Amphiprion ocellaris (clown anemonefish): 111566162
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Entry
111566162 CDS
T06018
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RLIM
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aoce04121
]
111566162 (rlim)
Enzymes [BR:
aoce01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111566162 (rlim)
Ubiquitin system [BR:
aoce04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
111566162 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
111566162
NCBI-ProteinID:
XP_023122386
Ensembl:
ENSAOCG00000024513
LinkDB
All DBs
Position
13:22336923..22343722
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AA seq
682 aa
AA seq
DB search
MEGSDSLEQNGSDQPESQRRRQLDRLDREEAFYQFVNNLSDEDYRLMRDNNLLGTPGEVT
EDELLSRLHQIKDGPEPQSNTPSTESAEDPVEQPESSEDPASGDSLLDWLNTVRRTGNTT
RTGHRGNQSWRAVSQTNPNSGDFRFSLEISVNRNLAEQQAAAEGEQQSPEQSPEDPPEQS
PEDLPEQSPENPPEQSPEDPREPSTELSPEQSPEIQEVGANVEPQVPMETEVVEEPVVEE
LAVIVEPEPELEEIVSQEVLGEPPSSPAALPVQPPLCPSPRRGQRRARSRSPEPRRTRAR
LARSRSPLNLDQLDALPNPRYAYSSQSPSSSTDASPVPQVEGSSRTRQHVLSRQSTTEGD
VQASRAGAESVAEAQTTGSQEGEAAAGEGGAAGRRPPTIMLDLQVRRVRPGEYRQRDSIA
SRTRSRSQNSNNTFLYESERGGFRRTFSRSERAGVRTYVSTIRIPIRRISDAGLGEATSM
ALQSMIRQIMTGFGELGYLMDSDSDSSDSNRGANTPADLEAPNNPDATATDGPAADVDEQ
PVAAGVRGRTVETDMDEGLSTGPPISGGRARPRPPISLEEPSSLPFLRLAHFFLLNDDDE
DQPQGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLS
ENSTCPICRRAVLVSANRESVV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaagggtctgacagtttagagcagaatggcagtgaccagccagagtcacagcgcaga
aggcagctggaccgcctggacagggaggaggccttctaccagtttgtcaacaatctcagt
gatgaggactatcgcctcatgagagacaacaatcttttgggcactccaggagaggtaaca
gaggatgagctgttaagtagacttcaccaaatcaaagatggaccagaaccgcaaagcaac
acccctagtactgaaagtgcagaagatccagttgaacaacccgaaagctctgaggatcct
gccagcggggatagtctcctggactggctgaacacagtgaggcgcacaggaaatacaacc
agaactggtcatcgtgggaaccagtcatggcgggctgtaagccaaaccaacccaaacagt
ggagattttcgcttcagtctggaaatcagtgtgaaccgcaatctggctgaacagcaggca
gccgctgaaggggagcaacagtctccagagcaatctccagaagaccctccagagcagtcc
ccagaagaccttccagagcagtctccagaaaaccctccagagcagtctccagaagaccct
cgagaaccgtctactgagctgtctccagaacagtctccagagattcaggaagtcggagca
aatgttgaaccacaggttcctatggagacagaagtagtggaagaaccagttgtagaagag
ctagctgtcatagtggaacctgagcctgaactagaagagattgtttcgcaagaagtttta
ggagaacctcccagctcacctgctgccctgccagtacaacctccactttgtccttctcca
cgcagaggacaaaggagggcccgcagccgtagcccagaaccacgcaggactagggcacgt
ttagccagaagccgttcccctctcaacttggatcagcttgatgctctccctaatccacga
tatgcttatagctctcaaagccccagttcttccaccgatgcttctcctgtgcctcaagta
gagggcagttctcggactcgacaacatgttctttccaggcaaagcaccacggaaggtgat
gttcaggcatctagggctggtgcagaatcagtcgcagaagcccaaaccactggatctcag
gaaggagaagctgctgcgggagaaggaggagccgcagggcgtcgtccccctactattatg
ctagatctccaggtgcgtcgtgtgcgcccaggtgaatatcggcaaagagacagcatcgcc
agtcgaacccgctcacgctcccaaaactcaaacaacacatttctttatgagagtgagcgt
ggtggatttcgtaggactttctctcgctctgaacgtgctggtgtgaggacctacgtcagt
actattcgcatccctattcgaagaatctctgatgcaggtttgggagaggcaacctcaatg
gctctccagtcgatgattcgacagattatgactggttttggtgagcttggctacctcatg
gattctgactccgattcttcagattcaaaccgtggagcaaacacgcctgcggacctggaa
gctcctaacaacccagatgctactgcaactgatggccctgctgctgatgttgacgagcaa
cctgttgctgctggagtcaggggaaggacagttgagactgatatggatgagggcctttcc
actggtccacctatctctggcggcagggctcgacccaggccccctatcagcctagaggag
cccagttcactgcccttcctgcggcttgctcacttctttctcttaaatgatgatgatgag
gaccagccccaggggctgaccaaagaacagattgacaacctctccatgcgcaactttggt
gagagtgatgccttgaagacttgcagtgtctgcataacagagtatgcagaagggaacaag
ctacgtaagcttccctgctcacatgagtaccacgtccactgcatagatcgctggctgtcc
gaaaactcgacttgccccatctgccgcagggctgtcctagtgtcagccaaccgagagagt
gtagtgtaa
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integrated database retrieval system
