Amphiprion ocellaris (clown anemonefish): 111564351
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Entry
111564351 CDS
T06018
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111564351 (ythdc1)
Spliceosome [BR:
aoce03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
111564351 (ythdc1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
111564351
NCBI-ProteinID:
XP_023119626
Ensembl:
ENSAOCG00000000239
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All DBs
Position
17:33748337..33762020
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AA seq
680 aa
AA seq
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MAADRREDKDGELNVLEDLLTEAPDQDDELYNPETERDISDKKGTKRKSERSDSQDLKRL
RPSSSHAPSRSSSTNKRAPGPHLSSSKKVLSPRGRHAATYRHEYYEERKGRRGTREATRS
RGDDGRRRESQRGLEGLSQKLRRDERQASPSPHEEGNQSEEEAAAEYGSEPASGSSSPAA
SHVENEDEDDQEDEEEDEDEEGMEEEDEEEEEEEEEGEKEEDEEEDEYERRGGEGNDYDT
RSEAGDSRSASSVSFSDDGESARSGSASEGSGSEKKREKLSSSVRAVRKGMENPTSKLRY
ILRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSARSVVLVFSVRESGKFQ
GFARLASESHHGGSPIHWVLPAGMNAKMLGGVFKIDWLCRRELPFIKTAHLSNPWNEHKP
VKIGRDGQEIQPDVGAQLCALFPLDESVDVHQVARRVRHKRRTPSEPRPRGRPPQREPGR
RRPEEYDIHGRKRPRADGPPDFSQRAGFIQDLRNQPVDRRFSSVRRDVFLNGSYNDYMRD
YHHSVGPPAPWQTLAAYPGVEQPPTHHPPYYHHSHPPPPPHQAYHHHHHPPLPPHEAPPP
RFRDKQRVPQHRAFTSSPHDYDMRVDDFLRRTQAVVSSRRERERQRERERGGPRRDRERE
RARDRDRERERDKERGRYRR
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgaccggcgcgaggacaaagacggagaactaaatgttctggaggatctgctg
actgaagctccagatcaggacgatgaactctacaacccagagacagaacgagacatcagc
gacaagaaaggaacaaagaggaagagcgagcgctccgacagccaggacctgaagaggctc
cgcccctcttcgagccacgccccctccaggtcgtcctccaccaataagagagccccgggg
ccccacctgtcatcctctaagaaggtgttgagtcctcgcggacgccacgctgccacctac
cgccatgagtactacgaggagcgtaaggggcggcgtgggacccgagaggcaaccaggagc
cgaggagacgacggccgacggagagaatctcagagaggcctggagggtctgagccagaag
ctgcggcgtgacgagcggcaggccagcccttccccccatgaggagggcaaccaatcagag
gaggaggcggcagcggagtacggctcggagccggcgtcaggaagctcctcccctgccgcc
tcccacgtcgagaatgaagacgaggacgatcaggaggatgaggaggaggacgaggacgag
gagggtatggaggaggaagatgaggaggaagaggaagaggaggaggagggagagaaggag
gaggacgaggaggaggacgaatacgaacggcgaggaggcgaaggaaacgactacgacacc
cgcagcgaggctggagattcgcgctccgcctcctcagtcagcttctctgatgacggcgag
tcggcacgctctggctccgcttctgagggctcaggctcagagaagaagcgggagaagctg
tcgtcgtcagttcgagccgttcgtaaagggatggagaatccgaccagcaagctgcgctac
atcctgcgagacgctcgcttcttcctaatcaagagcaataaccacgagaacgtgtcgctg
gccaaagcaaagggcgtttggtcgacactgccggtcaacgagaagaagctgaacgcagcg
ttccgctcggctcggagcgtcgtcctcgtcttctctgtgagggagagcggcaagttccaa
ggttttgctcgtttggcatcggagtctcatcacggcggctctccgatccactgggttctt
cctgccgggatgaatgctaagatgctgggtggtgtcttcaagatcgactggctctgcaga
agggagctcccgttcataaagaccgcccacctgtccaacccctggaacgaacacaagccg
gtgaagattggacgagacggacaggagatccagccggacgtcggagctcagctctgcgcc
ctgttcccattggacgagagcgtggacgtccaccaggtggctcgccgtgttcgtcacaaa
cgccggacgccgtcggagccgcgaccccgaggcagaccaccacagcgagagccgggaagg
cgtcgacctgaagagtacgacatccatggcaggaagcggccgcgagccgacggtccgccc
gacttcagccagcgagcaggcttcattcaggaccttcggaaccagccagtggacagacga
ttttccagcgtgagacgagacgtttttctcaacgggtcctataatgactacatgagggat
taccaccacagcgtcggtcctccggctccctggcagactctggcggcgtatcccggcgtg
gagcagcctccgacccaccaccccccgtactaccaccacagccaccccccgcccccccct
caccaggcgtaccaccaccaccaccaccctcccctaccaccacacgaggctccgccccct
cgcttcagagacaagcagcgtgtcccgcagcaccgcgccttcacctccagcccgcacgac
tacgacatgcgtgtggacgacttcctgcggcggacgcaggcagtggtgagcagccggcgg
gagcgcgagcggcagcgtgaacgggagcgaggcggacctcggcgtgaccgggagagagag
agggcgagggacagagaccgagagagagagagggacaaggagagggggcgctaccgcagg
tga
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