Amphiprion ocellaris (clown anemonefish): 111565183
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Entry
111565183 CDS
T06018
Symbol
trub1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aoce03016
]
111565183 (trub1)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
111565183 (trub1)
Transfer RNA biogenesis [BR:
aoce03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
111565183 (trub1)
Prokaryotic type
111565183 (trub1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
GAIN_A
Pus10_C
Motif
Other DBs
NCBI-GeneID:
111565183
NCBI-ProteinID:
XP_023120974
Ensembl:
ENSAOCG00000017188
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All DBs
Position
18:complement(11377412..11386513)
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AA seq
275 aa
AA seq
DB search
MAGNLGSTVAPVSSSLSRLQALNGLFAVYKKQGPTSADVLNALKEALLKEAGVQNPNPRK
RRKQSLKMGHGGTLDSAASGVLVVGVGNGTKMLSTMLTGSKKYVAVGELGKATDTLDATG
SVILEKDFEHITRPDVEAKLKAFTGDIMQVPPLYSALKKDGQRLSVLLKKGHKVEAKPAR
PVTVYNLTLLEFKPPLFTLDIECGGGFYVRSLVDDLGKALSSCAHVKELTRTKQGQFTLQ
EHALHEEQWTLEHILQSLQCCSEGELEPEPPEAET
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaatctgggcagcaccgtggctccggtgtccagctctctgtccagactccag
gctctgaatggactgttcgcggtttacaagaaacaaggaccgacctccgcagacgtgttg
aacgctctgaaagaagctctgctgaaggaagcgggagtccagaacccgaacccgaggaag
aggaggaagcagagcctgaagatgggtcacggagggactctggacagcgcagccagcgga
gtgttggttgttggtgttgggaatggcacaaaaatgctcagtacaatgttgactggttca
aagaaatatgtagctgtaggggagctggggaaagccacagacactcttgatgccaccggc
agtgtgattcttgaaaaagacttcgagcacattaccaggccggatgttgaggcaaaactg
aaagctttcactggtgatatcatgcaggtgcctccactctactcagcgctgaaaaaggac
ggccagcgtctgtctgtcctactgaagaaaggtcacaaggttgaggccaaaccagccagg
ccagtcaccgtgtacaacctcaccctgctggagttcaagcctcctctcttcactctggat
attgagtgtggtggtggattctacgtcagaagcttggtggatgacctgggaaaagctctg
tcatcgtgtgctcatgtgaaggagctgaccaggaccaagcagggtcagttcaccctgcag
gaacacgctttacatgaggagcagtggacactggaacacatcctgcagtcgctgcagtgc
tgctcagagggagagctggagccagaaccaccagaggctgaaacctga
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