Amphiprion ocellaris (clown anemonefish): 111564111
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Entry
111564111 CDS
T06018
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111564111
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
111564111
Domain-containing proteins not elsewhere classified [BR:
aoce04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
111564111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Calsarcin
Motif
Other DBs
NCBI-GeneID:
111564111
NCBI-ProteinID:
XP_023119231
Ensembl:
ENSAOCG00000014874
LinkDB
All DBs
Position
23:10212722..10233506
Genome browser
AA seq
1606 aa
AA seq
DB search
MGTGDYICVTLRGGAPWGFTLREGEGDTYRPFIVSQVEDDGRAFLAGIQEGDEVVSVNGE
PCADLTLLQAFDLIDTSIDCLQLLLKRYHSISSEDYESEGTYSDERASAGEASESTTLHI
FSPTHRSEIPRELYISESQDEAYCVELDSDIKVPEGPQLLCTELHISSSDDRSGQEPIFK
TNEDKVQRCFSSGEMVELQVSMSSQTLDDVGCTSLGSARGFEGEVSNREAVETINTTITA
SHYVPSSVREPLSQYGVVSSPSMQGQVEVIFQQQQQPAAASGAGRGILSVGGPRVSESVG
SQSEGEEGGRGHCEGVPGSFSVSFEIPPEDATAANEQDSDSEGDQDKPNKHRARHARLRR
SESLSEKQVKEAKSKCKRIALLLTAAPPNPNNKGVLMFKKHRQRVKKYTLVSYGTGEDEP
KSSDEEDEDNGDDKQETSTVEFTFVAPTDSEIDKHFFTNANSSKGVLTLNWDKGLLEIER
NLRNQTGMECLPETKGKGALMFAQRRQRMDEISAEHDELRRQGMPVEGVQEVEKKVMEHS
YMLSTTEGHAYMDVNIHQQSQQQYQQYQEQQYYEQQQNYQQQQQYQQQQQYQQQQQYQQQ
YQQQQQYEQRHYQQQQIYQPQQEYHQEQQQMQHYSTNINGTVQHQTTEMQSSFSNRTAKP
FTAENMVATPYSHAMSGTNQESVGQGEQIASRDERISTPAIRTGILLDTRRKTTGKPMFT
FKDAPKVSPNPALLNLLNRSDKKLGFESGPEEDYLSLGAEACNFLQSQRVKHKTPPPVAP
KPVINPNSPPWSAQLEATNQDMPQCAENSLSTPAVAPTAEATPAPELEPTPAPAPEPSPP
PAQQETPASTAPAEQQAWTLPEPESQQQPLQVAAQEANGHMNSALQSESSPVTSWGAAQT
QAQQQPPPNSWHPAQVHPQAPPPSESPPQPPWVTHQPPQNQVQLQPPTNSWSPQIQPTWA
QPHEQPQSQQQVQSPWTHPNEQAHLHQMQPAWGQAQEPVQPQPQVPWTQPSQTDSQPQPP
WVQQPQKQSQAQPPWAQQVQPESQSQLPWAQQPQPQHQAPQQTWQQAQAPGHPQPPWASI
QPQTSQQPSINAWPPSQTQAQAQPPWMQVAQPQPQAQPQANLNPWAPVPAQAQSQPSWAQ
QPPEHGQHHMNTWAQEQNQAQHQAQRQAQHQAQHQAPWAQPVLPQPSPQTNWQQPTSKSP
PMNTWPPAQTQPQTPVNTWTPQSQQAPVNVSMSTVNTRPSPKLWLQPQSAPQSRTPPSPP
QRMHSFTIGQRASSPINPMATVLNPSSQGSAFEMPAVRGKGADMFAKRQSRMEKFVVDSQ
TVEANKAVRSTSPAASLPNEWKYTPNVRAPPPRAYNPIQSPSYPPAATKQPPSSSPSTKA
KKKDKAKPAPAPKPLNVIDVMKHQPYQLNSSLFIFGPGAEAVKPASPKPSCSPPNPPVDN
QPVTYEQMAPVQPAGPFGAPYPQQPYGMPMQPMMHDGHYQQPQANIYPPPNPYQQPPGGP
YQQAYNQQYQQPAPPAYHPQAPQSPNNPYQQALPAAYQPANSPPYLATPSAPYQPQPASS
CIAPSFPVAARAESTSGGNTATAPKPKFTAKKSSAQVWKPTVADKE
NT seq
4821 nt
NT seq
+upstream
nt +downstream
nt
atgggcaccggggattacatctgcgtgacgctgcgcggtggtgcgccctggggattcacc
ctgcgagagggagagggagacacatacagaccttttattgtctcacaggtcgaggacgat
