Amphiprion ocellaris (clown anemonefish): 111566238
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Entry
111566238 CDS
T06018
Symbol
irx1a
Name
(RefSeq) iroquois-class homeodomain protein IRX-1a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111566238 (irx1a)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
111566238 (irx1a)
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
111566238
NCBI-ProteinID:
XP_023122514
Ensembl:
ENSAOCG00000023502
UniProt:
A0A3Q1D139
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Position
9:25309050..25313413
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AA seq
494 aa
AA seq
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MSFPQLGYPQYLSASQAVYGSERPGVLTPSSRGGSTEIGGSPSATAAAVTSVLGMYANPY
AHNYSAFLPYTSADLALFSQMGSQYELKESPGVHPASFAAHTSPAFYPYGQFQYGDPARP
KNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKV
TWGRSKEDGEDGNLFGSGDEAEKNEDEEEIDLESIDIDKIDDNDGDQSNEDDDDKSTEGS
RDLRGGVGAAGELDSLEKRRAFALQAHEAFEKSKSTISVHQGSKDNSDGNNNNTTRVLSP
DRPGSFPLPSNNKPKIWSLAETATSPDSSSQKPTSPCGPGVTTHPSAPHHQIQTHPAFLP
SHGLYTCQIGKFHNWTNGAFLGQNSLLNVRSFLGVNQHHHPHHNHHLPAQQQQPTSVVVS
PVAASAALSNDSKAGAETHSPKHIDHENGVRSDSPPTQTLKSSFRPIHDRSSLPSSARSP
QDATQRVLTALSSA
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttccccagctaggctacccgcagtacttaagtgcctcccaggcggtgtacggg
agcgagagaccgggagtgcttacgccgtcgtcgcggggagggagcaccgaaatcggggga
agtccgtccgccaccgcggcggccgtcacatcggtgttgggcatgtacgccaacccgtac
gcacacaactacagcgctttcttaccgtacaccagcgcggacttggctcttttctcacaa
atgggatcccagtatgagctgaaagaaagtcctggcgtccatcctgccagcttcgcggcc
cacacgtctcctgccttctatccatacggtcagttccagtacggagacccggccaggccc
aagaacgccacccgggagagcaccagcaccctgaaggcctggctcaacgagcacaggaag
aacccgtacccgaccaagggggagaagatcatgctggccatcatcaccaagatgacgctg
actcaggtctccacatggttcgccaacgccaggaggaggctcaagaaggagaacaaggtg
acctggggcaggagtaaagaggacggcgaggacgggaacttgttcggcagcggagacgag
gcggagaaaaatgaagacgaggaggagattgatttggagagcatagatatcgacaaaatc
gacgacaacgacggggatcaaagcaacgaggacgatgacgataaatcaacggagggcagc
agggacctcaggggcggcgtcggagcggctggagagttggacagcttggagaaaagacgg
gccttcgccctgcaggcccacgaggcctttgagaaatctaagagcacaatttcagttcac
caagggagtaaggacaactcggacggcaacaacaacaacacaactagagttttgtccccg
gacagaccagggagttttcctctcccgtctaacaataagcccaaaatctggtctttggca
gagaccgccactagtccagatagttcctcacagaaacctacgtccccttgtggccccggg
gtcacaactcacccgtcagctccccaccaccagatccagacccacccggctttcctcccc
agccacggactgtacacatgccagattgggaagttccacaactggacgaatggggctttc
ctgggccagaactccctgctgaatgtgagatcgtttctgggagtaaatcagcaccatcac
ccccaccacaaccaccaccttccggcccagcagcagcagccgacctccgtggtggtgtcg
ccggtagcagcttcagcagcgctcagcaacgacagcaaggccggagcagagacccacagc
cccaaacacatagaccatgaaaacggtgttaggtctgattcacctccaacacagaccctc
aagtcttcctttcgacccatccatgacagatcctctctgccttccagcgccaggagtcca
caagacgccacgcaacgggtcctcactgccctctcctcggcttga
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