Amphiprion ocellaris (clown anemonefish): 111566386
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Entry
111566386 CDS
T06018
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111566386 (smarca4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aoce03021
]
111566386 (smarca4a)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111566386 (smarca4a)
Transcription machinery [BR:
aoce03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
111566386 (smarca4a)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
111566386 (smarca4a)
Chromatin remodeling factors
BAF complex
111566386 (smarca4a)
PBAF complex
111566386 (smarca4a)
GBAF(ncBAF) complex
111566386 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
111566386
NCBI-ProteinID:
XP_023122711
Ensembl:
ENSAOCG00000019167
UniProt:
A0AAQ5XNN1
LinkDB
All DBs
Position
19:5547961..5568390
Genome browser
AA seq
1643 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPPQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYGQMKGMGMRPGGHSGMGPPPSPMDQHSQGY
PSPLGGSEHAPSPVPANGPPSGPMMPGGPSGPGSGPMEGSGDPNQGMGQPNRGGPQGPGG
PPGAGAGPGGAGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPEHLQMAVQGKRPMPGMQP
QPMPNMPPSTGPGGGPGAGPGPAQANYNRPHGMVGPNMAPPGPAGVPPGMQGQPTNGPPK
PWPEGPMVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPM
MLHQKQNRITPIQKPRGLDPVEILQEREHRLQARIAHRIQELENLPGSLAGDLRTKATIE
LKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIE
QERKRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIE
KERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAAQALKEKKKK
KKKKKPEAPEGGAPGLGPDGEPLDETSQMSDLPVKVIHVDSGKILTGVDAPKAGQLETWL
EMNPGYEVAPRSDSEDSGSDEEEEEEEEEEEHPQHSAAPTEEKKKIPDPDSEDVSEVDVR
HIIEHAKQDVDDEYGNASFNRGLQSYYAVAHAVTEKVDKQSSLLVNGQLKQYQIKGLEWL
VSLYNNNLNGILADEMGLGKTIQTIALITYLMEFKRLNGPFLIIVPLSTLSNWVYEFDKW
APSVVKVSYKGSPAARRSFVPILRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHR
MKNHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA
PFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQR
VLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGY
SGGIVSGPDLYRSSGKFELLDRILPKLRATDHKVLLFCQMTSLMTIMEDYFAYRNFKYLR
LDGTTKAEDRGMLLKTFNDPASEYFVFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQ
AQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGFERRA
FLQAILEHEEQDEVGARGGCRTRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRR
EEARNPKRKPRLMEEDDLPGWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTE
KQWLKAIEEGNLEDIEEEVRHKKTTRKRKRDRDHDGGPATPSSSSGRGRDKDEEVKKAKK
RGRPPAEKLSPNPPSLTKKMKKIVDAVIKYKDGNGRQLSEVFIQLPSRKELPEYYELIRK
PVDFRKIKERIRSHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQK
IEKDDESEGEESEEEEEEVDEGSESESRSVKVKIKLSRKEKGERGGKGQRRRGRGARAKP
VVSDDDSEEEQEEERSASGSEED
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgatcccccgatgggagggacacctcggcccggtccctccccaggccca
gggccatctccaggaggtatgatgggaccaagtccgggtccctcgccgggctcggcccac
agcatgatgggtccaagtccaggacctccaggatcgggacacccccacccaccacaggga
ccctcaggatatcctcaggacaacatgcaccagatgcacaaacccatggaagccatgcac
gagaagggaatgcctgatgaccctcgctatggccagatgaagggtatgggcatgagaccg
ggaggacacagtgggatgggaccacctccaagcccaatggaccaacattcccaaggttac
ccctctccattgggaggttcagaacatgcacccagcccagttcccgccaacggccctcca
tctggtcccatgatgcccggaggtccttctggccctgggtcgggccctatggagggcagt
ggggaccctaaccaaggtatgggtcagcccaaccgtggtggtccacagggcccgggtgga
ccccctggtgcaggagccggacccggcggcgcaggtggacccactccttttaaccagaac
cagctgcaccaactcagggcccagattatggcctacaagatgctggcacgcagtcagccc
ctaccagagcacctgcaaatggctgtgcaggggaagaggcccatgccagggatgcagccg
cagccgatgcctaatatgccaccctctacagggcctggaggtgggccgggtgctgggcca
ggacctgctcaggccaactacaatagaccacacggtatggtaggtcccaatatggcgcct
cctggaccagcaggtgttcccccaggtatgcaaggccagcctaccaatggaccccctaag
ccatggcctgaaggaccaatggtgaatgctgctgccccttccaaccctcctcagaaactg
attccacctcagcctactggcagaccctctcctgctcccccctccgtgcctcccgctgcc
tccccagtaatgccccctcagacacagtccccggggcaacctgcacagccccctcccatg
atgctacaccagaaacaaaaccgcatcacccccatccagaaaccccgcgggctggaccca
