Amphiprion ocellaris (clown anemonefish): 111564442
Help
Entry
111564442 CDS
T06018
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a isoform X1
KO
K06757
neurofascin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111564442 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111564442 (nfasca)
Cell adhesion molecules [BR:
aoce04515
]
Immunoglobulin superfamily
L1 family
111564442 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF3792
MnhB
Motif
Other DBs
NCBI-GeneID:
111564442
NCBI-ProteinID:
XP_054866776
Ensembl:
ENSAOCG00000003126
LinkDB
All DBs
Position
5:complement(398009..550402)
Genome browser
AA seq
1389 aa
AA seq
DB search
MLGQGGHAALALMSLLLLLWQEAAPIEVPQDAKILQDLKQPPTIIKQSVKDYIVDPRDNI
IIECEAKGNPVLTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ANNDLGVALSNKILLRVSKAPLWPKEVLEPVSVTEGSPLVLPCNPPPGLPPPFTFWMDSS
MSPIPQDKRVSMGLNGDLYFSNVLAQDAHTDYSCNARFLFTHTIQQKNPFTLKVQTTEPF
NDTSYNATDPYGGRKVAESTPIFLSPPGTESSKMVLRDEQLLLECIAAGLPTPTIKWFKK
GGDLPGRKVKFENYNKTLKIINVSEEDAGEYVCMANNHLGSIRHSIFVQIKAAPYWLDKP
SDLVLAPDENGRLVCRANGNPKPNIQWLINGHPIESYPSSPNRQELGDTIIFRSVQIGSS
AVYQCNASNQHGYLLANAFVSVLDMPPRMLGPKNQLIKVIENNRTFLDCPFFGSPLPDLR
WFKNGQGSGLDGGQYRVYINGTLEIKRARAEDEGTYTCVANSILGTAENQVRLEVKEPTR
IVRLPEHQSAIRGSTARFDCKVKSDPSLTVTVAWMKDDKPLHLGWRLRKDEESLTIPNVN
EGDEGTYTCAVKSEIDQDSASARLTVLEEASLNPSVSSALPPDRPDPPMDLDLSDPAARS
VRLTWIPGNDHRSPITEFLVQFEEDRWEPNRWQNLSTYPGDLNSVILQLAPFVNYQFRVI
AINSVGQSQPSRPSPRYKTSGAAPDAIPRGLRGWGSKKDNMEITWEPLLDLERNGPNLHY
SIWWRRKDSGEEWSNVTTVGSKHVVHNTETYVPYEIKLQARNEFGSGPESNVIIGYSGED
KPTDAPTDLQVSKVDSTKANVHWKPVDPNTVQGEFKEYRLYYWRESSQVPGLIVSKEKKT
KGFYSTTAEPSGILSDLVPYSKYKMFMVVANNHFEGPPSNTVEFNTKEGVPDAPRSFRIY
RRSLDTIYLEWEKPLEPNGILIGYQLRYQTVNGSRLGRSHLETFLPNVTDFTLRLSDRST
RYKFFLSALTQVGTGEVYAEESPHFTNEENFTDATVELTDASVSSAFTPTPLASVPPTTV
APTTISTSTTTASTTTTSTTTTTTTTTTTTEASTTITLPVLVTTKRNDQTVLVAPGIWDL
TVKANSDYANVSWNHNFPAGSSEFVLEFTLDSDKTVKIVPVKQQPPITVADLIAGAEYHL
RVYSHELNSVSSKSVSFKTKPAYIDHVDIATQGWFIGLMCAIALIILILLIVCFIKRSRG
GKYPGGGFVTGLAMCLVRDKKDLPLDPVDQKDQDGSFDYQNGSSVPDRNENENSSDEDNK
PLQGSQTSLDGNVKESDDSLVDYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATS
PVNAIYSLA
NT seq
4170 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcgggcatgcagccctggctctgatgtcgttactgctgctgctgtgg
caggaagcagcacccatcgaagtcccacaagatgcaaagatcctgcaagacctaaagcag
ccccccacaataatcaaacagtcagtgaaagattacattgtggaccccagagataacatc
atcatcgagtgtgaggccaaaggcaacccagtgctaacgttttcatggcgaaggaatggg
aaattcttcaacattgggaaagatcccagggtgacgatgcggaaacgttcaggaactctg
gagatcggcttccgcagcggaggacggccagaggactacgaaggagaataccagtgcttt
gccaacaatgacctgggagtggcgttgtctaacaaaatcctgctccgggtctctaaggct
cctctgtggcctaaggaggtgctggagccggtgtcggtgactgaaggctccccgctggtc
ctaccctgtaaccccccaccaggcctgcctcctccgttcaccttctggatggacagcagt
atgagtcccatccctcaggataagagagtgtccatggggctgaatggagacctttacttc
tccaatgttttagcccaagacgctcacacagactacagctgcaatgctcgcttcctcttc
acacacaccatccagcagaagaaccccttcacactcaaagttcagaccacggagccgttt
aatgacacatcttacaatgccactgacccctacggtggccgtaaagtagcagagtccacg
ccgatcttcctctcaccgccagggactgaaagttctaaaatggtgctacgagatgagcag
ctgttgctggagtgtattgctgctggactcccaacacccacaatcaaatggtttaagaag
ggcggggacctgccaggaaggaaggtgaagtttgagaactacaacaaaaccctgaagatt
atcaacgtgtcagaggaggatgcaggggagtatgtatgcatggctaacaatcatttaggc
agcatacgccactccatcttcgttcagatcaaagcggctccttactggctggacaaaccg
