Amphiprion ocellaris (clown anemonefish): 111565064
Help
Entry
111565064 CDS
T06018
Symbol
gpc6a
Name
(RefSeq) glypican-6a isoform X1
KO
K08112
glypican 6
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aoce00535
]
111565064 (gpc6a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
aoce00537
]
111565064 (gpc6a)
Proteoglycans [BR:
aoce00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
111565064 (gpc6a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
aoce00537
]
Others
111565064 (gpc6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
SpoIVA_C
Serglycin
Motif
Other DBs
NCBI-GeneID:
111565064
NCBI-ProteinID:
XP_054866715
Ensembl:
ENSAOCG00000021900
UniProt:
A0AAQ5XT08
LinkDB
All DBs
Position
1:complement(7525949..7704363)
Genome browser
AA seq
570 aa
AA seq
DB search
MYAMWRLQVALCTLSVLSLSSGGESKARSCSEVRQAYNAKGFSLVNVPHQEISGEHLRVC
PQGYTCCTSEMEDKLNQQSKLEFENLVEESSHNMRTTFVSRHKKFDEFFLELLDNSEKSL
NSMFTRTYGKLYMQNSEVFQDLFTELKRYYTGGNVNLEEMLNDFWSRLLERMFQLLNSQY
HFTDDYLECVSKYTDQLKPFGDVPRKLKAQVTRAFIAARTFVQGLMVGREVANRVAKVNI
VPACVRALTKMLYCPYCRGMPGLKPCHNYCHNVMRGCLANQADLDAEWNLFIDAMLLVAD
RLEGPFNIEAVIEPIDIKISEAIMTMQDNSMQVSAKVFQGCGQPKPSGIGRSARGISDVF
STRFRPYTPEERPTTAAGTSLDRLRVVWRTMQHSVTDIKEKLKESKRFWSNLPDDICAKG
KLTESDEEQCWNSHTKGRYFPEVVKEGLTNQVNNPEVDVDITRPDTLIRQQIMALRVMTN
KLKNAYNGNDIYFQDSSDEGSSSGSGSGCSDGCTTEFIFVGTEAPVIGADRSDERAAVAA
AGKSLSCGPSTLLVMTALTFLLWSMQTQWR
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgatgtggagactgcaagtcgccttatgtactctgtcggtgctgtccctgtca
tctggtggtgaaagcaaagctcggagctgtagcgaggttagacaagcttataacgcgaaa
ggattcagcctcgtcaatgtacctcatcaggaaatatcaggtgagcacctgcgtgtctgt
cctcagggatacacctgctgcacgtctgagatggaggacaaactcaaccagcagagcaaa
ctggaatttgagaatttggtggaggagagtagccacaatatgaggacgacatttgtctcc
aggcataaaaagtttgatgagtttttcttggagctgctggacaattctgagaagtctctc
aacagtatgttcacgcggacatacgggaagctgtatatgcagaactctgaggtattccag
gacctgttcactgagctaaagcgctactacacagggggcaacgtcaacctggaggagatg
ctgaatgacttctggtcccggctgctggagcgcatgttccagctgctcaattcccagtac
cacttcacagatgactacctggagtgcgtcagtaaatacacagatcagctcaaacctttt
ggagatgtgcccaggaaactgaaagcccaggtcaccagggccttcatcgctgcacggacg
tttgtccaggggctaatggtgggtcgggaggtcgccaacagggtcgctaaggtaaacata
gttcctgcatgtgtcagagccttgaccaagatgctgtactgtccatactgccgtggtatg
cctggactgaaaccctgtcacaactactgtcacaacgttatgagaggctgtctagcaaac
caggcagacctagatgctgagtggaacctcttcattgatgccatgctgctggtggcagac
aggctggagggacccttcaacatcgaagcagtcatcgagccgattgacatcaagatctcg
gaagctatcatgaccatgcaggacaacagcatgcaagtgtcagccaaggtttttcaaggg
tgtggtcaaccaaaaccatcaggaataggcaggtctgcacggggaatctcagatgtgttc
agcactcgtttcagaccctacactcctgaagagaggccgaccacagcagctggaacaagc
ctggatagactgagggttgtgtggaggacaatgcaacacagtgtgactgacatcaaagag
aagttgaaggagtccaagagattctggtccaacttaccagatgacatctgtgccaagggc
aaactcacagagtccgatgaggagcagtgctggaacagccacactaagggcagatatttt
cctgaagtggtgaaggagggtctaaccaaccaggtgaacaacccagaggtggacgtagac
atcaccagacctgacacactgattcggcaacagatcatggctctgcgtgtcatgactaac
aagctaaagaatgcctacaatggaaatgacatctacttccaagactccagtgacgagggc
agcagctctggcagtggcagtggctgctctgacggctgcacaacagaatttatttttgtt
ggaacagaggctccagtgatcggagccgacagaagcgatgaacgcgcagcagtcgcagct
gcgggcaagtcgctttcctgcggaccctctacactgctggtgatgaccgctctcacattc
ctactttggtcaatgcagactcaatggagataa
DBGET
integrated database retrieval system
