Amphiprion ocellaris (clown anemonefish): 111567212
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Entry
111567212 CDS
T06018
Symbol
htt
Name
(RefSeq) huntingtin isoform X6
KO
K04533
huntingtin
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111567212 (htt)
04131 Membrane trafficking [BR:
aoce04131
]
111567212 (htt)
03029 Mitochondrial biogenesis [BR:
aoce03029
]
111567212 (htt)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111567212 (htt)
Membrane trafficking [BR:
aoce04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
111567212 (htt)
Mitochondrial biogenesis [BR:
aoce03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
111567212 (htt)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
HEAT_2
HEAT_ECM29
UTP20
Motif
Other DBs
NCBI-GeneID:
111567212
NCBI-ProteinID:
XP_023123956
Ensembl:
ENSAOCG00000004458
LinkDB
All DBs
Position
4:30447014..30481090
Genome browser
AA seq
3195 aa
AA seq
DB search
MATMEKLMKAFESLKSFQQQQGPPTAEELVQRQKKEQATTKKDRVTHCLTICENIVAQSL
RTSPEFQKLLGIAMEMFLLCSDDSESDVRMVADECLNKIIKALMDSNLPRLQLELYKEIK
KNGASRSLRAALWRFAELAHLIRPQKCRPYLVNLLPCLTRITKRQEEMVQETLAAAMPKI
MSALGHFANDSEIKVLLKSFVANLKSSSPTIRRTAASSAVSVCQHSRRTSYFYTWLLNVL
LGLLVPVDEEHPSHLILGVLLTLRYLMPLLQQQVNTTSLKGSFGVMRKEADVQPTPEQLL
QVYELTLHYTQHWDHNVVTAALELLQQVFRTPPPELLHMLITPGSILHASVFRQDTENRA
RSGSILELIAGGGSSCSPLLLRKQRGKMLSGEEDALEDDPERTEVTTGAFTASVVGADGS
SAAQVDIITEQPRSSQHTLQPGDSVDLSASSEQGGGGGGTSASGTPESPNDNEEEMLSQS
SSGGANVTPETADYTTPENATPEGGPLGEGGPLLGTNDRSLPPSDSSQTTTEGPDSAVTP
SDVAELVLDGSESQYSGMQIGTLQDEEDEGTASSSQEEPTEPFLQSALALSKPHLFEGRG
HNRQGSDSSVDRFIPKDEPAEPEPDNKPSRIKGPIGHYTDQGVEPLVHCVRLLAASFLLT
GQKNGLIPDKEVRVSVKALAVSCVGAAAALHPEAFFNSLYLEPLDGIPVEEQQYISDVLG
LIDHGDPQIRGATAILCGAIIQAALTKTRYNIHTWLASVNSATGNPLSLVDLVPLLQKAL
KDESSVTCKLACSAVRHCIMTVCSSTLSELGLQLVIDLFALRDSSYWLVRTELLETLAEL
DFRLVNFLERKTEALHKGGHHYTGRLRLQERVLNDVVIRLLGDDDPRVRHVAASAVSRLV
PRLFYDCDQGQVDPVVAIARDQSSVYLQLLMHETQPPSQFTVSTITRTYRGYSLSNAVSD
VTLENNLSRVVTAVSHAFTSSTSRALTFGCCEALCLLASNFPVGTWSTGWHCGYISSSSH
FSSRSSLNRSRGRALSLSQPSSAAASSTTSSAPDTERRTLTVGMANMVLSLLSSAWFPLD
LSAHQDALLLSGNLLAAVAPKCMRNPWAGEEEGSSGNTSGGPNKMEEPWAALSERSLVAM
LEQLFSHLLKVLNICAHVLDDTPPGPAVKAALPSLSNTPSLSPIRRKGKEKEAAEPSAAP
MSPKKSNEVNTGRPADSAGSTAVNKSTTLGSFYHLPPYLKLYDVLKATHANYRVTLDLHS
SQEKFGSFLRATLDVLSQLLELATLHDIGKCVEEILGYLKSCFSREPTMATVCVQQLLKT
LFGTNLASQYEGVLSGPSRSQGKALRLGSSSLRPGLYHYCFMAPYTHFTQALADASLRNM
VQAEQEQDTSGWFDVMQKASNQLRSNIANATRSRGDKNAIHNHIRLFEPLVIKALKQYTT
STSVALQRQVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRDSEAIIPNIF
FFLVLLSYERYHSKQIISIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGSNKA
DAGKELDTQKEVVVSMLLRLVQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMI
AKQQMHLDSPEALGVLNTLFETVAPSSLRPVDMLLKSMFTIPVTMASVATVQLWVSGILA
VLRVLVSQSTEDIVLSRVHELSLSPHLLSCHTIRRLHQQSLSPNGQPAADTLANQEANGE
SQKAPPEETFARFLLQLVGVLLDDISTRQVKVDITEQQHTFYCQQLGTLLMCLIHVFKSG
MFRRITAAASRLLKGESAGGQTGADASLFYPLEGLNSMVQCLITTHPSLVLLWCQVLLII
NYTNYSWWAEVHQTPKRHSLSCTKLLSPHSSGEGEEDKPESQLAMVNREIVRRGALILFC
DYVCQNLHDSEHLTWLIVNHVRDLINLSHEPPVQDFISAVHRNSAASGLFIQAIQSRCDN
LTTPTMLKKTLQCLEGIHLSQSGSLLMLYVDKLLSTPFRVLARMVDTLACRRVEMLLAET
LQNSIAQLPLEELDRIQEYLQSSGLAQRHQRFYSLLDRFRATVADTNSPTPPVTSHPLDG
DPPPAPELVIADKEWYVALVKSQCCLRGDVSLLETTELLTKLPPADIFNIMSCKEFNLSL
LCPCLSMGVQRLARGQGSLLLETALQVTLEQLAGVTGSLPAPHQSFLPPPQPQPYWDQLG
DVYDQSGFYPRVLSLCRALSQYLLTVNQLPSSLHIPSDKEHLITTFTCTATEVVVWRLLQ
NQLPLSVDLQWALSCLCLALQQPCVWNKLSKPEYSTHTCSLIYCLRLIIVAVAVSPGDQL
LHPERKKTKEERDAEGDQVDSHAAHMCEWQACEIMAELVEGLQSVLSLGHHRNCAFPAFL
TPTLRNIVISLSRLPLVNSYTRVPPLVWKLGWSPQPGGEFGTTLPEIPVDFLQEKDVFRE
FLYRINTLGWSSRTQFEETWATLLGVLVTQPITMDQEEETQQEEDLERTQLNVLAVQAIT
SLVLSAMTLPTAGNPAVSCLEQQPRNKSLKALETRFGRKLAVIRGEVEREIQALVSKRDN
VHTHHPYHAWDPVPSLSAASTAGTLISHEKLLLQINTEREMGNMDYKLGQVSIHSVWLGN
NITPLREEEWGEDEEDEADTPAPTSPPISPINSRKHRAGVDIHSCSQFLLELYSQWLIPG
SPSNRRTPTILISEVVRSLLAVSDLFTERNQFDMMFSTLMELQKLHPPEDEILNQYLVPA
ICKAAAVLGMDKVIAEPVCRLLEMTLRSTHLPSRMGALHGVLYVLECDLLDDTAKQLIPT
VSEYLLSNLRAIAHCVNLHNQQHVLVMCAVAFYMMENYPLDVGAEFMAGVIQLCGVMVSA
SEDSTPSVIYHCVLRGLERLLLSEQLSRVDGEALVKLSVDRVNMPSPHRAMAALGLMLTC
MYTAVLASGSDVTGVRGQVDSGSAVAEAVGVTAGHVGFSSGKEKASPASRPAHSDPQAPD
SESIIVAMERVSVLFDRIRKGLPSEARVVSRILPQFLDDFFPPQDVMNKVIGEFLSNQQP
YPQFMATVVYKVFQTLHATGQSSMVRDWVLLSLSNFTQRTPVAMAMWSLSCFFVSASTSQ
WISALLPHVISRMGSSEVVDVNLFCLVAMDFYRHQIDEELDRRAFQSVFETVASPDSPYY
QLLGCLQSIHQDTSL
NT seq
9588 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatggagaaactgatgaaggcctttgagtctttgaagtcattccaacaacag
caggggcctccgaccgctgaggagcttgtccaaagacaaaaaaaggagcaagctaccaca
aagaaggacagggtgactcactgtctgacaatatgcgaaaacattgttgctcagtctctg
cgaacatctccagagtttcagaaactgctcggcatcgccatggagatgttcctgctctgc
agtgatgacagcgaatcagatgtccggatggtagccgatgagtgcctgaacaaaattatc
aaagcgttgatggactccaacttgcctagactccagctggagctgtacaaagaaattaaa
aagaatggtgcctctcggagtctgagggcagctttgtggaggtttgctgagcttgcccac
ctcatcagaccacagaaatgcagaccctacctggtcaacctgttgccgtgcctcaccaga
atcaccaagcggcaggaggagatggtacaggagacactggctgcagcaatgcccaaaatc
atgtcagctttgggccattttgctaatgatagtgagattaaggtgctgctgaagtctttt
gtggccaatctgaagtccagctctcccactatcagacggacagcagccagctcagctgtc
agtgtgtgccaacactccagacgcaccagctacttctacacctggcttcttaatgtgttg
ctgggtctgctggttccagtggatgaggaacacccgagccatcttattctaggggtgctg