tcagacctggtgctagccccggatgagaatggacgtctggtgtgtcgtgcaaatggcaac
cctaaacccaacatccagtggcttatcaatggacaccctatagaaagctatccctccagc
ccaaacagacaggagctcggtgacaccatcatctttcgctcagtgcagattgggagcagt
gctgtttaccagtgcaacgcctccaaccagcacggctacctgctggccaatgccttcgtc
agcgttctcgacatgcctccgaggatgctgggccccaaaaaccagttgattaaagtcatc
gagaacaaccggaccttcctagactgcccattctttggttcccctttaccagacctgcgc
tggtttaagaacggacagggcagtggactggatggtggtcagtaccgtgtctatatcaac
ggcacactggagataaaacgtgcccgagcagaggacgagggcacctacacttgtgtggcc
aacagcatcttgggcacagctgaaaaccaggtccgcctggaggtcaaagagccgactcgt
atagttcgactccccgagcaccaatccgctatcaggggctctacagctcgctttgactgt
aaggtgaagtctgatcccagcctgactgtcactgtggcctggatgaaggacgataagcct
ctgcatctgggatggaggctgaggaaggatgaagagtcgttgaccatccccaatgtcaat
gagggcgatgagggaacgtacacatgcgctgttaaatctgagatagaccaggactcagcc
tcagcccgcctcactgtgttagaggaagcctccctcaacccctcagtctctagtgccttg
cctccagaccgtccagaccccccgatggatctggatctgtcggacccagcagcccgcagc
gtccgccttacctggatccctggaaacgaccacaggagccccatcacagagttcctagtc
cagtttgaggaggaccgctgggagccaaataggtggcagaacctgtccacttaccctgga
gacctcaactccgtcatcctgcagctcgccccgttcgtcaactaccaattcagagtcatc
gccatcaactcagtaggtcagagtcagccgagccggccctcacctcgctacaaaaccagt
ggagctgccccagatgctattcccagaggtctacgaggatgggggtccaaaaaggacaac
atggagattacctgggagcccctccttgatctggagagaaacggtccaaacctgcactac
agcatttggtggagacgaaaggattcgggggaggagtggagtaatgtgaccacagtgggg
tccaaacatgttgtccacaacacggaaacctacgtgccttatgagatcaaacttcaggcc
aggaatgagtttggatcgggaccagaatctaatgtgatcattggatactcaggagaggac
aagcccactgatgctcccactgacctgcaagtgtcgaaggttgacagcaccaaagccaac
gtccactggaagcctgtggatccaaacactgtccagggagagttcaaggagtacagattg
tactactggcgtgagtccagtcaggttccaggtttgattgtcagtaaggagaagaagacc
aaaggtttctacagcaccacggctgaaccgtctggcatcctcagtgacctggtgccctac
tccaaatacaagatgttcatggtggtggccaacaatcactttgagggtccacccagcaac
acagtggagttcaacaccaaggagggagttccagatgctccaaggtccttcaggatttac
cgcaggagtttggacaccatctacctggaatgggaaaaacctctggagcccaacggcatt
ctgattggataccagctcaggtaccaaacagtcaacggttccaggttgggtcgctcccat
ctggagacgttccttcctaatgtgacagattttacccttcgcctgtcggaccgatccacc
cgctacaagttcttcctgtcagcactgacccaggtgggaacaggggaggtctatgctgag
gaatcgccacacttcaccaatgaggaaaactttactgacgccacagtcgagcttaccgat
gcctccgtgtcttctgctttcactcctactcctctcgcttctgttcctcctactaccgtc
gctcctacaaccattagtacctcaacaactaccgcttcgacaactaccacttctactact
actactactactactactaccactactacggaggcgagcactaccatcacactccctgtg
ctggtcaccaccaagcgaaacgatcagaccgtgttggtggcccctgggatctgggatctg
acggtgaaggctaacagtgactacgctaacgtcagctggaatcacaacttcccggccggc
agcagcgagtttgtgctagagttcacactggacagcgacaagacggtgaaaattgtaccg
gtgaaacaacagccccccattactgtggcggatctgatcgctggtgccgagtaccacctg
agggtttactcccatgagctcaacagcgtcagcagcaaatctgtcagctttaagaccaaa
ccagcctacatagaccatgtagacatcgccactcagggctggttcattggcttgatgtgt
gccatcgccctcatcatcctgatcttactcatcgtgtgcttcatcaagaggagtcgtgga
ggcaaatacccaggtggtggtttcgtgactggtttggccatgtgtctggtgcgtgataaa
aaagatctccccttggacccagtggaccagaaagaccaggatggatcctttgattaccaa
aatgggtcatctgtccctgacaggaatgaaaacgagaacagcagcgatgaggacaacaag
cctctgcagggcagccagacttcactggacggcaacgtaaaggaaagcgatgacagcctg
gtagactatggcgaaggcggcgacggccagtttaatgaggatggctcttttattggccag
tacacagtgaagaaggacaaggacgagacggagggcaacgagagctccgaggccacctcg
cccgtcaacgccatctactcactggcatag
DBGET
integrated database retrieval system
