Amphiprion ocellaris (clown anemonefish): 111564855
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Entry
111564855 CDS
T06018
Symbol
itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04510
Focal adhesion
aoce04512
ECM-receptor interaction
aoce04810
Regulation of actin cytoskeleton
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111564855 (itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111564855 (itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
111564855 (itga1)
04810 Regulation of actin cytoskeleton
111564855 (itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aoce04147
]
111564855 (itga1)
04515 Cell adhesion molecules [BR:
aoce04515
]
111564855 (itga1)
04090 CD molecules [BR:
aoce04090
]
111564855 (itga1)
Exosome [BR:
aoce04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111564855 (itga1)
Cell adhesion molecules [BR:
aoce04515
]
Integrins
Integrin alpha subunits
111564855 (itga1)
CD molecules [BR:
aoce04090
]
Proteins
111564855 (itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
Integrin_A_Ig_1
FG-GAP_3
VWA_2
Motif
Other DBs
NCBI-GeneID:
111564855
NCBI-ProteinID:
XP_023120458
Ensembl:
ENSAOCG00000011579
LinkDB
All DBs
Position
17:13183964..13250620
Genome browser
AA seq
1187 aa
AA seq
DB search
MLWLSRHFTLTAAAVVVLLACVLSFNVDQKNGLSFSGPLEDMFGYTIQQFENSEGKWVLI
GSPLSGQPAKRTGDVYKCPVGTGDNKCVKLELPKNTTVPNLREVKENMTMGSTLVTNPNG
GFLACGPQYGYMCGQQQFISGVCANVSSSFQILNSVAPAVQECAKELDIVIVLDGSNSIY
PWSSITDFLSRFLEKIEIGPKLSQVGIVSYGETVTHRVNLSQFDNTPALLDFVKDLPQQT
GFKTMTFLGIDTARKEAFMPERGARPGVKKVMVIVTDGESHDFHNLDKVIGDCEEDDIER
FGIAVLGDYNRQNKSAEEVHKFIKEIESISSQPLRDHFFNVSDEFALLNIVDALGSRIFA
LEATTGNFTSSFEMEMSQTGFSAHTSKDGVLLGAVGAYDWNGTVVMQAAGETIVPGKKQF
YDPEIEAGYEGLAGYLGYDVQSASTPDGVLYITGAPRYNHTGRVVIYRLSETNNVVVSQI
LKGDQIGSYFGSVLQTLDVDGDSYTDLLLVGAPMYMGSERNEQGQVYVYKLNKAGKFEHQ
FTLKPIHQSCCTAHSDSCTNKNEPCGARFGTAIAAVSDMNLDGFNDVAIGAPFENDHRGA
VYIYHGDKTTLKEKYVQRIPAGGDGEKVKFFGQSIHGVMDLNGDGITDITIGGLGGASLF
WSRDVAELHANMTFNPAKINLQQSQHQCEHGGRKSVCVTTEVCFFYSIKSDQQDLDSFAE
ISYSLTLDALRAKARASFIAMDDKSDRRITKAFLIRDRERRCVNQTFMMSARLDFRDPLL
VSLEFGLADEDQGPVLDENLPKSINKTIPLVDCGGDEKCIADLSLKAEPNVKSMVIKVND
KAKIDVNINVRNSKDNAYNTKVILSFSPNINYVKVEPEKDCTLNHTKVECAVGYPFLGSN
AEENFKVKFEVNPNHVQEEIQINVTATSDSEELPSTQGDNSVQISIPVKYEAGLTFKVVH
ADEHIVVKDGEQYAAEINDTRMIGEEVNISYTVEKSGGSVSLPLDLTVAYPRLSPLKNRL
LYLTHVAKSPQVKCNAEHWINPDKINPNAIKLEPKKETLSAFLLRCENIDCVSFSCSIPE
AKISQVNVTFRVWKPTFIKGEFSSLHMTVNATLMLRNTKLFELGSNGKTRSVKIQVSKET
IGGIPFWIIILSILIGLLILALVIFILWRLGFFKRKSRDYSKEEMAN
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgctctggttgagtcgacatttcactctaacagcagcggcagttgttgtgctgctggcc
tgtgtgttgtccttcaacgtggaccagaagaatggtttgtccttcagcggcccactggag
gacatgtttggctacaccatccagcagtttgagaacagtgaggggaaatgggttctgatt
ggatcaccgctgtcgggtcagccagccaaacgaaccggagacgtctacaaatgtccagta
ggaacgggggacaacaaatgtgtcaaactggagctgcccaagaacacaaccgttcccaac
ttgcgtgaagtcaaggagaacatgaccatggggagcacactggtgaccaatcccaacgga
gggtttctggcgtgtggtcctcagtacggctacatgtgcggccagcagcagttcatctcg
ggagtttgtgcaaatgtcagctcctccttccagatcctcaactctgtggcaccggctgtg
caagagtgtgcgaaggagctggacattgtgatcgttctggacggatccaacagcatctac
ccctggtccagcatcaccgattttctgagccgcttccttgagaagattgagatcggacct
