Amphiprion ocellaris (clown anemonefish): 111565187
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Entry
111565187 CDS
T06018
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04120
Ubiquitin mediated proteolysis
aoce04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111565187 (syvn1)
04120 Ubiquitin mediated proteolysis
111565187 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111565187 (syvn1)
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111565187 (syvn1)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111565187 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
111565187
NCBI-ProteinID:
XP_023120979
Ensembl:
ENSAOCG00000016684
LinkDB
All DBs
Position
13:complement(30386570..30403794)
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AA seq
630 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWIFHLRVLSLMGLLAAMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQTPAPAQAPPPAPAAPANAP
AAPPPNVAPGMLPGFPPGIFPFWGPFPAVPPPAAAAPAPGATDAPQSSTEATQTAGSTQP
TSSTADAATSAAAAPGSTLPGFPFSFPPPPFPAAPWLPMPPPPPFVSSMPPPPPSLSRLS
EEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLSPPRTEGSAGEASG
TNQTPATATASSTTESLSTEKDSSISDQVNGATVSSQPADSTSTSSDTERKENMDDGVVE
DEGGEPNAAELRRRRLRKLETASSPPPPDN
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagctttggtgactgccaccagtctggcattgactggagctgtggtggcg
cacgcttacttcctcaaacaccagttctacccgacagtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcatttgtgttggtgtttctgctgggaaagttc
atgaggaaggtcttttttgggcagctaagggctgcagaaatggagcatctcatcgaacgc
tcctggtatgcggtgaccgagacgtgcctggctttcactgtgttcagggatgatttctcc
cctcgttttgttgccctcttcaccctcttgctcttccttaagtgcttccactggctggct
gaggaccgggtggactttatggaacggagtccgaacatatcatggatttttcacttgaga
gtattatctctcatgggactgctggctgccatggacttcctgtttgttaaccatgcctgc
catagcattattaccagaggagcttcagtccagcttgtttttggatttgagtatgccatc
ctgctgaccatggtgttgacaaccttcatcaagtatgttctgcacactgttgacctgcag
agtgagaatccctgggacaacaaggccgtctacatgctctacactgagctcttcacaggt
ttcattaaagtgctcttgtacattgccttcatgaccattatgataaaagtccacaccttc
cccctgtttgccatccggcccatgtatctggccatgaggcagttcaagaaagctgtaaca
gatgctattatgtccagaagagctattcgcaacatgaatacactataccctgatgctact
cctgaagatctgcaggcctccgacaacgtctgcatcatctgtcgagaggaaatggtcact
ggggctaagaagctaccttgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgtcctacctgtcgcatggacgtcctccgggcttcaaataacaac
cagactccggctccagctcaggctccgccccctgccccagcggcacccgccaacgccccc
gcagccccgcctcctaacgtggctccaggcatgttacctggttttcctccgggcatcttc
cccttctggggtcccttccctgcagtgcctcctcctgctgcagcagctccagctcctggt
gctactgatgctccacagagcagcaccgaggcgacacagacggctggctccacccagccc
acatcatctactgcagacgctgctacatcagcagcagctgcccctggatcaacactccca
ggcttccccttctctttcccccctcctcccttccccgctgcaccatggctgccgatgcca
ccacctcctccctttgtgtcatcgatgcctcctcctcctccgtctctctcccggctgtca
gaggaggagctgagagagttggaggcagaaggccgacgaggccttgaggccagactccag
tgtctgcaaaacatccacaccctgctggatgctgccatgctgaacatccaccactacctc
agcaccgtcgccactctctctcctcctcggactgagggcagcgctggagaagccagcggg
acaaaccaaacgccagcgactgctacagcctccagtaccacagagagtctgagcacggag
aaggattcatccatctccgatcaagtgaatggagctacagtctcttctcagcccgctgac
tccacctccacctcctcagacacggaaagaaaagaaaacatggacgacggagtggtggag
gacgagggtggagaaccgaacgccgctgagctgaggcgccgccgccttcgtaagctggag
acggcgtcgtcacccccgcctccagacaactga
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