Amphiprion ocellaris (clown anemonefish): 111564440
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Entry
111564440 CDS
T06018
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1 isoform X1
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04010
MAPK signaling pathway
aoce04020
Calcium signaling pathway
aoce04260
Cardiac muscle contraction
aoce04261
Adrenergic signaling in cardiomyocytes
aoce04270
Vascular smooth muscle contraction
aoce04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
111564440
04020 Calcium signaling pathway
111564440
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
111564440
09153 Circulatory system
04260 Cardiac muscle contraction
111564440
04261 Adrenergic signaling in cardiomyocytes
111564440
04270 Vascular smooth muscle contraction
111564440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111564440
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
111564440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
111564440
NCBI-ProteinID:
XP_023119768
Ensembl:
ENSAOCG00000003524
UniProt:
A0AAQ5XUD4
LinkDB
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Position
5:complement(106602..192765)
Genome browser
AA seq
1661 aa
AA seq
DB search
MADSSSPPLSSYIMDEETLKRKQKEKLKKLMATGGNPRPARSLLFLTLRNPFRKACISIV
EWKPFEIIILLAIFANCVALAVYLPMPEEDSNNTNSNLESLEYIFLIIFSIECFLKIVAY
GFLFHADAYLRNCWNILDFVCVSVGLFTVVVDAINHISGVEAPVGEKGGGFDMKALRAFR
VLRPLRLVSGVPSLQVVMNSILKSMLPLFHITLLVFFMVTIYSIMALELFKCKMHKTCYY
TGTDIIATVENEKPAPCAQAGNGRRCAINGTECRAGWPGPNHGITHFDNLGFSMLTVYQC
ITTQGWTDVLYWVNDAIGMEWPWIFFTSLILVGSFFVLNLVLGVLSGEFTKEREKAKSRG
EFQKLRETQQLDEDLKGYMEWITQAEVIDNDQERQGLLPMENGGSENGNVTKMDTMQLII
YYYKLARKWNRLLRRKCRVYVKSKLFYWWVIMLVFFNTLAIATEHHKQSQRLTNWQDNTN
KLLLSMFALEMFMKMYALGIPSYFMSLFNRFDCFVVSTGIMELILVHMGVMSVMGISVLR
CIRLLRLLKVTRYWTSLSNLVASLLNSVRSIACLLLLLFLFIVIFSLLGMQVFGGKFNFP
NQPKPRSTFDSFPQALITVFQILTGEDWNAVMYDGIMAHGGPSMPGILVSIYFIILFVCG
NFILLNVFLAIAVDNLAEAESLTLAQKEKAEEKKRKKALRANMPDKASEEKSNLAKKLAE
QRAKGVEGIPTTAKLKIDEFESNVNEIKDPFPPADFPGDDEEEDPEMPESPRPRPMADLQ
LKEEAVPMPEASSFFIFGPQNKFRKLCHRIINATTFTNIILLFILLSSISLAAEDPIDPV
SFRNQVLAYADIVFTSVFTAEIVLKMTTYGAILHKGSFCRNSFNILDLLVVSVSLLSMGM
ESSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAVKTIGNIVLVTMLLDFMFACI
GVQLFKGKFYACTDPDKMTEETCKGWYIKYQEGALHEMEVREREWTNSELNFDNILNGML
ALFTISTFEGWPKLLYKAIDSNLEDTGPVYNNRVAISVFFIIYLILIAFFMMNIFVGFVI
VTFQEQGEQEYKNCELDKNQRQCVQYALKARPLRCYIPKNPYQYQVWYIVTSCYFEYLMF
LLIMLNTMCLGMQHCNQSDHVTHLSDMLNVIFTVLFTVEMILKLMAFKAKGYFGDPWNIF
DFVIVIGSVVDVILSEIDAALASSGGLYCLHGCAPVDPMQAIASSENMSVSITFFRLFRV
MRLVKLLNRSEGIRNLLWTFIKSLQALPYVALLILMLFFIYAVVGMQIFGKIALVDGTYI
NRNNNFQTFPQAVLLLFRCATGEAWHEVMLASMYGKKCDPKSDYLSGEEYTCGSNFAIIY
FMSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPQHLDEFKKIWAEYDPEATGRIKHL
