccatcccactggagacgg
ctggactaa
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