Amphiprion ocellaris (clown anemonefish): 111566339
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Entry
111566339 CDS
T06018
Name
(RefSeq) protocadherin gamma-A10-like
KO
K16494
protocadherin beta
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aoce04515
]
111566339
Cell adhesion molecules [BR:
aoce04515
]
Cadherins
Protocadherins
111566339
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_FAT4_N
Ig_CLSTN
Ig_Cad99C_N
Cadherin_CELSR2_9th
Big_9
7TM_GPCR_Sri
Ig_BT4661_3rd
Peptidase_S55
Bact_surface_Ig-like
DUF7030
Motif
Other DBs
NCBI-GeneID:
111566339
NCBI-ProteinID:
XP_035802552
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All DBs
Position
13:complement(18983756..18986720)
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AA seq
812 aa
AA seq
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MFFMWMIAGRSRWQALVVILCLLKLSSVSGQARYSIPEEQAEGSFVGNIARDLGLDVARL
ISGKARIITKGSRQYVDLNRDKGTLVIKEQIDREELCGKTTPCSFSFEVILENPIQLYRV
TVEVIDINDNSPSFPKDEINLKIVENAASGTRFSLEGADDPDVGINDIQKYTLKPLDNFK
LEVQSQPDGGRFIEMVLQTPLDREKEETHTLVLIASDGGEPHRSGTVRIHITVLDANDNA
PVCSQPVYKADVKENSPEGTVVTTVSANDADKGHYGEVMYSIAHVAKEAKQLFALNVKTG
EIKVTGKLDFEKSKTYQLNVQASDHGGYTDTCKVIIQVIDENDNVPIIQLMSFSNSISED
SPPGTTIAVVNVDDEDSDGNGIVKCSINSDVPFKIESSLTGYYTIVTDNFLDRESVPEYN
ITITVSDQGSPPLTSSKNINVKVSDVNDNPPKFSQSEYSKTVPENNSPGISVFALSARDA
DWGQNARVSYFLEEKEINGLAVSSLVSVNSENGVVHAVRSLDYEQIKWFEFNVTARDAGS
PPLSSVATIRIIVQDQNDNPPQVLYPVQTGGSVVAEMVPRSADVGYLVTKVVAVDVDSGQ
NAWLSYKLQKATDRALFEVGSQNGEIRTIRQVSDKDAVKQRLSVIVEDNGQPSRSATVIV
NVAVADSFPEVLSEFSDFPHDKEYNDNLTFYLVLALAVVSFLFITCLVVIISVKIYRWRQ
SRILYHSNLPVIPYYPPRYSDTLGTTGTLQHVYNYEVCRTTDSRKSDCKFGRAGSQNVLI
MDPSCSGTMQRMQSEKSILDEPDSPLEVRWNI
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcatgtggatgatcgctggcaggtcccgatggcaggcactggttgtcattctt
tgtctgttgaagctgagctcggtgagcggtcaggctcggtattccataccggaggagcag
gcagagggctcttttgtcggaaacattgctcgagatttaggcttggacgtggcgaggctg
atatcaggtaaagctcgtattattacaaaaggaagccgacagtatgtggatttaaaccga
gacaaagggactcttgttattaaagagcaaatcgaccgagaagaactgtgtgggaagacg
acgccctgcagcttcagcttcgaggtcattttagagaatccaatccagctttatcgggtg
acagtggaggtaatagacattaatgataacagtccgtcgttcccaaaagatgaaatcaat
ttgaaaatagttgagaatgctgcatcggggactcgcttctctctagagggtgcagacgat
cctgatgttggaattaatgacattcaaaaatacacacttaagcctttagataatttcaaa
ttggaagtacagagccagcctgatggaggcagatttatcgaaatggttttacaaaccccg
ttagaccgagagaaggaggagacgcacacactggtgttgattgcttcagatggtggtgag
ccacacagatcagggacagtgcgtattcatattactgtgctagatgcgaacgataatgcg
ccagtgtgcagccagcctgtttataaagcagatgtgaaggagaattctcctgaaggaacg
gtggtgaccactgttagtgcaaatgatgcagataaggggcactatggtgaggtaatgtat
tccatagctcacgtcgccaaagaggcgaagcagctttttgcattaaatgtaaaaactgga
gagattaaagttacaggtaaactagactttgaaaaatctaagacttaccaacttaacgtt
caggcaagtgaccacggaggatataccgatacgtgcaaagttatcatacaagtaattgat
gagaatgacaacgtccctataatacagctcatgtctttttccaactcgatatctgaggat
tctcctccaggtacaactatagctgtagttaacgtggatgacgaagactctgatggtaac
ggtattgtcaagtgctccattaactctgacgtacctttcaaaattgagtcttcattaaca
ggttattacaccatagtaactgacaacttcttagacagagagagtgtccctgagtataat
atcacgataactgtatctgatcaaggctctccacctctgaccagcagtaaaaacatcaat
gtcaaggtgtctgacgtgaatgacaacccacccaaattcagtcaatcagaatatagtaag
accgtaccagagaacaactctcctggaatttctgtgtttgctctcagtgccagagatgcc
gactggggccaaaacgctcgagtttcttactttctggaggaaaaagagattaatggatta
gctgtgtcatcgttagtgtcagtaaattccgagaatggagtcgttcatgccgtgagatcg
cttgattatgaacagatcaagtggttcgaatttaacgtaacagctcgtgatgctggatct
cctcctctgagttcagtggctacaattcgaataatagtccaggatcagaacgacaaccct
cctcaggtcctgtatccagtccagactggtggctctgtggtggctgaaatggtgcctcgt
tcagcagatgtgggctatctggtgaccaaagtggtggctgttgatgtggactctggacag
aatgcgtggctttcgtataaactgcagaaagccacagacagggctctgtttgaagtgggc
tcccagaatggagagatccgaaccatccgccaagtgagtgataaagatgcagtgaaacag
agactgagtgttatagtggaggacaacggtcagccctctcgttcagctacagtcattgtg
aacgtggcggtggcagacagcttccctgaagttctgtcggagttcagtgactttccacac
gacaaggagtacaatgacaacctgactttttacttggtgttggctctggctgtggtctcc
ttcctgttcatcacgtgtttggtggttattatctccgtgaaaatctacagatggagacag
tctcgcatcctgtatcattccaacctgcctgtgattccatattatcctccacgttactca
gacactttggggacaacagggactctccaacacgtgtacaattacgaggtgtgcaggacg
acagactcgagaaagagtgactgtaagttcggcagagctggtagtcagaacgtgttgatc
atggatcccagttgttcagggacgatgcagcggatgcagagtgagaagagcatcctggat
gaaccagactctcctctcgaggtgaggtggaatatataa
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