Amphiprion ocellaris (clown anemonefish): 111565949
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Entry
111565949 CDS
T06018
Symbol
exosc8
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111565949 (exosc8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111565949 (exosc8)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111565949 (exosc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111565949
NCBI-ProteinID:
XP_023122055
Ensembl:
ENSAOCG00000015357
LinkDB
All DBs
Position
14:10698726..10703032
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AA seq
277 aa
AA seq
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MAAGFKTAEPLEYHRSFLKENCRPDGRELSEFRTTTLNIGSISTADGSALVKMGNTTIIC
GIKAELTNPTVEAPGKGYIVPNVDLPPLCSSRFRPGPPGEQAQAASQFIADVIESSEVIK
TEDLCIDRGKLCWVLYCDIMCLDYDGNILDACIIALLAALKNTQLPEITINKETCTPEVN
PAKRCGLHIHKHPVGASFCVFDGSILIVDPTAEEESLSTSQLTVVTDEAGRLCSLHKPGG
TSLSGEKLQECISRATARQREIQKLIDKVIQSVKTAQ
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggtttcaagactgctgagcctctggagtaccacaggagctttctgaaagaa
aactgtcgacctgatggacgggagctgtctgaattcagaactacaacactcaacataggg
tccatatccacggcagatggctcagccctggtgaagatgggaaacaccacgatcatctgt
ggaatcaaagcggagctgacgaacccgacagtggaagcacctggtaaaggttacatcgtg
cccaacgtggacctgccgcctttgtgttcctctcggttccggccaggtccaccaggagaa
caggcccaggctgccagccagttcatcgctgatgtaattgaaagctctgaagtgattaaa
acagaggacttgtgcattgacagaggaaagctatgctgggttctctactgtgacattatg
tgtctcgattacgacgggaacattctggatgcctgcatcattgccctgctggctgccctg
aagaacacacaactcccagaaatcaccatcaacaaggagacgtgtacaccagaggtgaat
ccagcaaagagatgtgggctgcacattcacaaacatccagttggggcatctttttgcgtc
tttgatggctccatactgatcgtcgaccccacagctgaggaagagagtctgtcgacctca
cagctcaccgtggtgacggatgaggcaggtcgactctgctctttacacaaaccaggcggg
acgtcattgtcaggagagaaactgcaggagtgtatcagccgagcaacagcacgacagaga
gagatccagaaactcattgacaaagttatacagagtgtgaagacggcacaatga
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