Amphiprion ocellaris (clown anemonefish): 111564666
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Entry
111564666 CDS
T06018
Symbol
taf1a
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit A
KO
K15212
TATA box-binding protein-associated factor RNA polymerase I subunit A
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111564666 (taf1a)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
111564666 (taf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF1_subA
COG4_N
Motif
Other DBs
NCBI-GeneID:
111564666
NCBI-ProteinID:
XP_023120152
Ensembl:
ENSAOCG00000002292
LinkDB
All DBs
Position
12:complement(16153453..16163882)
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AA seq
426 aa
AA seq
DB search
MDDLDRELGPYEPVEDFSDFSVDNSSKGGTNVKHPNVNPTMCLETPRETGFHRSTRICLE
QIREAILHHRWQEAAEYMACYPQLLEDTCLPLAQQNKELLWRISINILHHHPNSTMEDYN
NICERMKHSGIRHHLMICLEHSFHLLLHGQAEDAKWQLSSAESWRHGKESAAQHQRAKLI
QAYRSLLDYVIWCDKRFSNSNNYFDSDNQGMHNNFRQASLNLKEILKSPGVWDSFILSYI
DMLELYDDHEEALKILNDYAYNNNFPPNPNAHAYLYRYLKRHDASEKNLMRVLKVLHILV
PSHELMLDYSTLLLNSENEADIQKALGIILDMLDFTCWRTNMDVWKCLKAVIQRLEIQED
WENFVCEKMALRKDWWPALHFTSFHASKDLEENPELWKVKASLEKVLCPKQTLKYTADCV
TNGKRT
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttggatagagagcttgggccttatgaacctgtagaagatttcagtgatttc
tcagttgacaactcttcaaaaggagggacaaatgtaaagcaccccaatgttaatcccacc
atgtgtctagagacaccacgtgaaactgggtttcaccggagtaccagaatctgtctggag
cagatcagagaagcgatactgcatcatagatggcaggaggcagcagaatatatggcatgc
tacccccaattactagaggacacatgtcttcctctagcacagcaaaataaagagcttctt
tggagaatctccattaatatccttcatcatcatcccaactcaacaatggaagattacaac
aacatctgtgaacgaatgaaacattctggcatcagacatcatttaatgatttgtctggaa
cattctttccacctgctgctacatggtcaggctgaagatgcgaagtggcaactgtcttca
gctgagagctggagacatgggaaggagtcagcagctcagcatcagagggcaaaactgatc
caggcatacaggagcttgctggattatgtcatctggtgtgacaaaaggttttcaaactcc
aataattattttgactctgacaaccaaggcatgcataacaacttcagacaggcttctctc
aatctaaaggagattttgaaaagtcctggtgtctgggattccttcatactgagttacatt
gatatgctggagctctatgatgaccacgaggaggctcttaaaattctgaatgactacgca
tataacaacaattttccacccaatcccaatgcacatgcctatctgtaccggtacttaaag
cggcatgatgcttcagagaagaacttgatgagagtgttgaaggttctgcatatattggtc
ccaagccatgagttgatgttggactacagtactcttctgcttaactcagagaacgaagca
gacatccagaaagctttaggtatcattctggacatgctggacttcacctgctggaggacc
aatatggacgtttggaagtgtttaaaggctgttattcagagactggaaatacaagaagac
tgggagaattttgtctgtgaaaagatggctctaagaaaagactggtggcctgcgctgcac
ttcacaagcttccatgccagcaaagatcttgaggagaaccctgagctttggaaagtgaaa
gcgtcacttgaaaaagttctttgtccaaaacaaacactgaagtacactgctgattgcgta
actaatggaaaaaggacttga
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