Amphiprion ocellaris (clown anemonefish): 111565431
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Entry
111565431 CDS
T06018
Symbol
tnpo1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111565431 (tnpo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111565431 (tnpo1)
03009 Ribosome biogenesis [BR:
aoce03009
]
111565431 (tnpo1)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111565431 (tnpo1)
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
111565431 (tnpo1)
Pre-60S particles
111565431 (tnpo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
HEAT_2
Arm
Vac14_Fab1_bd
TOR1L1_N
Cnd1
IBN_N
TPR_IPO5
HEAT_EF3_N
TPR_DNAAF5
HEAT_MROH2B_C
PDS5
Adaptin_N
CEP104-like_TOG
HEAT_GCN1_C
MMS19_C
Ltn1_1st
UNC45-central
Dopey_N
TPR_TTI1_C
VPS15-like_hel
HEAT_DAAF5
RTP1_C1
DUF3689
Motif
Other DBs
NCBI-GeneID:
111565431
NCBI-ProteinID:
XP_023121259
Ensembl:
ENSAOCG00000008154
LinkDB
All DBs
Position
17:complement(16812897..16838167)
Genome browser
AA seq
890 aa
AA seq
DB search
MECEWKPDEQGLQQILQLLKESQSPDTSTQRSVQQRLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHYQNFPNGVSDFIKSECLQNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCLLLDSEDYNTCEGAFGALQKICEDSAEILDSDMLDRPLNIMIPKFL
QFFKHSSPKIRSHAIACVNQFIISRTQALMLHIDPFIENLFALATDEEPEVRKNVCRALV
MLLEVRLDRLLPHMHNIIEYMLQRTQDHDENVALEACEFWLTLAEQPVCKEVLCGHLSQL
TPVLVNGMKYSEIDIILLKGDIEEDEAIPDNEQDIRPRFHRSRTVAQQHEGDGIEEEEDE
DDELDDDDTISDWNLRKCSAAALDVLANVFRDDLLLHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLVQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAFILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNQLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHQSQPDQYEAPDKDFMIVALDLLSGLAEGLGGTIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
LISVCNNATWAIGEISIQMGPEMQPYIAMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPGGVVQDFIFFCDAVA
SWVNPKDDLRDMFYKILHGFKNQVGEENWRRFSDQFPMPLKERLATFYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgagtggaagccagacgagcaaggacttcaacaaattttacagctgcttaaa
gagtctcagtcaccagatacgtccacacagagatccgtccagcaaagactcgagcagctg
aaccagtatccagactttaacaactatttgatatttgttttgacgaagttaaaatcggaa
gatgaacccactcggtccctgagtggactgatactgaagaataatgtgaaagctcactat
cagaacttccctaatggcgtgtctgatttcatcaagagcgagtgcctccaaaacatcgga
gactcttctcctctcattcgggccactgtgggtatcctcatcaccaccattgcctccaag
ggagagctacaaaactggccagagcttctgcctaaactctgcctgctgctggattctgag
gactacaacacatgtgagggagcatttggagccctgcaaaagatctgtgaggactccgct
gagatcctggacagtgacatgctggatcgcccacttaacattatgatccctaaattcttg
cagtttttcaaacacagcagtccaaaaatcaggtctcatgccattgcctgcgtcaatcag
ttcatcatcagcaggactcaggctcttatgctacacatcgaccctttcattgagaacctg
tttgcactagcgacagatgaggagccagaggtgaggaagaatgtttgcagagctctagtt
atgctgctggaggttcgcctggatcgtctcctgccacacatgcacaacatcatagagtac
atgctacagaggactcaggaccatgatgagaatgttgccttggaggcctgtgaattctgg
cttacactggcagagcagccagtgtgtaaagaagtgctgtgtggtcacctctcccagctc
acaccggtgcttgtcaacgggatgaagtactctgagattgacattatcctgctcaagggg
gacattgaggaggatgaggccattccagacaacgagcaagacatcagaccacgcttccac
cgctcccgcacagtcgctcagcagcatgagggtgatgggattgaagaagaagaggatgag
gacgatgaactagacgatgatgatacaatatctgattggaacctgcgcaagtgttcagcg
gcagcattggatgtgttggccaatgtgttcagggacgatctactgctacacattctaccc
cttctcaaagagctgctcttccatccggagtgggtagtcaaagagtctgggatcctagtg
cttggggctatagctgaaggctgtatgcagggcatgattccatacctgcctgagctcatc
ccccacctcgtccagtgtttgtctgacaagaaggccctggtgcgatccatcacctgctgg
acactgagccgctatgcgcactgggttgtcagccagcccccagatacttacctgaagcct
ttaatgacagaactgctcaaacgtattctggatagcaacaagcgcgtgcaggaggctgct
tgcagtgcctttgccactctggaggaggaggcttgtacagagctcgtgccctacctggca
ttcatcctggacacactggtgtttgctttcagcaagtaccagcacaaaaatctgctcatt
ctctacgacgcgataggaacacttgcagattcagtgggacatcatctcaataaaccggag
tacatccagatgttgatgcctccattgatccagaaatggaaccagttgaaagatgaagac
aaagatctcttccctttattagaatgtctgtcttcagtagctactgccctgcagagtggc
ttcttgccctactgtgagcctgtgtaccaacgctgtgtcaatctggtccagaagaccctc
gctcaggccatgcttcatcagtcccaaccagaccagtatgaggcccctgacaaagacttc
atgatcgtggctttggatcttcttagtggacttgctgagggtttgggaggcacaattgag
cagctggtcgcccgtagcaacatcctcactctcatgtatcagtgcatgcaggacaaaatg
ccagaggtgcgtcagagttcttttgctctgcttggggatctgaccaaggcttgtttccag
catgtcaaaccatgcattgctgattttatgcccatactgggtactaatttaaacccagag
ttaatatcagtgtgcaacaatgcaacatgggccatcggagagatatctatacaaatgggg
cctgaaatgcagccatacattgccatggtgctgcaccagctggtggagatcattaacagg
cccaacaccccaaagactctactggagaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcacccatgctacagcagtttataagaccctggtgcacctct
ctacgaaatataagagacaatgaggagaaagactctgcattcagaggaatttgcactatg
atcagtgtcaatccaggaggtgtagtgcaggattttatattcttctgtgatgcagtggcc
tcctgggtaaatccaaaagatgatctcagagacatgttctacaagatccttcatgggttt
aagaaccaggtgggagaagaaaactggaggcgcttctcagatcagttcccgatgccgctg
aaggaacggctggcaaccttttatggggtgtaa
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