Amphiprion ocellaris (clown anemonefish): 111564064
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Entry
111564064 CDS
T06018
Symbol
tdrd12
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111564064 (tdrd12)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
111564064 (tdrd12)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111564064 (tdrd12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Helicase_C
CS
Motif
Other DBs
NCBI-GeneID:
111564064
NCBI-ProteinID:
XP_023119178
Ensembl:
ENSAOCG00000016463
LinkDB
All DBs
Position
3:25248152..25280976
Genome browser
AA seq
1457 aa
AA seq
DB search
MQELSIVKIENPSCLWGRVVWGSGADTKTTDHYNNMLSQMNLFYHDITQDLRKLKPTSLE
EGQVCVVYWAAIKSWCRAVVESIYMDSISCQACCRLVDHGERLVISLDQIRLAVPNFLQL
PFWVRKFHLAGIKPTTLQVSVFEEKAELIRSSQWDSSATLYLHNLLQASTQTEAVLLESE
SDSTSLELYLTIGNIKICVNEDLVAKKFAYYSRDSADSGGLDEWERLPVMLSSSILTQTV
STASNKLTTQSQPRPVTSQRPAAAGAVDWLTASSPHESQQHDLETSKRDYQVKITGQQLS
PSDQSSNGSDAADAAAAAESDPSEDTDSSLAAALAKNLNLFRLQKFLNSSSFFEQVAPSN
EELNDCRPKEMTATSNACAEGELFAPLHTSNPETSDEQALLHMSSGSEAESSQVGYLTAD
KTSSLSTSVESEQGDAEETQRSDEDWACSRLLEWLNPEPVNTDPDAAKDGVPPSDPSSSG
ILVHSAFPVEPCSSMADAPITDALRLVLGRKQYSTLSTADRYSWPAVARGCNTLIVSHNA
DQPLSYLPPLLTHILLNSIFSSVTSSSGPIAVLLCPGWEKVQEVFDLLEESNVARSLHPV
SVLLGIGKDEAKAFKIPKNCLLLVTTPFSLGRLLSCHSFLFLRLYHLVLDEADQLFTLAP
DQMVSILQHFRKVTSSEMTSSCPQQLVAIAKRWTSHMEGLLANHMPYPCIVIAVPQEAAF
YGNIQQITLMTLESSKISVLLGALDFNPDVGQKTLIVANSAQEAEDVFKAVSNKSAFCLK
LHEGLTHQFDFAIQQWRKDIGPGTHVILVTTNGCMKCLGIRDATCVVHCGFPTSPKLFGN
RLFCMAENFRNLSEQGQRESCPYVARSVLLISERNTRHIVGILRYLGRTNALLPPELLSF
AQGIHVAREDQKTNRPLCSYVKSFGVCRDSSLCPDRHRFISQLDQSDLPASGVIEVVPLY
IKTASVFYGRIVKKEDSRFDIMSSEMTSYYADKKPLAKELLEGGLYAVQEDNVFHRVKII
SVPDGHNCLFFSICVWYIDVGKEEEVKSYQVLHLPEQFHSLPGQAVEIIVCRVKPVDAEN
NWHPKVTRAISQKIRGLQHRGRAVLSLGNTVFVDPMVRVTQVPGVKTLINEYSIQSEILN
TGMGISNPEHLDLLRALCQEGPSGSCKEAEHTSRQEDGLPSLMVTVKPEENAFRVAEVTK
LAAQEAPHLKPCEPLSPVSSTDQSLVRAPSSPEVHQVPGYDQQTPLDSKADIGQRNISPA
IMRSAEEIESNKDGGELCPATNLAACQTPWENGLPEGADQSNHQQVISPDGADCDDSTKS
FHPQVRWYQTSDSVTLTVKLMNPENQRCDFYPDRVVYSGRVNGRSYRVDLELHQNIAADC
CYLQMNSNEPVLILVKQQQGYWERLVRNKNMLVSYDMEHIDDDDGDDEGKTPNGLWFVEN
AGEDNWYVHSESSSDSD
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattatcaattgtgaagattgagaacccatcttgcctctggggtcgggttgtt
tggggttctggtgccgacacaaagaccacagatcattacaacaatatgttgtcccagatg
aacctcttctaccatgacatcacacaggacctgcgcaagctgaagcccacatcgttagaa
gaaggacaggtgtgtgtggtgtattgggcagcgataaagtcatggtgtcgggctgtggtg
gagtcgatctatatggactctatatcctgccaagcttgctgccgcctggtcgaccatgga
gaacgactcgtcatctctttagatcaaatccgactggcagtgcccaacttcttgcagctg
cctttctgggtgaggaagttccacttggcaggaatcaaaccaacaaccctgcaagtgtct
gtgtttgaggagaaagcagagctcattcggtccagtcaatgggacagctcagccacactg
tatctgcacaacctgctgcaagcatccactcagacagaagctgtgttgcttgaatctgaa
tcagactctacctccttagagctctacctgaccattggcaatatcaagatctgtgtgaat
gaagacttggtggctaaaaagtttgcatattacagcagagattctgctgacagtggaggc
ctggatgaatgggagcggttgcctgtcatgttgtcctccagcatcttaacccaaaccgtc
tccacagcctcaaacaaactaacaacgcaaagccaaccacgtccagtgacatcacagaga
ccagctgcagctggtgcagttgattggctgacagcttcctctccacatgagagccaacag
catgacctagagacctcaaagagagactatcaagtaaagatcacaggacaacagttgtct
cccagcgaccaatccagcaatggctcagatgctgcagatgctgcagctgctgcagagagt
gacccatcagaggacaccgactcttctctagctgcagctctggctaaaaatctcaatctg
ttcaggctccagaagtttctgaattctagcagtttctttgaacaggtagcccccagtaat
gaagagctgaatgactgtcgacctaaggagatgactgcaacctcaaatgcctgtgcagaa