DVVTLLRRIPPPLGFGKFCPHRIACKRLVSMNMPLNSDGTVTFNATLFALVRTALKIKTE
GNFEQANEDLRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLIQDYFRKLKKRQ
EEYYGYHPTKKSASHEIQAGLRNIEEEAAPELHRTISGDLITEEEMDRGVEGILRRQGSL
FENHSDPFAEVGDISGQATSQRPLQMAEGIINSGNTSHSQY
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atggctgacagcagcagccccccgttatcatcctacatcatggatgaggaaactctgaag
agaaaacagaaggagaagttaaagaagctgatggccacaggaggaaacccaaggcctgca
cgctctcttctcttcttgactctacggaatcccttccgcaaggcatgcatcagtattgtg
gaatggaaaccttttgaaatcatcatcctgctggccatctttgccaactgtgtggccctg
gctgtgtacttgccaatgcctgaggaagacagcaacaataccaacagcaacttggaaagc
ctggagtacatcttcctcatcattttctctatcgagtgcttcctgaagattgtcgcctat
gggtttctttttcatgctgatgcatatctgagaaactgctggaacattttggactttgtt
tgtgtatctgtagggctgttcactgtggtagtggatgccattaaccacatcagtggagtg
gaggctccagtaggagaaaaaggaggtggctttgacatgaaagctctgcgggcattcaga
gtcctcagaccactcagactggtctctggagtccccagcctgcaggtggtgatgaactcc
atcctgaagtccatgctgcctctgttccacatcaccttactggtcttcttcatggtcaca
atatactccatcatggcactggaactcttcaagtgcaaaatgcacaaaacctgctactac
acaggcacagacatcattgctacagtggaaaatgagaagccagctccatgtgcccaagca
gggaatggccgtcgctgtgccatcaacggcaccgagtgtcgagctggatggcccggaccg
aaccatggaattacacactttgacaacctgggcttttccatgctgactgtctatcagtgt
atcaccactcaggggtggaccgacgtcctctactgggtgaatgatgccatagggatggaa
tggccgtggatatttttcacctcactcatcctggtgggctccttcttcgtgctaaacttg
gttctgggtgtgctgagtggtgagttcacaaaagagcgagagaaagccaagtcccgtgga
gaatttcagaagctacgggaaacccagcaactggatgaagacctgaagggctacatggag
tggatcactcaggctgaagtcatagataatgaccaggagagacagggcctgctaccgatg
gaaaatggaggatcagaaaacggaaatgtcaccaaaatggacacgatgcagttgatcatc
tattactataagctggctcgtaagtggaaccgtttgttacggcgtaaatgcagagtgtat
gtgaagtccaaactgttctactggtgggtgatcatgctggtcttcttcaacacactggcc
attgcaacggaacatcacaaacagtcgcagagactcacaaactggcaagacaataccaat
aagctgctgctgtccatgtttgccctggagatgttcatgaagatgtatgctctaggaata
ccctcctacttcatgtctcttttcaaccgctttgactgctttgtggtgtccactggtatt
atggagctcatcctggttcatatgggtgtcatgtctgtcatgggcatctctgtgctgcgc
tgcatacgactgctccgcctgctcaaagtcaccagatactggacgtctctcagtaacctg
gtggcttccctcttgaactcagtccgctctattgcctgcctgctgctgctccttttcctt
ttcattgtcatcttctccctgctgggtatgcaggtgtttggtgggaagttcaactttccc
aaccaacccaaaccacgcagcacctttgacagcttccctcaggctctcatcacggtgttc
cagatactgacgggtgaggattggaatgctgtcatgtatgacggcatcatggctcacgga
ggacccagcatgcctgggatcctcgtcagcatctacttcatcattctctttgtttgtgga
aatttcatcctcctaaacgtcttcctggccatcgctgttgataatttggcagaagccgag
tctttgactttggcacagaaagagaaagcagaagaaaaaaagcgcaagaaagcactcagg
gctaacatgcctgacaaggcctcagaggagaaatctaatctggctaaaaagttggctgag
caaagggctaagggtgtagagggcatccctactactgccaagctcaaaattgatgagttt
gagtctaatgtgaatgagatcaaagatcccttccctcctgcagactttcctggtgatgat
gaggaggaggaccctgaaatgccagagagccccagaccccgtccaatggcagacctgcag
ctgaaggaggaggccgtgccgatgccagaggccagctcatttttcatctttggacctcag