ggtcgtgccttcctggctggaatacaggaaggcgacgaggtggtctcagtcaacggggag
ccgtgtgccgatctcacccttttacaagcgtttgatctcattgacacatcgatcgactgt
ctgcagctgcttctcaaaagatatcactccatctcctctgaagactatgaatctgaaggg
acatacagtgatgagagggcctctgctggtgaggcttcagagagcaccaccctccatatc
ttctccccaacgcacaggtctgaaatcccaagagaactctacatatctgagtcccaggat
gaggcttactgtgtggagctggacagtgatattaaggtccccgaaggaccccagttgctt
tgcactgagctacatatttcctcgtctgatgatcgaagtggccaggagcccatttttaag
acaaatgaggacaaagtgcagcgatgcttctcctcaggggaaatggtggagctccaggtg
tccatgtcttcgcaaaccttggatgacgtgggttgcacctctcttggaagcgctcgtggg
tttgaaggggaagtctcaaacagagaagctgttgagaccatcaataccaccatcaccgca
tcacactatgtgccatcttctgtcagagagccgctcagccagtatggagtggtcagctca
ccctccatgcaggggcaagtggaggtcatttttcagcagcagcagcagccggcagcagca
tccggagcagggaggggcatcctgagcgtgggtggccccagggtcagtgaaagtgttgga
tcccaaagtgaaggagaagaaggaggcagggggcactgtgagggtgtccctgggtccttt
agtgtctcatttgaaattcccccagaagacgcaacagcagcaaacgagcaggactcggat
tctgagggggatcaagacaaaccaaacaagcatcgggcaaggcacgccaggctcaggcgt
agcgagagtctgtctgagaagcaggtgaaggaggccaagtccaaatgtaaacgtattgct
ctccttcttacggccgctccacccaaccccaataacaagggggttttgatgttcaagaag
catcgtcagagggtcaagaaatacacacttgtaagctacggcacgggagaagacgagcca
aagtccagcgacgaagaggacgaggataacggagacgacaagcaagaaacttcaactgtt
gaatttacctttgtggctcctactgattctgaaatagacaagcattttttcactaatgcc
aacagtagcaaaggagtgctaactttaaactgggacaaaggtctcctcgaaattgagagg
aacttgagaaaccaaacagggatggagtgtttgcctgaaaccaaaggaaagggtgccctc
atgtttgcccagcggcgtcagagaatggatgagatttctgctgagcacgatgagcttagg
cgccaagggatgcccgttgaaggagtgcaggaggttgaaaagaaggtgatggagcactcc
tacatgctgtccacaacagagggccatgcttatatggatgtaaatatacaccaacaaagc
caacaacagtaccagcaatatcaagaacaacagtactatgagcaacaacagaactaccaa
cagcagcaacaataccaacagcaacaacaataccaacagcaacaacaataccaacaacaa
tatcaacagcagcagcagtatgaacaaaggcattatcagcaacagcaaatttatcagcca
cagcaagaatatcatcaagagcaacagcaaatgcagcactattcaacaaacatcaatggc
acagtgcaacatcaaaccactgaaatgcagagttctttcagcaatcgtactgcaaagcca
ttcacagcagaaaacatggtcgctactccttattctcatgcaatgagtgggaccaatcaa
gagtctgtgggtcaaggagagcagatagcatcccgtgatgagcgcatttcgactcccgca
attaggacaggcattttgttggatacaaggagaaagactactggcaaaccaatgttcact
tttaaagacgccccaaaagtatcacctaacccagcattgctgaatcttctcaacaggagc
gataaaaagttgggttttgagtcaggacctgaggaagactacctgagccttggggctgag
gcttgtaattttctccaatctcagcgagttaaacacaagactcctccaccagttgcccca
aagcctgtgatcaaccccaactctcctccttggtctgcgcagttagaagcgaccaaccag
gacatgcctcagtgtgctgaaaatagtctgtccacacctgctgtagcccccaccgcagag