ttaacacttcgctatctgatgcctctgctgcagcagcaagtcaacaccaccagcctcaaa
ggaagctttggagtcatgagaaaagaggctgatgtacagccaacacctgaacagctgcta
caggtgtacgagctgaccctacactacacgcagcactgggatcacaatgtggtcacagct
gctctggagctcctgcagcaggtgttcaggactcctccgccagagcttttgcacatgctc
atcactcccggcagcattctacatgccagtgtgtttcgacaggacactgaaaaccgggcg
cgttctgggagcatccttgagctcattgcagggggagggtcttcctgcagtccactcctt
ctcaggaaacagagaggtaaaatgctctctggggaggaagatgcgttggaggatgaccct
gagaggactgaggtcacgaccggcgccttcacagcatcagttgtaggtgcagatggctca
tctgcggcccaggtggacatcatcaccgagcagccacgctcctcccaacacactctgcaa
cccggtgactctgtggacctcagtgcctcctcagaacagggcggcggtggaggcgggaca
tctgcatcaggcaccccagagtcacccaatgacaatgaggaggaaatgctgagtcagagc
tccagtggtggagccaacgttacaccagaaacagctgactacaccacaccggagaacgcc
actccagagggtggacccttaggagaaggagggccactcctaggcactaatgatcgctca
cttccacccagcgactcctctcagaccaccacagagggaccggactcggctgtcacccct
tcagacgtagcagaactggtcctggatggcagtgagagtcagtactctgggatgcagatc
ggaacactacaagatgaagaggatgaaggaacagcatcttcctcccaagaagaacccaca
gaacccttcctgcagtcagcactggctctgagcaaaccccacctctttgaaggcagaggt
cacaaccggcagggctcagacagcagcgtggaccgcttcataccaaaggacgaacccgct
gaacctgaacctgataataagccatcacgaataaagggtccaattggacactatactgac
caaggggtggaaccactagtgcactgtgtacgacttcttgctgcttccttcttgctgaca
ggccaaaaaaatggtttgattcctgacaaagaggtgcgagtaagtgtgaaggccttggca
gtcagctgtgttggagcagcagcggcactgcatcccgaagccttttttaattccctctat
ctggagccgctggacggtattccagtagaagagcagcagtatatcagtgatgttctgggc
ctcatagaccatggggacccccagatcagaggggccacagccatcctctgtggagccatc
atacaggccgctctcaccaaaacacgctacaacatacacacttggctggccagtgtgaat
agtgcaacaggtaatccactgtccctggtggacttggtgcctttgctccaaaaagctctg
aaagacgaatcctctgtcacctgcaagttggcttgttctgcagtgaggcactgcatcatg
acggtgtgcagcagtacactgagtgagctcggcctgcagttggtaatagatctgtttgct
ctgagggactcctcttattggctcgttcgcactgagctcttggaaactctggctgaattg
gatttccgattagttaatttcttggagaggaaaactgaggctttacacaaaggaggtcac
cactacactgggcgtctgcgactgcaagaaagggtcctgaatgatgtggtaatacgtctg
ttgggagatgatgatccaagagtacggcatgtggctgcttcggctgtcagcagactggtt
cccaggttgttctatgactgtgatcaaggccaggtggatccagtggtggcgatagctcgg
gaccagagttcagtctacctgcagctgcttatgcatgagacacaacccccctcccagttc
acagttagcacaatcacaagaacataccgaggctacagtctgtccaacgctgtgtcggac
gtcacattggagaacaacttgtccagagttgttactgctgtctcccacgctttcacctca
tctacctccagagccctgacttttggctgctgtgaggccttgtgccttctggcttcaaat
tttccagtgggcacttggagcacaggctggcactgtggctatattagctccagcagccac
ttttcttcccgttccagtctgaaccgcagcaggggcagagctcttagtttgtcacagccc
agcagtgctgcagcctcttcgaccacctcatctgcacctgacactgagcggaggactctg
acagtaggaatggccaacatggtgctctctttactctcttctgcctggtttccactggat
