KEGG   Amphiprion ocellaris (clown anemonefish): 111565513
Entry
111565513         CDS       T06018                                 
Symbol
seh1l
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013  Nucleocytoplasmic transport
aoce04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    111565513 (seh1l)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    111565513 (seh1l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aoce03019]
    111565513 (seh1l)
   04131 Membrane trafficking [BR:aoce04131]
    111565513 (seh1l)
Messenger RNA biogenesis [BR:aoce03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     111565513 (seh1l)
Membrane trafficking [BR:aoce04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    111565513 (seh1l)
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 EIF3I WDR55 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT140_1st
Other DBs
NCBI-GeneID: 111565513
NCBI-ProteinID: XP_023121379
Ensembl: ENSAOCG00000005325
LinkDB
Position
9:complement(32882316..32890847)
AA seq 415 aa
MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSENGEWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIKRTTLVDSRTSVTDVK
FAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHPP
MFAVGSDDSNVTYGGKVQIYEYNENTRKYGKAETLMTVTDAVHDIAFAPNLGRSFHVLAI
ATKDVRIFKLVPMRKESTSTGPTKFEVQTVAQFDNHNSQVWRVSWNITSTLLASSGDDGC
VRLWKANYMDNWKCTGILKGDGSPLTGSSGQPTAMSTVVGSSVQTSQNALNGMSAGRYFF
PPLDPPRAGTRYGHLLPPSSLIEHCDAEPIQPQPQALPHRLSSRSLLPLPEAEGQ
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgtttgtagctcgtagcatcgcagcagatcataaagatctaattcacgatgtttcctac
gatttccacggccgtagaatggcaacttgctccagtgaccaaagcgtcaaggtttgggac
aaaagtgagaacggagagtggcactgcacagccagctggaagacacacagtggatccgtg
tggagagtgacctgggctcatcctgagtttgggcaggttcttgcttcctgctcctttgac
agaacagctgctgtctgggaggagattgtaggggaatctaatgacaaacagagaggactg
agccactggataaagagaaccactctagtggacagtagaacatcagtgactgatgtgaag
ttcgccccgaaacatatgggcctgatgctgaccacctgctctgcggacggagtggtgagg
atctacgaggctcccgatgtgatgaacttgagtcagtggtccttgcagcatgagatctcc
tgcaagctcagctgtagctgcatctcttggaacccttccagctcccgtgcacaccctcca
atgtttgctgttggaagtgacgacagcaatgtgacgtatggtgggaaagttcagatctat
gagtataatgaaaacacccggaaatatggtaaagcagaaacactgatgaccgtcacggat
gcagtccatgacatcgcatttgctccaaatcttggaagatctttccatgtgctcgccatt
gcaacaaaagacgtcagaatatttaagcttgttcctatgaggaaggagagcacctctaca
ggacccaccaagtttgaggtgcagactgtggctcagtttgacaaccataattcccaggtg
tggcgtgtgagctggaacatcactagcaccctgctggcctcctcgggggatgatggctgt
gttcgcctctggaaagctaactatatggacaactggaagtgcacaggcatcttgaaggga
gacggcagcccgctgacaggttcatctggtcagcctacagccatgagcactgtggtgggc
tcctctgttcagacctcccagaatgccctgaatgggatgtctgcaggaaggtatttcttt
ccacctctggaccctcccagagcggggaccaggtatggtcacctgctgcctccctcctcc
ctcatagagcactgtgatgctgagcccattcagcctcagccacaggctcttcctcacaga
ctctcctcaagatcactgctgcccctacctgaggctgaagggcaatga

DBGET integrated database retrieval system