gctactcctgctccagaactagagccaacccctgcacctgcccctgagccctctccccct
cctgcccaacaggagactcctgccagcaccgccccagcagaacaacaagcatggactctt
ccggagcctgaatctcagcaacagcctctgcaagtggcagctcaggaggcaaatggccat
atgaattctgctctgcagtctgagtcttctcccgtgacttcctggggtgcagcacaaaca
caagcacaacaacagccacctcccaattcttggcatccagctcaggtgcatccccaggca
ccacctccaagtgagtctccaccacagccaccttgggtgacacatcagcctcctcagaac
caagtacagcttcaacccccaacaaattcttggagcccccaaatacaacctacctgggct
caacctcatgagcagccacagtcccagcagcaggttcagtcaccctggacacatccaaat
gaacaggcccacctacatcaaatgcagccagcctggggtcaagctcaagaaccagtgcag
ccgcagccccaggtcccatggacacagccatcccaaacagactctcaacctcaaccacca
tgggtgcaacaaccccagaaacaatctcaagcacaacctccttgggctcaacaggttcag
ccagaatcccaatcacaactgccgtgggctcagcaaccacaaccacagcatcaggctcca
caacaaacgtggcaacaagcccaagcaccaggtcatcctcaaccgccttgggcctcaatt
cagcctcaaacgtctcagcaaccttcaattaatgcatggcccccatcacaaacccaagcc
caagctcagcctccttggatgcaagtagcccaaccacaacctcaagcacagcctcaagcc
aatttaaatccatgggcacctgtacctgcccaggcccaatcccaaccttcatgggctcag
caacctccagaacatggtcagcaccacatgaacacttgggcccaggagcaaaatcaggcc
caacatcaggctcaacgtcaggctcaacaccaggcccaacatcaggcaccttgggctcag
ccagttctaccccagccctcaccacagacaaattggcaacagcccacttcaaaatctcca
ccaatgaacacatggcctccagctcaaacacagcctcagacacctgtgaatacttggaca
ccgcagtcacagcaagcgcctgtgaatgtttcaatgtcaacagtgaacactcgaccctct
ccaaaactttggcttcaaccacaaagtgccccacaaagccggacccctccttctccacca
cagcgaatgcactcttttactattggtcaaagagcttcatcacccatcaacccaatggcc
actgtcttaaacccatcttcccaaggttcagcttttgagatgccagctgtcagagggaaa
ggagctgatatgttcgccaagaggcagtctcgtatggagaagtttgttgtggactctcag
actgtggaagcaaacaaggcagtccggtcaacgtcaccagctgcttccttaccgaatgag
tggaaatatactcccaatgtacgtgctccacccccaagggcatacaatcctattcagtct
ccatcttatccccctgcagcaacaaagcaacccccttccagtagcccatcaaccaaagca
aagaaaaaagacaaagcaaaaccggcccctgcccctaaacctcttaatgttatagatgtc
atgaagcatcaaccctatcagctaaattcctcactctttatctttggccctggagcagag
gctgtcaaacctgcttcacctaagcccagctgttcacctcctaatccgcctgttgataac
cagccagttacatatgagcaaatggctccggttcagccagctggaccatttggggcccca
tacccccagcaaccgtatgggatgcctatgcagcctatgatgcatgatggccactatcag
caaccccaagctaatatttatcctccccctaatccttatcagcaaccacctggtggtcca
taccagcaagcatataaccagcaatatcaacaacctgccccacctgcttatcatccccaa
gcccctcagtctccaaacaatccctaccaacaggcattgccggctgcttaccagccagcc
aacagccctccctatctggcaactccttctgcaccttaccagccacagcctgccagtagc
tgcattgctcctagttttcctgtggctgctagggctgaatctacatctggtggcaacact
gcaactgctcctaagcctaagtttacagcaaaaaagagctctgctcaggtgtggaagcct
acagtagctgataaagagtga
DBGET
integrated database retrieval system