gtggagatcctccaggagagagagcacaggctacaggctcgtattgctcaccgtatacag
gagctggagaacctgcctggctccctagctggtgacctgcgcaccaaagccaccatcgag
ctcaaagccctgaggctgcttaacttccagagacagctgcgtcaggaggtggtggtctgc
atgcgtcgtgatactgctttggaaactgccctcaacgctaaagcctacaagcgcagcaaa
cgccagtctttacgtgaagctcgtatcactgagaagctcgagaagcagcagaagatcgaa
caagagcgtaaacgccgccagaaacaccaggaatacctcaatagcatcctgcagcacgcc
aaggactttaaggagtaccaccgctcgatcacagcgaagatccagaaggccaccaaagct
gtcgccacttatcatgccaacaccgagcgcgagcagaagaaagagaatgagcgcattgaa
aaggagagaatgcggaggctgatggctgaagatgaagaagggtaccgtaaacttattgac
cagaagaaagacaagcgtctggcctacctgctacagcagacagacgagtacgtggccaac
ctcactgagttggtgcgtgctcacaaagccgctcaagccctcaaagagaagaagaagaag
aagaaaaagaagaagcccgaggctccagagggtggtgctcctggtcttggacctgatgga
gagcctctagatgagacaagtcaaatgagtgacctaccagttaaggtcatccatgtggac
agcggaaagatcctgacgggcgttgatgcaccgaaggctggccagctggagacctggctt
gaaatgaatccaggatacgaagtggcaccacgctcagacagtgaagatagtggttcagat
gaagaggaggaggaggaggaggaggaagaggagcaccctcagcactctgcagccccgaca
gaggagaagaagaagattcctgaccctgacagtgaagacgtgtcagaagtggatgtccgg
cacatcattgaacacgccaagcaggatgtagacgacgagtacggcaatgcaagcttcaac
cgaggcctgcagtcctactacgctgtggctcacgcggtcactgagaaagtggataaacag
tcctcactgctggtcaatgggcagctcaagcaataccagatcaaaggtctggaatggctg
gtgtcactttacaacaacaacttgaacggcatcttggctgatgagatgggtctgggaaaa
acaatccagaccatcgcccttattacttacctcatggagttcaagcgcctcaacgggccc
ttcctcatcattgtacctctctcaactttatcaaactgggtgtacgagtttgataagtgg
gcgccatcagtcgtgaaggtctcctacaaggggtctccagctgctcgccgttcattcgtt
ccaatcttgcgtagcggcaagttcaacgtgctgcttaccacgtacgagtacattattaaa
gacaagcaagtgctagcaaagctccgctggaagtacatgatcgtggacgaaggtcatcgt
atgaagaaccatcactgtaagctcactcaggtcttgaacacacactacttggccccacgg
cgtttgctgctcacaggaactccgctgcagaacaagctgcctgagctctgggccctgctc
aacttcctgctgcccaccattttcaagagctgcagcaccttcgaacagtggttcaacgct
cccttcgccatgactggagagaaggttgacctgaacgaagaagagaccatcctgatcatt
cgacgtttacacaaagtgctccgacctttcttgctgcgccgactcaagaaagaagtcgag
gcccagctgccagagaaggtggagtacgtgatcaagtgcgacatgtctgctctccagagg
gttttgtacagacacatgcaggccaagggagtcttactcacagatgggtcagaaaaagac
aagaagggtaaaggtggcacgaagaccctgatgaacactatcatgcagttgaggaagatt
tgcaaccacccctacatgttccagcacattgaggagtctttctctgagcatcttggatat
tctggtggaatcgtgtccggccctgacctgtaccgctcctctggaaagtttgagctgctg
gatcgtatcctgcccaagctgagggccaccgaccacaaagtgctgctcttctgtcagatg
acctccctcatgaccatcatggaggactacttcgcttaccgcaacttcaagtacctgcgt
ctggatggaaccaccaaagcagaggatcgtggcatgctgctgaagacattcaatgaccca
gcctctgagtactttgtgttcctgctcagtaccagggctggaggtctgggcctgaacctg
cagtctgctgacactgtcatcatttttgacagtgactggaatcctcatcaggacttgcag
gcccaggacagagcccaccgtatcggtcagcaaaacgaggtgcgcgtgctccgcctgtgc
accgtcaacagcgtggaggaaaagatcctggcagcggccaagtacaagctgaacgtggac
cagaaggtcatccaggccggcatgttcgaccagaagtcctcaggctttgagcgccgggcc
ttcttacaggccattctggagcacgaggagcaggacgaggtcggggctcgaggaggctgc
cgcactaggggggcgtgggaggaagacgaagtgcccgatgatgagactgtcaatcagatg
attgccagaagtgaagaggagtttgaacagtttatgcgcatggatctagacagacgccgc
gaggaagcccgcaaccctaagaggaaacctcgcctcatggaggaggacgatctgccaggc
tggatcttaaaagacgacgccgaggttgagaggttaacctgcgaagaggaggaggagaag
atgtttggccgaggatcccgccagcgcaaggaggtggactacagcgactctctcacggag
aaacagtggctgaaggccatagaagaaggaaatctagaggacatcgaagaggaagtacgc
cacaaaaagaccaccagaaagcgcaagagagaccgtgaccacgacggcggcccggccacg
ccaagctccagcagcggccgcggtcgagacaaggacgaggaggtaaagaaagccaagaag
cgtggtcgccctcctgcagagaagctctcccccaaccctccgtctctcaccaagaagatg
aagaagatcgtcgacgctgtcatcaaatataaggatggtaatggccgacagctgagtgag
gtcttcatccagctcccctctcgcaaagagctgccagagtactacgagctcatccgcaaa
ccagtggacttcaggaagatcaaggagaggatccgcagccacaagtatcgcagcctcaac
gacctggagaaggacgtgatgctgctgtgtcagaatgcccagacttttaacctggaggga
tctctgatctacgaggattccattgtgctccagtccgtcttcaccagcgtgaggcagaag
atcgagaaggacgacgaaagcgagggagaggagagcgaggaagaggaggaggaggtcgat
gaaggttcagagtctgaatctcgttcagtgaaggtgaagattaaactgagccggaaagag
aagggagagcgaggaggcaaaggacagcgacgaaggggccgcggcgcccgagctaaaccc
gtggtgagcgacgacgacagcgaggaggaacaggaagaggagcgttcggccagtggcagc
gaggaggactga
DBGET
integrated database retrieval system
