Amphiprion ocellaris (clown anemonefish): 111565175
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Entry
111565175 CDS
T06018
Symbol
jmjd1cb
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aoce03036
]
111565175 (jmjd1cb)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
111565175 (jmjd1cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
BFA1_C
zf-C5HC2
FYVE
Motif
Other DBs
NCBI-GeneID:
111565175
NCBI-ProteinID:
XP_023120954
Ensembl:
ENSAOCG00000017543
UniProt:
A0A3Q1BF40
LinkDB
All DBs
Position
18:11049237..11197289
Genome browser
AA seq
2899 aa
AA seq
DB search
MAVEARPELVGKRFLCVSGDDPPEIGDIGRWPWRSGVIRAVNLRDSDTSDLTVYVEFDDQ
EWEKREWVKVYEDFQLFLLEHQLVWVKRKEGAAAGGGGAGSLLQGTKAKHIQWPALAFKP
VVGKSLLSSVTAVEFLLDRQLDFLSDHSAFQPYQDEVDSLNPVLRDNPQLHEEVKGWLKD
QKVQEIFMQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDP
SMVQMTFLDDVVHSLLKGENIGITSRRRSRSSQNNNSAHMAGGRPSGTTGNIQSHYTRAQ
ANSPRPIMTSSGPNPKGSQGAMASQQQSQSQQSQQPASQSHHSPGSSGREQREQRSSRSS
RRKGSDSSIPEEDKDRKEEPTGRESKSKVKQAVNKRRKGEEDEKKTGLKRLKTDMTSDLS
ESSDSENPHKRTAHSSCSSSSSSSSSSSSSSSSSSSSEPNSENELKTRSSDVKPSAVSKM
EEDEKPLSQGPKMNDSSALIGRMSPWVELQATEDIKKSVVKDAEITKEEEELVAVTQITQ
PPRQLTPLMSDAVQGGIMENSKNAVKASSRSQTPLLSHLHGGGVIDITDDAQATVHRESS
EAVSALLASQKAESTALSPYLPLNPSPVSSPPVPPSPSASEGGRRMEVEPPVQQQQQLGI
MGSGMTAARSLSSKIEFAPSEVIRPVTSMAENVLLVEKEKTVLPHHHLHLHHHQQQQQQH
HTQLQHYTSIHPGIRSPSLSEETRKHPQQQLSPHKMNTAPPTDLAKSKMSPSPNSNSAQL
DPLKQKSQHPNNSLSHSYPSTNPTDLLKTKPHPGMLDISKPKPNTSPEVSKHKIQRYSDT
SPPPAGRLSSKLESAEPQRSGFKPVPPRSESSGVSTCSSTKSPLIIDKNETFTVYRDPAL
VRSDTENSVSATVSSNHVTAYLHPHLHTLHSPSPHSPCLTPASHPHATPHAASHLLAPPH
TSALPHPHLLPPGVLPAMPPPAANLLGGHPRLDTPGGLGHLALPHPAAAHQQQFLQGQGP
PPPPLLAQAHGGAAGLGLYPILWQYPNGTPASYPPGLNLPPTAKWVHPENPVSVNSEASL
RRNTASPWLHQAAGSAGDGLGLLGHVPVRPASADAHRPAVKINTHASPPLSKASMDVHKE
DVDKKGFVDPIRTLTLGQLKQEQTDRSRTPTGKDVHLHRLYLDPHNKTRLTNTQDAVQAA
DRASKYKEENRQILKESIEVAPFTAKIQRASDPGMDRDRERSRDPAFPVRIPALPPPSSK
ASHVHPHAIQSEKSNYFTTLSNSVVNEPPRLYPSKELSSYYNKVSVGAPGVVASVGAAVP
SQGSLSLGSYNSKASLCKPPPLIKHQPEGGEGLAGKITEQLSQQVTLVQPQHQHHTSVDR
IERRSPAISSSSSTSSSSSSVSNHHHHHQQQQHQLRAMPSLHRAPVFHPPTQHALERKEA
AEREKERERERAGYGGRLSPPTLTPIQPVSLVAAGSKTSVEQQKPPTLLPELRDIKGHGN
AAAITSVASAVSGEIITSSTDGWRGGEMIQDRGGVYCGEKGLSRGKPQAAMASVIVRPSA
SAKYDSPVGANKSGAVIHKELPQGRFYPSKVQGEGPRLGENAREPGSGRVIQPNSNLDDM
CFQYKKTSMHGMQGPIGASVTNSVCRTAVSASSAFGIQNKSGTAPSEPGYSVSDRGAFTA
FKTGFGGRVLSHSGLEREREHQEGFGSRTTSPGVSLPPVSSAGTPLIPSSISGSSQPYSP
SFIHLKKHKAALAAAQSRSSLPSAPTSITGNSTLIVDSVDKTPIHNSPPPPSLSQASSTS
VDSSSGSSASGNTTPGKSSPLPNGQSSGSASSSCGQPSNYHKLKKAWLTRHSEEDRNTTA
