Amphiprion ocellaris (clown anemonefish): 111564159
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Entry
111564159 CDS
T06018
Symbol
sox1a
Name
(RefSeq) transcription factor Sox-1a
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111564159 (sox1a)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
111564159 (sox1a)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
111564159
NCBI-ProteinID:
XP_035801018
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All DBs
Position
11:1240096..1260851
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AA seq
287 aa
AA seq
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MYSMMMETDLHSPGPQTNTTTGQTGPNSGSKANQERVKRPMNAFMVWSRGQRRKMAQENP
KMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDK
YSLAGGLLSGPSGGGGVGLGVGMSSSGVGQRLESPGGHGGSASSGYAHMNGWANGAYSGQ
VAAAAAAAAMMQEAQLAYSQHPGSGAHHHHHSHHHHSHNPQPMHRYDMTALQYSPISNSQ
SYMNASPSGYGGITYTQHQGSGVSSSAAMGTLGSLVKSEPSISPLLE
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcatgatgatggaaactgaccttcattcccccggcccccaaacgaacacgacc
acggggcaaacggggccgaatagcgggtccaaagcgaatcaggaacgcgtgaagagaccg
atgaacgcgttcatggtgtggtcccgtgggcagcggagaaagatggcacaggagaatccc
aaaatgcacaactctgagatcagcaagcggctgggcgccgagtggaaggtgatgtccgag
gctgagaagcgtcctttcatcgacgaggcgaaacggttacgagccatgcacatgaaggag
catccggattacaagtaccggccaagacggaagaccaagacgttgctgaaaaaggacaaa
tattccctggccggtggactgctttctgggcccagtggtggcggtggagttggtttaggg
gtcggcatgagttcatccggggtcgggcagaggttagaaagccccgggggtcacggaggc
tcggccagctctggctacgcgcacatgaacggctgggcgaacggtgcgtactcggggcag
gtggctgcagccgcggcagccgctgcgatgatgcaggaggctcagctagcctacagccag
cacccggggagcggagcgcaccaccaccaccactcacaccaccatcactcacacaacccc
cagcccatgcaccgctatgacatgacggccctgcagtacagccccatctcgaactctcag
agctacatgaacgcttctccatccggctacggcgggatcacctacacacaacaccagggc
tccggcgtctcctcttcagctgccatggggacgttagggtcgctggtgaagtcggagccg
agtatttctccgttgttggaatag
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