Amphiprion ocellaris (clown anemonefish): 111566572
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Entry
111566572 CDS
T06018
Symbol
zgc:113307
Name
(RefSeq) lumican isoform X1
KO
K08121
fibromodulin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111566572 (zgc:113307)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aoce00535
]
111566572 (zgc:113307)
Proteoglycans [BR:
aoce00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
111566572 (zgc:113307)
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
111566572
NCBI-ProteinID:
XP_023123011
Ensembl:
ENSAOCG00000010353
UniProt:
A0A3Q1AYX3
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Position
5:complement(23834535..23841889)
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AA seq
382 aa
AA seq
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MYQTAGKHRWISPSFSMALLCCGLLMLLCCFGSGSATVGEDVDYGGIPLWINRLLGEPSV
LSLQGRMDPAWFRANNPLACPQQCDCPIQWPTALYCDHRSLADIPDQLPDRTQYLFLQGN
NISSLPSSVLTNITGLRWLILDNNKLQSDKLELASLQNQSQLCYFFANHNHLTSVPSALP
AGLKQLRLAHNQISSINPKAFQKLQNLTLLLLQGNRLQTIKEGDLKGLLRLNLLDLSGNL
FSTVPKHLPPSIQQLYLSNNSLSALDDDSFVGFLNLKYLRLSHCGLQNLGIHPQVFNSSS
LVELDLSYNKLTTIPTVPTTLQNLYLEANQIQEFNVTSFCREVGPLSYSRMKILRLDGNK
LSYHLLPPDWVFCLRVLRSIYI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgtatcagacagcaggcaaacatcgctggatctcaccatctttctccatggctctcctg
tgctgtggcctgttgatgctgctgtgttgttttggttctggctcggccaccgttggtgaa
gacgtggactatggaggcattcctctgtggattaaccgcctgctgggtgagcccagtgtt
ctgagtctgcagggacggatggatccggcctggttccgagccaacaatcccctggcctgc
cctcaacagtgtgactgtcccatccagtggcccacagctctgtactgcgaccacagaagt
ctggcagacatccctgaccaactgccagacagaactcaatacctgtttcttcagggtaac
aacatctcctccctgccctcctctgtcctgaccaacatcactggtctccgctggctcatc
ctggacaacaacaagctgcagagcgacaagctggagctggcctccctgcagaaccagagc
cagctgtgctatttttttgccaaccacaaccacctgacatcagtgcccagtgctctgcca
gctggactcaaacagttgcgactggctcacaaccaaatcagcagcatcaacccaaaagct
ttccagaaactgcaaaacctgacgctgctgctgctgcagggaaacagactgcaaaccatc
aaagagggagacctcaaaggcctgcttaggctgaacctgttggacctcagtggaaatttg
ttctcaaccgtccccaaacatttacctccctccatccagcagctctatctgtctaacaac
tctctgtctgcgctggatgacgacagttttgtgggattcctcaacctaaagtaccttcgt
ctgagtcactgtggcctgcagaacctcggcatccacccgcaggtctttaactcctccagc
ttggtggagctggacttgtcttataacaaacttactaccattcccacagttcccaccacc
ctgcagaacctctacctggaggccaatcagatacaagagttcaacgtgaccagtttctgc
agagaggtgggacctttgtcctactccaggatgaaaatcctccgattggatggaaacaaa
ttgtcctaccatctgctgcctcccgactgggtgttctgcctgcgagtccttcgaagtatt
tacatctga
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