aacaagtttcggaagctctgccatcgtattatcaatgccactactttcaccaacatcatc
ctcctcttcatcctgctgtcgtctatttctttagctgctgaggatcccattgacccggtg
tctttcaggaaccaggtgctggcctacgctgatatagtcttcacctcagtgttcactgca
gaaattgtgctcaagatgacaacttacggtgccattcttcataaaggatctttctgccgg
aattctttcaacatcttggatcttctggttgtcagtgtgtctctcctgtcaatgggcatg
gagtcgagtgccatctccgtggtgaagattctcagggtgttgagggtcctccggcccctc
agggctatcaacagagccaaaggactcaagcatgtggttcagtgtgtgtttgttgccgtc
aagaccattggaaatatcgtactggtcacgatgctgctggactttatgtttgcctgcatt
ggagtccaacttttcaaaggaaaattctatgcctgcacagatccagacaaaatgactgag
gaaacatgcaaaggctggtatataaagtaccaggaaggagctcttcatgaaatggaagtc
cgtgagagagaatggaccaactctgaactaaactttgacaacattctcaatggcatgctg
gctctcttcaccatttctacctttgaaggatggccaaagctgttatataaagccattgat
tcaaacttagaggatacaggcccggtgtacaacaatagagtggccatctcagtcttcttc
atcatctacctcatcctcatcgccttcttcatgatgaatatctttgtgggcttcgttatc
gtcacctttcaggagcaaggagagcaggaatacaagaactgtgagctggacaagaatcag
cgccagtgtgtgcagtacgctctcaaggctcgacctcttcgctgttacattcccaaaaac
ccctaccagtaccaggtgtggtacatcgtcacctcctgctacttcgagtacctcatgttc
ctccttatcatgctcaacaccatgtgtctaggaatgcagcactgtaaccagtcagaccac
gtcacccacctctctgacatgctgaatgtgatcttcactgtgctcttcactgtggagatg
atccttaaactcatggccttcaaggctaagggttactttggagacccctggaacatcttt
gatttcgtcatcgtcattggaagtgttgtggacgtcatcctcagtgaaattgatgcagct
ctggcgtcctccggaggactttactgtctccatggttgtgctccagtggatcccatgcaa
gccattgcgtcttctgagaacatgagtgtgtcaatcacattcttcagactgtttcgtgtc
atgcgtctggtgaagcttttgaatcgatctgagggcatacgaaatcttctgtggaccttc
atcaaatcccttcaggctcttccttatgttgcgctgctcattctaatgctgttctttata
tatgctgtggttggaatgcagatatttggtaaaattgcgttggttgatggcacatacata
aacagaaacaacaacttccagacattcccacaggctgtgttgctgttattcagatgtgct
acaggggaggcgtggcatgaagtgatgttagcgtctatgtacgggaagaagtgtgaccct
aagtcggactacctgtctggggaagagtacacctgtggatccaactttgccatcatctac
ttcatgagtttctacatgctctgtgcttttctgatcatcaacctgtttgtggctgtcatc
atggataattttgactacttgacacgtgattggtctattcttggccctcagcacttggat
gagtttaagaaaatctgggcagaatatgatcctgaagccacggggcgtattaagcatctt
gatgttgtgacactcctacggagaatacctcctcctttaggttttggcaagttctgtccc
catcgcattgcctgcaagaggttggtctccatgaacatgcctcttaacagtgatggaaca
gtcaccttcaatgccacgctgtttgccctggtcagaactgcactgaaaataaagacagaa
ggtaattttgaacaagccaatgaggatttaagggcgattatcaagaagatctggaagcgt
accagtatgaaactcctggatcaagtcatcccacctataggagatgatgaggtgacagtg
ggaaagttctatgccactttcctaatccaagattatttcagaaaattgaagaagagacag
gaagagtactatggctatcatccaacgaagaaaagtgcctcccatgagatacaggcagga
ctgaggaacattgaggaagaggcagctccagagctccacaggaccatttctggagaccta
atcactgaggaagagatggaccgaggagtggagggcatcttaaggaggcaaggtagtctt
tttgagaaccactcagatccttttgctgaagtgggtgatatttccggtcaggccactagc
cagcgccctctgcagatggcagaaggaatcattaacagtggcaacacaagtcacagccaa
tattaa
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integrated database retrieval system
