Amphiprion ocellaris (clown anemonefish): 111565713
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Entry
111565713 CDS
T06018
Symbol
tcea3
Name
(RefSeq) transcription elongation factor A protein 3 isoform X1
KO
K03145
transcription elongation factor S-II
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111565713 (tcea3)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111565713 (tcea3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Zn_ribbon_TFIIS
Med26
HVO_0758
Motif
Other DBs
NCBI-GeneID:
111565713
NCBI-ProteinID:
XP_054869952
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Position
9:complement(10071447..10082789)
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AA seq
739 aa
AA seq
DB search
MTREEDLIRIAKKLDKMVSRNNTEGAMDLLKELQGFNMTLKLLQETRIGMSVNGIRKHCT
DEEVIALAKVLIKDWKRLLDSGHSNSEKPTEMKNGLDSGKTAASSNSSPSERHSSHRRLD
VKPKHDSDPDKTPSDRKEKHNDEHKKRHVDDPRDEKHREDLQNEKHLQEIRKEKPAESPK
PETDNKKQKHTQDQQGEKHKSEQRKERPFEEPKKMKHVEELKKEKHPEELKKHNGSGDMK
KDKCREESRHERPINTMQRDSEKHTDAHRPIFERRGVLDSSILYPTRFPSPPRHARPPLP
IKRPSLDVKKERKDGKDSSSRHPRPPRPSSPQTKRPSVEVKKERKAPPDPNAPITPLPLH
LHPPPPRKEPPDPNAPLPPLPLHLHPPPPPTKRPSLDGKKEKDSRKASTDSKPPPQKKTS
DHIKKDRKDSVDSKVSKKHSDEAKRERKDSSDSKPPPPKKPSLEVKKEKHRKDSSDSKSS
QPVKRHSTESKPDRRESTDSKKSSSPPAKKLTAERRESHSSKPPQPRPPQRKPSTDSIDR
KGKIEAPKTPTTPTSPMSPSFSSSGGPLSPHLSTGDSVRDKCIEMISAALRTDNDYKDFG
ANCDGMAVEIEHHIYQETKATDMKYKNRVRSRISNLKDPKNPGLRRNVLAGSIDLHRIAT
MSAEEMASDELKQLRNVLTQEAIREHQMAKTGGTTTDLLQCSKCKKKNCTYNQVQTRSAD
EPMTTFVLCNECGNRWKFC
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgactcgagaggaagatctcatccggattgcaaaaaaactggacaagatggtgtctaga
aataacacggagggcgctatggacctcctgaaagaactccaaggcttcaatatgacactt
aaacttctccaggaaacaagaatcggcatgtctgtgaatggtatcaggaagcactgcacg
gatgaagaagttattgctttggcaaaggtcctcataaaagactggaaaagacttctggac
tctggccattctaactctgagaaaccgactgaaatgaaaaacggcttggactccggcaaa
acggcagcgtcttccaacagctccccctcagagagacacagcagtcacaggagactggat
gtcaaacccaaacacgactcagatcctgacaaaacaccctctgatagaaaagaaaaacac
aacgacgaacacaaaaagaggcacgtggatgacccaagggacgaaaagcaccgcgaggac
ctgcaaaatgagaagcatctccaagaaatcagaaaagagaaacctgcggaaagtcccaaa
ccggagacggataacaagaaacagaagcacacgcaggaccagcaaggcgaaaaacacaag
tccgaacagaggaaagaaagaccgttcgaggagccgaaaaagatgaaacatgtggaagag
ctcaagaaagagaaacaccccgaggagctgaagaagcacaacggttcaggtgacatgaag
aaggacaaatgcagggaagagagtcgacacgagaggccgattaacacgatgcagcgagac
agtgagaagcatactgacgctcacagaccgatatttgaaaggagaggagtgttggacagc
agtattctgtatcccacccgcttcccgtctcctcctcgacacgctcggcctcctcttccc
atcaaacgtccgtctttggacgtgaaaaaggaaaggaaggacgggaaagactcttcctcc
cgacatcctcgtcctcctcgacccagctccccgcaaaccaaacggccttcggtggaagta
aagaaagagaggaaagctccgccggacccaaacgctccgatcactcctcttcctcttcac
cttcatcctcctcctccaagaaaggagcctcctgaccccaacgctcctcttcctccactg
cctcttcaccttcaccctcctcctcctccgacaaagcgtccctcactggatgggaaaaag
gaaaaagacagcaggaaggcgtctacagactccaagcctcccccgcagaaaaagacgtca
gaccacataaagaaagacaggaaagactcagtggatagcaaagtgtctaaaaagcactca
gatgaagccaagagagaaaggaaagattcgtctgactctaaaccgcctcctcccaaaaag
cccagtttggaggtgaaaaaagaaaagcacaggaaggattccagtgactcaaagtccagc
caacctgtgaaacgtcattcaacggagtccaaacctgacagacgggaatcgactgattca
aagaaaagcagctcaccaccagcaaagaagctcacagctgaaaggagagagtctcacagc
tccaaacctcctcagcccagacctccacagaggaagccctctactgacagcatcgacagg
aaaggcaaaattgaagcccctaagacccccaccaccccgaccagcccgatgtcgcccagc
ttcagctcttctgggggtccgctgtcccctcacctttccaccggagactccgtcagagac
aagtgcattgagatgatttcagctgctctgcgcaccgacaatgactacaaagactttgga
gctaactgtgatgggatggcagtggagattgaacatcatatctaccaggagacaaaggcc
actgatatgaaatataagaacagggtgcggagccgcatcagcaacctgaaggaccccaag
aaccccggacttcgcagaaacgtcctcgcaggaagcatcgacttacatcgcatcgccacc
atgtctgctgaggaaatggccagcgacgagctgaaacagctgaggaacgttctcacccag
gaggccatcagggagcaccagatggccaaaactggaggcaccaccaccgacctgctgcag
tgcagcaagtgcaagaagaagaactgcacctacaaccaggtgcagacacgcagcgctgac
gagccaatgaccacatttgttctgtgcaacgagtgtggcaaccgctggaagttctgctga
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