Amphiprion ocellaris (clown anemonefish): 111564512
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Entry
111564512 CDS
T06018
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111564512 (mex3b)
04121 Ubiquitin system [BR:
aoce04121
]
111564512 (mex3b)
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111564512 (mex3b)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111564512 (mex3b)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111564512 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
RING_XB3-XBAT31
KH_2
KH_DEAH11_2nd
Prok-RING_4
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
111564512
NCBI-ProteinID:
XP_023119904
Ensembl:
ENSAOCG00000023903
LinkDB
All DBs
Position
1:complement(33135301..33140712)
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AA seq
542 aa
AA seq
DB search
MPSSLFADSSVQGDALDDQRALQIALDQLSLLGLDNDENPLYDNNQEPRKKSVNMTECVP
VPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIISAA
EHFSMIRASRNKNTSLNGSGTPVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQQ
QTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIELQDENDFHANGTDV
GFDLHGHATLWSKPSAGMTPTSVRKPFSNYRNDSSSSLGSASTDSYFGNNSSRMADYSPP
SPALSYTTTNNNGNNNNNNINVNTNGNGFVYGSEVISPECTDMTFDSSSGFDPTPAPPGL
LWSPYDSRMTPSSTGGSSPTSTSAIFPTNTCTNANGIVANQRRVNGCTPQPRMSPPLHSH
NRGSMEHPLARRVRSDPGGGPLSFPGYSGSITSLPGPHLPGVPCDSSASSTSSSSSSSTS
SGTSRKGSRDCSVCFESEVIAALVPCGHNLFCMECANRICERSEPKCPVCHTGVTQAIRI
FS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcgctgttcgctgacagcagcgtccagggagacgcactggacgaccagcga
gccctgcagatcgccctggaccagctgtctctgctcggcttggacaacgacgagaacccg
ctgtacgacaacaaccaggagccccggaaaaagagcgtcaacatgaccgaatgcgtcccg
gtccccagctccgagcatgtggctgagattgtgggcagacaaggttgcaagatcaaagca
ttgcgagcaaagaccaacacctacatcaagactccagttcgaggtgaggagcctgttttt
gtggtaacaggcaggagggaggatgtagctatggccaggagggagatcatttctgctgcg
gagcacttctccatgatccgagcctcccggaacaaaaacaccagcctgaatgggagtggc
accccggttcctggaccacctaacctgcctggacagaccaccatccaagttcgggtgcct
taccgtgttgtggggctggttgtaggccccaagggtgccaccataaagcgcatccagcag
cagacccacacctacattgtgacaccaagccgagacaaggagccagtgttcgaggtgaca
gggatgccagagaatgtggaccgagcacgtgaagagatcgaagcccacattgccatgagg
acaggaggtcttattgagctccaggatgaaaatgactttcacgcaaatgggactgatgta
ggttttgatctgcatgggcatgccaccctgtggtccaagcccagtgcgggaatgacaccc
acctcagtgcgcaaacctttctccaactaccgcaacgactcgtcgtcctccttgggtagt
gcatcgacagactcttactttggtaacaacagctcacgcatggccgactacagccccccc
agccccgcactcagttataccaccaccaacaacaatggcaacaacaataacaataatatc
aatgtcaacaccaatggcaacgggtttgtttacggaagtgaggtcatctcacctgaatgc
actgatatgacttttgactcttcatcagggtttgaccctacaccagccccaccaggcctc
ctttggtcaccatatgatagtcgcatgaccccctcctccaccggaggcagttctcccacc
tccacctcagccatattcccaaccaacacatgcactaatgccaatgggatagttgcgaac
cagagaagagttaatggttgtaccccacaacctaggatgtcccctccacttcacagccat
aaccgagggtccatggagcacccgttagcccggagggtgcgcagtgacccaggtggaggc
cctctcagtttccctggttactcgggctctatcacatccttgccaggtcctcacctccct
ggggttccctgcgactcgtcagcctcgtccacctcctcctcttcctcctcctccacctca
tctggcacgagccgaaaaggcagccgtgattgttcagtgtgctttgagagtgaggtcatt
gccgccctggtcccctgtgggcacaacctcttctgtatggagtgtgccaatcgtatctgt
gagaggagtgagcccaaatgtcctgtctgccacaccggcgtcactcaggctatacgtata
ttttcataa
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