ggagaactatttgcccctttacacacgagtaatcctgaaacatcagatgagcaagcattg
ctccatatgagcagtggaagtgaagctgagagcagtcaggttggatatctgactgcagac
aaaacaagcagtttaagtacatcagtagagtcagaacaaggagacgcagaggagacccag
aggagtgacgaggactgggcctgttcacgccttttggagtggttgaacccagagcctgtg
aacaccgatccagatgctgcaaaagatggggtacctcccagtgatcccagtagcagtggg
attctggtgcactctgctttcccagtggaaccctgtagcagcatggctgacgcccccatc
acagatgctctccgcttggtgttagggagaaagcagtacagcactttatctacagctgac
cgttacagctggccagctgttgctcgaggatgcaacactctgattgtttcccacaatgct
gaccagccactgagctacctccccccacttctcacccacattttactcaactccatcttc
tcctcagtcacctccagctcagggcccatagcagtgctgctgtgtccaggctgggagaag
gtccaggaagtgtttgacctgctggaggagagtaatgttgcccggagcctccatcccgtc
agtgtgctgctcggcattggcaaagatgaggccaaggccttcaagatccccaaaaactgc
ctgctgttggtgaccactcctttctctctgggtcgtctgctgtcttgtcactctttcctg
ttcctgcggctgtaccacttggtgctcgatgaagctgaccagctctttactcttgcacca
gaccagatggtgtccatcttgcagcatttccgaaaggtgacctccagcgagatgacatct
tcctgtcctcagcagctggttgccattgcaaaaagatggaccagtcatatggagggtttg
ttagccaatcacatgccatacccctgcattgtcatagctgtccctcaggaagctgctttc
tacgggaacattcagcagatcactctcatgactctggagagcagtaagatctcagtactg
ttgggtgcattggatttcaaccctgacgttggccagaagactctgatcgtagcaaactcg
gctcaggaggctgaagacgtgtttaaggctgtgagcaacaaatctgcattctgcctcaag
ctccatgaggggttaacacaccagtttgactttgccatccagcagtggagaaaagacatt
ggtcctggcactcatgttattctggtgaccaccaatggatgcatgaagtgtttgggcatt
agagatgcaacttgtgttgtccactgtggttttcccacctctcccaaactgtttggcaac
cgactcttctgcatggctgaaaacttcagaaacctttcagaacaaggtcaaagagagagc
tgcccttatgtcgcccggtcagtgcttctcatttcagaaagaaacacccgccatattgtt
gggattctgcgctacctaggacgaactaatgccctgctgcctcccgaactgctgtccttc
gctcagggcatacatgtggcccgggaagaccagaagacaaaccgccctctctgcagctat
gtgaagagctttggagtctgcagagatagcagtttgtgtcctgaccgtcacagattcatt
tcccaactggatcagtctgacctccctgcatctggagtcatagaagtggtgcctctctac
attaagacggcatcagtattctacggtcgtattgtcaagaaggaggacagtcgttttgac
ataatgtcctctgagatgacttcttattatgctgacaagaaacctttggccaaggagcta
ctggaaggaggcttatatgctgtgcaggaggacaatgtcttccacagggtgaagatcatc
tcggtgccagacggacataattgcctgtttttcagcatctgtgtgtggtacattgatgtg
ggaaaggaggaggaggtcaaatcttatcaagtccttcatctgccagagcagtttcactcc
ctgcctggccaagctgtcgaaattatcgtctgccgagtcaagccagttgatgctgaaaat
aactggcatcccaaggtcaccagagcaatcagccagaaaatccgaggcctgcagcatcga
ggcagagcagttctcagtctgggaaacactgtttttgttgatcctatggttcgggtcacc
caggtgccaggtgtgaaaacgctcataaacgaatacagcatccagtctgagatcctgaac
acagggatgggaatcagcaacccagagcatctggacctactgagggcactgtgtcaagag
ggtccgtctggcagctgcaaggaggcagagcacacctctaggcaggaggatggtttacca
tctctgatggtcacggtcaaacctgaagaaaatgctttcagagttgccgaggtcacgaag
cttgctgctcaagaagcccctcacttaaagccatgtgagccacttagtccagtatcttca
acagaccagtccctggtccgtgcaccatcatcacctgaagtccaccaggtaccaggctat
gatcaacaaaccccattggacagcaaggctgacattggacagagaaatatctcccctgcc
attatgaggtcagctgaggagatagagagcaacaaagatggaggagaactttgccccgca
accaacctggctgcctgtcagaccccctgggaaaatggtttgcctgaaggtgctgatcaa
agcaaccaccagcaggtcattagccctgatggagcagattgtgatgactcgactaaaagt
ttccaccctcaggtccgctggtatcaaacatccgactctgtgactctaacagtgaagctg
atgaacccagaaaatcaacgctgtgatttctaccctgaccgagtcgtttacagtggcaga
gtaaatggtcggtcctacagagtcgacttggagcttcaccaaaatatcgcagcagactgt
tgctacttgcaaatgaattccaatgagccagttctcatactagttaaacagcagcaggga
tactgggagagactcgtcaggaacaagaacatgcttgtcagttatgacatggagcacatt
gatgatgatgatggtgatgatgaaggcaaaacaccaaatggtctgtggtttgtggaaaac
gcgggagaagataactggtatgtgcattcagagagcagcagtgacagtgactga
DBGET
integrated database retrieval system