TTCSTSAKAEKLPSTTTSTSNTTAMSEMIKPCTVNLSASTSSEVEMSKDSASKGDRERQL
EEKLLGAAAGGGEERKAAPLSRRGGKRSYESGSESAGDDSDTSESKMEGRAKRQPKPTYK
KKQNDMAKKKGDNEKDEDDTKPNGIFRSAREKTKLKLASSNGIPRSVLKDWRKVKKLKQT
GESFLQDDSCSEIGPNLQKCRECRVIRSKKGEEPAHSPVFCRFYYFRRLSYSKNGVIRMD
GFSTPDQFDDEALSLWVPGEIDETHLDQTTAKYILSFIGDKFCQMVVTENTAASWVKKDA
KLAWKRAVRGVREMCDACEATLFNIHWVCQKCGFVVCLDCYKAKERRSSKDKELYGWLKC
VKGQPHDHKHLMPTQIIPGTVLTELVTSMHTLRDKHEIKSHCPCMSKQNLLTKLPATNGV
SQVLQNVLNHSNKLSLVKAEAGSQQNSDQVGTKAETNGGGGGGSSPDSDSGSAPVTPPES
QSPLHFLADLAEQKSREEKKENKESLLLGKSMKEDKEEDSLEVLQQCKTTSLVANSTEQG
STLRDLLTTTAGKLKLGSTDAGIAFAPVYSTASQTGKGGRTMPNILDDIIASVVENKIPA
SRQNITTKLSIKQEPVTPSINSNVPAVTEAVKPDKKKSVPVTTALPEDSTNQYPDIPHCW
LNNRRLLWLKDHRNQNNWKLFRQCWKQGQPVLVSGIHKRLNASLWKADSFNQEFADHQGD
LLNCKDQVVSNSGIKEFWDGFEDITKRPKSKDGEPMVYRLKDWPSGEEFMALMPSRYDDL
MKNLPLPEYSDPEGNLNLASHLPSFFVRPDLGPRLCCAYGVAASQDQDFGTANLHVEVSD
VVSVLVYVGVAKGNGVLSKTGVLKRLEEEDLDEGVRRRLKDSSETPGALWHIYLNRDMDK
LREFLHKLCKEQGLDVTLDQDPIREQGWYLSRKQRQRLLDEYGVQGWTVVQFLGDSVLIP
AGAMHQVQNLHSCVQVINDFVSPEHVASSFHLTQELRPNKEEVNYEDKLQVKNILYHCVK
EAVSSLKRSSSEMDEEENL
NT seq
8700 nt
NT seq
+upstream
nt +downstream
nt
atggcagtcgaggctcggccggagctggtcgggaagcggtttctctgtgtcagcggagac
gacccgcctgaaatcggcgacatcggtcggtggccgtggaggtccggggttatacgagcc
gtcaacctccgtgacagcgacacttccgacctgacggtatatgtggagtttgatgaccaa
gagtgggagaagagagagtgggtgaaggtctacgaggatttccagctgtttctactggag
caccagctggtctgggtcaagaggaaggagggagcagcagcaggaggaggaggagcagga
agcctgctgcagggaaccaaggccaaacacatacagtggcctgccctggcgtttaagcca
gtggtggggaagagcctgttgtcgtcggtaacagcagtggaattcttattggacagacag
ttggacttcctgtctgaccattcagccttccaaccataccaggatgaggtggacagtctg
aacccagtgttaagagacaaccctcagctccacgaagaagtgaagggctggctcaaagac
cagaaggtgcaggaaatttttatgcaaggtccctactcgttgaatggctatcgtgtgcgt
gtgtacagacaggactcagccacccagtggtttactggcatcattacgcatcacgaccta
ttcagtcgaaacatggtcgttatgaatgaccaggtgctagagcctcagaacgtggatccc
tcaatggtccagatgacctttctggatgacgttgtccactctttgctgaaaggagaaaac
attggcatcacttccagacggaggtcgcgatccagtcagaacaacaacagtgcacacatg
gcgggagggagacccagcgggaccactggcaacattcagagtcactacacacgagcccaa
gccaacagccctcgccccatcatgacatcatccggccccaaccctaaaggttcccaggga
gcaatggcctcccagcagcagagccagtcgcagcaaagccagcaaccagccagccaatcc
caccactcaccaggaagtagtgggcgggagcagagagagcagcgcagctctcgctcttcc
aggaggaaaggatcagatagcagtattccagaggaggacaaggacaggaaagaggagccc
acaggacgagagtccaagtccaaggtgaagcaggcagtgaacaaacggaggaagggtgaa
gaagatgagaagaagacaggtctaaagaggctcaagactgacatgacatctgatttatca
gagagcagtgactcagaaaacccacacaagaggactgcccactcttcctgctcctcttcc
tcctcatcgtcctcctcctcttcttcctcctcctcctcttcctcttcctcagagcctaac
