Amphiprion ocellaris (clown anemonefish): 111566934
Help
Entry
111566934 CDS
T06018
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04144
Endocytosis
aoce04530
Tight junction
aoce04810
Regulation of actin cytoskeleton
aoce05100
Bacterial invasion of epithelial cells
aoce05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
111566934 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
111566934 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
111566934 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111566934 (arpc1a)
05100 Bacterial invasion of epithelial cells
111566934 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111566934 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
aoce04812
]
111566934 (arpc1a)
Membrane trafficking [BR:
aoce04131
]
Others
Actin-binding proteins
Arp2/3 complex
111566934 (arpc1a)
Cytoskeleton proteins [BR:
aoce04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
111566934 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
EIF3I
RMC1_N
Rax2
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_SPT8
SH3_3
Motif
Other DBs
NCBI-GeneID:
111566934
NCBI-ProteinID:
XP_023123511
Ensembl:
ENSAOCG00000001081
UniProt:
A0A3Q1D7T0
LinkDB
All DBs
Position
4:complement(2196394..2208537)
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKTHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKEDVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGAVLAEFGGAGGGGWVHSVSFSASGNRLAWVSHDSTVTVVDSSKTASPS
QLKTEFLPLLSVIFVSENSLVAAGHDCCPMLFRCDDGGMLTFVSKLDLPKQSIQRNISAM
ERFRNMDKRATTEDRNTALDTLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKSL
EASIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcatcaatttcttttggaacccatcacctgccacgcgtggaaccgcgacagg
acacaaattgccatcagtcctaataaccatgaagttcatatctacaagaagagtggtaac
cagtgggttaagacccatgagctgaaggagcacaatggacacataacaggtattgactgg
gctcccaaaagtgaccgtatagtgacatgtggagcagaccgtaatgcttatgtgtggtcc
cagaaggaagacgtatggaagcccactctggtcattctcaggatcaaccgagcagccacc
ttcgtcaagtggtctccactggagaacaagtttgcagtcggcagtggtgctcgactcatc
tctgtctgctactttgagtctgaaaatgactggtgggtgagcaagcacatcaagaagccg
atccgctccaccatcctgagtctggactggcatcccaacaatgtcctgctggctgctgga
tcctgtgacttcaagtgcagggtgttctcagcctacattaaggaggttgaagagaaacca
ggccccacaccctggggcagcaagatgccgtttggggctgtgttagcggaatttggagga
gcaggtggagggggttgggtgcattctgtctctttttcggcttctggtaaccgtttggcc
tgggtcagccatgacagcactgtcactgtcgtggacagctccaagactgccagtccttca
cagctgaagacggagttccttcctctcctcagtgtcatttttgtctcagagaacagtcta
gtagctgcgggccacgactgttgccccatgctgttccgttgtgacgatggtggaatgctg
acatttgtgtcaaagcttgacctccccaagcagagtatccagaggaacatctctgccatg
gagcgcttcaggaacatggacaagagagccaccactgaagaccgcaacactgccctggac
acactgcaccagaacagcatcacccaagtgtctatctatgagggagacaaaagggattgt
cgcaagttctgcaccacaggcatcgatggagcgatgactatttgggacttcaagagtcta
gaagcttctatccagggtctccgcatcatgtga
DBGET
integrated database retrieval system
