Amphiprion ocellaris (clown anemonefish): 111563925
Help
Entry
111563925 CDS
T06018
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111563925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111563925
03016 Transfer RNA biogenesis [BR:
aoce03016
]
111563925
03012 Translation factors [BR:
aoce03012
]
111563925
04131 Membrane trafficking [BR:
aoce04131
]
111563925
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111563925
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
111563925
Transfer RNA biogenesis [BR:
aoce03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
111563925
Translation factors [BR:
aoce03012
]
Eukaryotic type
Elongation factors
111563925
Membrane trafficking [BR:
aoce04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
111563925
Exosome [BR:
aoce04147
]
Exosomal proteins
Proteins found in most exosomes
111563925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
111563925
NCBI-ProteinID:
XP_023118968
Ensembl:
ENSAOCG00000022039
LinkDB
All DBs
Position
15:30331093..30335072
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAGEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVSAGV
GEFEAGISTNGQTREHALLAYTLGVKQLIVGVNKMDYTDPPYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEASEKMSWFKGWKIERKEGGATGTTLLEALDAIQPPTR
PTDKPLRLPLQDIYKIGGIGTVPVGRVETGVLKPGMVVTFAPPNLTTEVKSVEMHHESLP
EALPGDNVGFNIKNVSVKEIRRGNVAGDSKNDPPKGAVNFNAQVIILNHPGQIANGYTPV
LDCHTAHIACKFTELIEKIDRRSGKKLEDGPKFVKSGDAAIVKLIPQKPMVVESFSNYPP
LGRFAVRDMRQTVAVGVIKEVEKNDISGKVTKSAQKAEKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcattggccatgtcgactctggcaag
tccaccaccaccggccacctgatctacaagtgcggaggaatcgacaagagaaccatcgag
aagtttgagaaggaggccggtgagatgggcaaaggttccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccatcgatatcgctctgtggaagttc
gagaccagcaagtactacgtgaccatcattgatgcccctggacacagggacttcatcaag
aacatgatcactggaacatctcaggctgactgcgctgtgctgatcgtctctgctggtgtt
ggtgagttcgaggctggtatctccacgaacggtcagacccgtgagcatgccctgctggcc
tacactctgggtgtgaagcagctcatcgttggagtcaacaagatggactacaccgatccg
ccttatagccagaagcgttatgaggagatcaccaaggaagtgagcgcctacatcaagaag
attggctacaaccctgcaactgttgctttcgtgcccatctctggatggcatggagacaac
atgctggaggccagtgaaaagatgagctggtttaagggctggaagatcgagcgtaaggag
ggcggagccacaggaaccaccctgctggaggctctggatgccatccagcccccaacccgc
cccaccgacaagcccctccgtctgcccctgcaggacatctacaagattggcggtattgga
actgtccccgtcggccgtgttgagaccggtgttctgaagcccggcatggtcgtcaccttt
gctccccccaacctgaccactgaggtcaagtctgtggagatgcaccacgagtctctgcct
gaagctctgcccggtgacaacgtcggtttcaacatcaagaacgtttccgtcaaggaaatc
cgtcgtggaaacgtggctggtgacagcaagaacgacccacccaagggtgctgtcaacttc
aacgcccaggtcattatcctgaaccaccctggacaaattgccaacggttacacccccgtg
ctggactgccacaccgctcacattgcctgcaagttcaccgagctgatcgagaagattgac
cgtcgttctggaaagaagcttgaggatgggcccaagtttgtcaagtctggagacgccgcc
attgtcaaactgatcccacagaagcccatggttgtggagtccttctccaactaccctccc
cttggtcgtttcgctgtgcgtgacatgaggcagactgtggctgtcggtgtcatcaaggag
gttgagaagaatgacatttccggaaaggtcaccaagtccgcacagaaggctgaaaagaag
aaatga
DBGET
integrated database retrieval system