tctgaaaatgagctaaagactcgcagcagtgatgtaaaacctagtgccgtctccaaaatg
gaggaggatgaaaagccactgtcgcaaggacccaaaatgaatgattcctcagctctcatt
ggacgcatgtccccatgggtggagcttcaagcaacagaggatatcaagaagagtgtggtt
aaggacgcagagataactaaggaagaggaagaattggtggcagtaacacagatcacccag
ccgccacggcagctgacacctctgatgtctgatgcagtccagggtggcatcatggagaac
agcaagaatgctgtgaaagcatcatctcgatcccagacaccattgctgtcccaccttcat
ggaggtggcgtgattgacatcacagatgacgcccaggccactgtgcaccgtgagagttca
gaggcagtatcagcgctgctagcctcccagaaggcagaatccacagccctctcaccttac
ctccctctcaacccctccccggtctcctcgcctcccgtccctccatctccctcggcatca
gagggaggccgcaggatggaggtagagcctcctgttcagcagcagcagcagctaggaatc
atgggaagtggaatgacagcagccaggagcttaagcagcaaaatagagtttgctccctct
gaagtcatcaggcctgtcacatcgatggccgaaaacgtgttgctggtggagaaggagaaa
actgtccttcctcatcatcatcttcatcttcatcatcatcagcagcagcagcagcagcat
cacacacaactgcaacactacacatctatccaccctggcatcaggagtccatctttatct
gaagagacgagaaaacatccacagcagcaactgtccccccacaagatgaacacagcccct
cccaccgacttagccaagtccaaaatgagccccagcccaaactccaactcagctcagctc
gaccccctaaaacaaaaatctcagcaccccaacaactctctgagccactcctaccctagt
acaaacccaactgacctcctcaaaactaagcctcacccaggcatgctcgacatctctaaa
cctaaacccaacacctccccagaggtctctaaacataaaatacaaaggtactcggacacc
tccccacctccagcaggccgtttatcctctaaactggagtcggcagagcctcagcggtct
ggtttcaagccagtgccgccacggtcggagtcgagtggagtcagtacgtgtagcagcacc
aagagtccgctgatcatcgataagaacgagaccttcactgtttacagggatccagcactg
gttcgctctgacacagagaactccgtctctgcaactgtctcttccaaccatgtgacagcg
tatctccatccccatctgcacaccttgcactccccctccccccactccccctgcctcact
cctgcatcacacccccatgccaccccccacgccgcctcccacctcctcgcgcctcctcac
acctccgccctacctcacccgcaccttttaccccccggggtgctcccggccatgccccca
cctgcagccaatctcctcgggggccaccctcggctcgacaccccaggcggtttgggtcat
ctcgccctgcctcacccagcagccgcacaccagcagcagttcctacagggtcagggccct
cctccaccccctcttctagcccaggctcacggcggggcagcagggcttggcctatacccc
atcctttggcagtaccctaatggaacaccagcgtcctaccccccaggactcaacctgccc
cccacagctaaatgggtgcaccctgagaatcctgtcagtgtaaattctgaagcctcgctc
aggaggaacacagccagtccatggttgcaccaggctgctggtagtgctggtgacggtttg
ggtttgctgggccacgttcctgtccggccagccagcgctgatgcccaccgccccgctgtc
aagatcaacacacatgctagccctccactgtcaaaggccagcatggatgttcataaagaa
gatgtggataagaaaggcttcgtggatcccatcaggacgttgacattaggacagctaaaa
caggagcagacggacagaagtcgcaccccaacaggaaaagatgttcacctacatcgcctt
tacctcgatccccacaacaagacccgtctgacaaacacgcaggatgcagttcaggcagca
gaccgcgcgagtaaatacaaagaggagaatcggcagatcctaaaagagagcattgaggtt
gctcccttcactgcaaagatccagcgtgccagtgaccctggaatggacagggacagagag
agaagcagagatccagccttccctgttcgaataccagctcttcctcctccaagctccaag
gccagccacgtccatccgcacgccatccagtccgagaagagcaactacttcaccacgctg
