Amphiprion ocellaris (clown anemonefish): 111564881
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Entry
111564881 CDS
T06018
Name
(RefSeq) collagen triple helix repeat-containing protein 1 isoform X3
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
aoce03037
]
111564881
Cilium and associated proteins [BR:
aoce03037
]
Other cilia and associated proteins
Stereociliary proteins
111564881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
111564881
NCBI-ProteinID:
XP_023120512
Ensembl:
ENSAOCG00000012016
LinkDB
All DBs
Position
9:30983285..30988573
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AA seq
230 aa
AA seq
DB search
MMSPFVARLLLLVCLALPLYGVEKVRNRGYRKDPDADKFGSCMQGPAGTPGRDGNPGANG
IPGTPGIPGRDGLKGEKGECISEIFEEPWKPNYKQCAWNSLNYGIDLGKVADCTFTKLRS
DSALRVLFSGSLRLKCKNACCQRWYFTFNGAECTGPLPIESIIYLDQGSPELNSTINIHR
TSSVEGLCEGVKAGLVDVAVWVGTCADYPRGDASTGWNSVSRIIIEELPK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctccttttgttgcccgcctgctgctgcttgtctgcttggctttacctctttat
ggcgtggaaaaggtgagaaatagaggataccgaaaggatcctgacgctgacaagtttggc
agctgcatgcagggcccagcaggaacccctggcagagacggtaaccctggagccaacggt
atcccagggacgccaggtatcccaggacgcgatgggcttaagggtgaaaaaggagagtgc
attagtgagattttcgaggagccctggaagcccaactacaagcagtgtgcctggaactct
ctgaattatggaatcgacctgggtaaagtagctgattgtacgttcaccaagctgcgttca
gacagcgccctcagagttctcttcagtggctccctcagactcaagtgtaagaacgcctgc
tgtcagaggtggtacttcaccttcaatggagcagagtgcacaggaccgctgcccatagag
tccatcatttacttagatcaagggagtcctgagctcaactcaaccatcaacatccacaga
acgtcctcagttgaaggcctgtgtgagggcgtcaaagcagggttggtggatgtggcggtg
tgggtggggacctgtgctgactaccccagaggagacgcttccacaggctggaattctgta
tccaggattatcattgaggaactgcctaaataa
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integrated database retrieval system