aaactctcacaagtgggcattgtgtcctatggagagactgttactcaccgtgtcaacctg
agccagtttgacaacactcctgctctgctggattttgtcaaagaccttcctcagcagacc
ggcttcaagaccatgactttcctgggcatcgatactgccaggaaggaggccttcatgcca
gaacgcggtgcacgacctggagtgaagaaggtcatggtgattgtgacggacggagagtca
catgatttccataatctagacaaggtcattggagactgtgaggaagatgacattgagagg
tttggcatcgctgttttgggagactacaatcgtcagaacaaaagtgcagaagaagtgcat
aagtttatcaaagagattgagtcaatctccagtcagccgttacgagatcacttcttcaac
gtgtccgacgagtttgctttgttgaacattgtagatgctttgggaagcaggatttttgcc
ttggaagctacaactggcaacttcacctcctcctttgagatggagatgtctcaaactggg
tttagtgcacacacttcgaaagacggtgtgttactgggagcagtgggagcgtatgactgg
aacggtacagtagtcatgcaggctgctggagaaactattgttccagggaaaaagcagttc
tacgacccagagattgaggctgggtacgaagggctggccgggtacctcggctatgatgtt
cagtcagcatccaccccagatggagtgctgtacatcacaggtgcaccacgatacaaccac
acaggtcgagtcgttatctaccgtctgagtgaaaccaacaacgttgtcgtgtcacagata
ctgaaaggagatcagattggttcttacttcggcagcgtcctgcagactctcgacgttgat
ggggattcctacacggacctcctgttggtcggtgctccaatgtacatgggctcagagaga
aacgagcagggacaagtctacgtctacaagctcaacaaggccggcaagttcgagcaccag
tttactttgaagccaatccatcagtcatgttgtactgctcactcagacagctgcactaat
aaaaatgaaccgtgtggtgcccggtttggtacggccattgcagcagtgtcagacatgaac
cttgatgggtttaatgatgtggcgatcggagcaccttttgagaatgatcacagaggagcc
gtctacatctatcacggagacaagacgacactgaaagagaaatatgtgcagcgtatccct
gcaggtggtgatggtgaaaaggtgaagttcttcggtcagtccattcacggagtcatggat
ctaaatggagatggaatcactgatattaccataggaggtctgggaggagcttctctattc
tggtccagagatgttgcagaactgcatgccaacatgactttcaacccggctaaaatcaac
ctgcagcaatctcagcaccagtgtgaacacggtggacgcaaatctgtgtgcgtgacgacc
gaagtgtgtttcttctacagcatcaaatctgaccagcaggacttagactcttttgcagaa
atcagctatagtctgactctggatgctctgcgtgcaaaagccagagcttcatttattgcc
atggacgataaaagcgatcgtcggattaccaaggcattcctcatcagagacagagagaga
agatgcgtgaatcaaaccttcatgatgtcggcccgcctggacttccgagaccctctcttg
gtgtcgttggagtttggactagctgatgaggaccaaggccccgtcctggatgaaaacctt
cccaaatccatcaacaagacaattcctttagtggactgtggaggtgatgaaaaatgcatt
gcggatctctccctcaaagcagagcctaatgtgaaaagcatggtgatcaaagtaaacgac
aaagccaagattgatgtgaacatcaacgtcagaaacagcaaagacaacgcatacaacacc
aaagttatcctcagtttctcaccaaacatcaactatgttaaagtcgagccagagaaagac
tgcactctgaaccacaccaaggtggagtgtgctgtcggataccccttcctgggaagcaat
gcggaggaaaacttcaaagtgaaatttgaggtcaatcctaatcatgttcaggaggaaatt
cagatcaatgtgacagctacaagtgacagtgaggagctgccttctactcagggtgacaac
agcgtgcagatctccatccctgtgaagtatgaagctggactcacattcaaagtggtgcat
gccgatgaacatattgtagtaaaagacggcgaacaatatgcagcggaaatcaatgacacc
aggatgattggagaagaggtcaacatcagctatacggtggaaaagtcaggtggcagtgtg
tctctacctcttgacctcacagtggcgtatcctcgtctgtctccactaaagaacaggtta
ctgtacctgacacatgtcgccaaaagcccacaggtgaaatgtaacgcagaacattggatc
aaccctgataaaattaacccgaacgctataaagctcgaaccaaagaaagaaacgctcagt
gccttcctattgcgctgcgaaaacatagattgtgtgtcatttagctgctccatccccgaa
gctaaaatcagccaagtcaacgtcacgtttagagtgtggaaacctacgttcatcaagggc
gagttttccagtttgcacatgacagtgaacgccactttgatgctcagaaacacaaagctg
tttgaactgggcagcaacggcaagaccagaagtgtcaagatccaggtttcgaaagagacc
ataggaggaatccctttctggatcatcatcctcagcatccttataggactgctgatctta
gcacttgtcatcttcattctttggaggttgggcttcttcaaaagaaaatccagggattac
tcaaaggaggaaatggcgaactga
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integrated database retrieval system