tcaaacagtgtggtgaatgagcctcctagactctacccctccaaagagctcagttcttac
tacaacaaagtatcagttggagccccaggggttgtggctagtgtcggggcggctgtgcca
agtcagggatctctgtcgcttggcagttacaactccaaagcctccctctgtaagccccct
cccctcattaaacaccagccagagggaggagagggcttagcagggaaaatcactgagcag
ctcagccagcaggtgacactagtccaaccccagcatcagcaccacacgagtgtagacagg
atagaacgccgcagccctgccatttcttcttcctcttctacatcatcctcttcatcctct
gtctccaaccaccatcatcaccaccaacagcagcaacaccagctcagggcaatgccatct
ctccaccgagcacctgtcttccatccgcccacacagcacgctctggaacgcaaagaggct
gcagagcgagagaaagaaagggagagggaaagagcgggttatggtggacgcctgtcacca
cccaccctcacacctatccagccagtcagcttagtggcagctggcagcaaaacatcagtg
gagcagcagaagccccccacactgttgccggagctcagggacatcaaaggtcatggaaat
gctgccgccatcacctctgtggcctctgccgtcagtggggagattataacttcatcaaca
gatgggtggagaggtggagagatgattcaggatagaggaggggtgtactgtggagagaaa
gggctgtcaaggggcaagccccaggcagcaatggcatcagtcattgtacgtccatctgca
tctgctaagtatgacagccctgttggtgctaacaaatctggtgctgttattcataaggag
ctcccccaggggaggttctacccatccaaagttcagggtgaaggtccaagacttggcgag
aatgctagagagccaggatctggaagggttatccagcccaactcgaacctggatgatatg
tgtttccagtataaaaagacttctatgcatggcatgcagggacctataggagccagcgtc
acaaactctgtgtgcaggactgcagtttcagcatcatcagcgtttggtatacagaataaa
agtgggacagccccctcagagccaggctactcagtctcagatcggggtgcatttacagcc
tttaaaaccggctttggaggccgcgtgctgagccactcaggactggagagagagcgggaa
caccaggagggctttggctcacgtaccacatcaccaggggtgtctttgcctccagttagt
tcagcaggaacacccctaatacctagctccatttctggctctagtcagccttactctccc
tcttttattcacctcaagaagcacaaagctgctttggctgcagctcagtcgagaagcagc
ctcccttctgctcccacatccataactggaaactccaccctaattgtagattcagtcgac
aaaactcccattcataactcccctcctccaccctctttgagccaagcctcctcaacctcg
gttgacagtagcagcggcagctcagcaagtgggaacacaacaccaggcaagtccagcccc
ttgcctaatggccagtcctctggatcagcctcatcaagctgcgggcagccctctaattac
cacaagctcaagaaagcctggttaactcggcactctgaggaggacagaaacacaactgct
accacgtgctccaccagtgctaaagcagagaaactgcccagcaccaccaccagcacaagc
aacaccacagccatgtcagaaatgatcaaaccctgcaccgtcaacctcagcgcctcgaca
tccagtgaagtggagatgagcaaagacagtgcaagcaaaggtgacagagagagacagctg
gaggagaagctgttaggggcggcagcaggaggtggggaggagagaaaagcggctcctttg
tcgagacggggaggcaaacgctcatacgagtccggttcagagagtgcaggtgatgactct
gacacaagtgagagcaagatggagggccgagccaaacgtcagcctaaaccaacctacaag
aagaaacagaatgacatggccaagaagaaaggagacaatgaaaaagacgaagacgacacg
aagcccaacggtatcttcagatcagccagagagaagacgaagctcaaacttgccagcagc
aatggaatcccccgctctgtgctgaaggactggagaaaggtgaagaagctgaagcagacg
ggggagtctttcctgcaggatgactcgtgctcagaaatcggacccaacctgcaaaagtgt
cgagagtgcagggtgatccgcagcaagaagggcgaagagccggcacattcccccgtcttc
tgtcgcttctactatttcagacggctttcctacagtaaaaacggagttatccgaatggat
ggcttctccactccggaccagtttgacgatgaggccttgagcctgtgggtccctggggag
attgatgagacccacctggaccaaaccacagccaagtacatcctcagtttcataggagac
aaattctgtcagatggtagtgactgagaatactgcagctagctgggttaagaaggatgcc
aagctggcatggaagagagcagtgaggggggtgagggagatgtgtgacgcatgcgaagca
acactcttcaacatccactgggtctgtcagaaatgtggctttgttgtgtgcctggactgc
tacaaggccaaggaaagacggagctccaaagataaagaactatatggatggctgaagtgt
gttaaaggccagccccacgatcacaaacacctcatgccaacacagatcatacctggcaca
gtgctgacagagttggtgacatccatgcacaccctgagagacaagcatgaaatcaaatct
cattgtccctgcatgagcaagcagaacctccttaccaaactacctgccaccaacggagtc
tcacaggttctgcagaatgtgctgaaccacagtaataagctgtctctggtgaaagctgag
gcaggctctcagcagaactctgaccaagtaggaaccaaggcagaaactaacggtggaggt
ggaggaggaagcagtccagacagtgattctggaagtgctcccgtcaccccaccagagtcc
cagtctcctctacacttcctggctgacctagcagagcagaaatccagagaggaaaagaaa
gaaaacaaggaatcactgctgctcggtaaatccatgaaggaagacaaggaggaagacagc
cttgaagtcctgcagcagtgtaaaaccacttcactggtggcgaacagtacagagcagggt
tccacactcagagatctgctcactaccacagcagggaagctgaagctgggttctactgat
gcaggaatcgcctttgcacccgtctactctactgcttcacagactggaaagggtggacgg
accatgcccaatatcctcgatgacatcattgcttcagtagtagagaataaaatccctgcc
agccgccagaacattaccaccaagctgtcaatcaagcaagagcctgtcacccccagcatc
aacagcaacgtcccagctgttactgaggctgtcaaaccagacaagaagaagtcagtacct
gtaaccacagctttgccagaggattcaaccaatcaatatccagacattcctcactgctgg
ttaaacaacagacgattactgtggctcaaagatcaccgcaaccaaaacaactggaagctg
ttcagacagtgctggaaacaaggacagcctgtgttggtgtcagggatccataaacgactg
aatgccagtctgtggaaggctgactcctttaaccaggaattcgcagaccaccaaggagat
ctcctcaactgtaaagaccaggtggtgtccaactctgggatcaaggagttctgggatgga
tttgaggatatcaccaagcgacccaagtctaaagatggagaaccaatggtctacagactg
aaggactggccgtctggagaggagtttatggctctcatgccctcaagatatgatgacttg
atgaagaacttacccctgccagagtattctgatccagaggggaaccttaacctggcctcc
cacctgccatctttctttgtcaggccagatctggggccgagactctgctgtgcctacggt
gtagctgcatctcaggaccaggacttcgggactgccaacctccatgtggaagtctcagat
gtggtctctgttctggtctatgtgggagtagccaaaggcaatggagtcttgtccaaaacc
ggtgtattgaagcgtctggaggaggaagatctagatgagggggttcgaaggaggctgaaa
gactccagtgaaacaccgggggcactgtggcacatctacctcaacagggacatggacaag
ctccgagagttcctgcacaagctctgcaaggagcagggattggacgtgacacttgaccag
gacccaatcagagagcagggctggtacctgagcaggaagcagcgtcagcggctgttggat
gagtatggagttcagggctggaccgtagttcagttcctgggagactctgtccttatacct
gcaggagccatgcaccaggtccagaacctccacagctgtgttcaggtcatcaatgatttt
gtgtctcctgagcacgtggccagctccttccacctgacccaggagctgcgtcccaataaa
gaggaagtcaactatgaggataaactacaggtgaagaacattctgtaccactgtgtgaag
gaggcagtgagctccttgaagagaagcagctctgagatggacgaggaggagaatttatga
DBGET
integrated database retrieval system