ctctcagcacatcaagacgcactcttgctttctggcaacctgcttgctgctgtagctcct
aaatgcatgcgcaacccttgggctggagaggaggaaggcagtagcggaaacaccagtgga
ggtccaaataagatggaagagccttgggcggcgctgtcggagcgctccctggtggcaatg
ttggagcaactcttctcccacctgctaaaggttctcaacatctgcgcccatgtgttggat
gacacaccaccaggaccagcagttaaggctgctcttccctcactgagcaacaccccctcc
ctcagtcccatccgtagaaaaggcaaggagaaggaggctgctgagcccagtgctgcccca
atgagcccaaagaaaagcaatgaggtcaacacaggcagaccagcagacagcgcagggtcc
acagcagtaaacaaatccaccaccctgggcagcttctaccatctgcccccctacctcaag
ctctatgatgtgctcaaagctacacatgccaactacagggtgacgttggacctccacagc
agccaggagaagtttggaagtttcctgcgtgccaccttagatgttctgtctcagctgctt
gagctggctacactacatgacattggcaagtgtgtggaggaaatcttgggatacctcaag
tcctgcttctccagagaaccaaccatggctactgtttgtgtgcaacagttgttgaagacc
ctgtttgggaccaacctggcctcccagtatgagggtgtcctgagtggacccagccgttcc
caaggcaaggctctccgtctcggctcttctagcctccgaccaggcctctaccactactgc
ttcatggctccttacacacacttcacccaggctctggctgatgctagtcttcgtaatatg
gtgcaggctgagcaggaacaggacacctctggatggtttgatgtgatgcaaaaagcatcc
aatcagctgaggtccaacattgcaaatgcaacacgtagcagaggagataagaatgccatc
cacaaccacattcggctgtttgaaccgctggtgatcaaagctttgaagcagtacaccacc
agcacctctgtggccctgcagagacaagtgctggaccttctcgcccaacttgtgcaactc
agagtcaactactgcctactcgactcagatcaggtcttcataggctttgttctaaagcag
tttgagtatattgaagtgggacagttccgagattctgaggccatcattcccaacatcttt
ttcttcctggtgctgctgtcttacgagcgctaccattccaaacagattatcagcatcccc
aaaattatccaactctgtgatggcatcatggccagtggcaggaaggctgtcacacacgct
attccagccttgcagccaatagttcatgacctgtttgtcttgaggggctcaaacaaagca
gatgcaggcaaagaactggatacacagaaagaagtggtggtttctatgctgctcaggctc
gtacagtaccatcaggtgttggagatgttcatccttgtactgcagcagtgtcacaaagag
aatgaagacaagtggaagagattgtccagacagattgctgatgttatacttcccatgatt
gccaagcaacagatgcatctggactctccagaggcactgggagtgttaaacacactgttt
gagactgtggcgccttcctctctcagacctgtagacatgctgctcaagagtatgttcacc
attccagtgaccatggcgtctgtagctacagtccagctgtgggtttctggtatcctggca
gtgctcagggtactagtctcccagtccactgaagacattgtcctgtcccgggtccatgag
ctctcactctccccacatctcctctcctgccacacaatccgccgcctgcatcagcagagc
ctctcccccaatggccagcctgctgctgacacactcgctaaccaagaggctaatggtgaa
tcacaaaaggctccacctgaggaaacctttgctcggttcctccttcagctggtaggcgtg
ttgctggatgacatttccaccaggcaggttaaagtggacattactgagcagcaacacact
ttctactgccaacagctgggcacactgctcatgtgtctcatacatgtcttcaaaagtgga
atgtttcgcaggatcacagctgcagctagccgtctcctaaagggcgagagtgctggtgga
cagacgggcgctgacgccagtctcttctaccccttagagggtctgaacagcatggtgcag
tgcctcatcaccactcacccatccctggtgctcctctggtgccaggtcctcctcatcatc
aactacaccaactactcctggtgggctgaggttcatcagacacccaaaagacacagcctt
tcatgcacaaagctgctaagcccacactcctcaggggaaggtgaagaggacaagcctgag
tcccagttagccatggtcaacagagagattgttcgcagaggagccctaatcctcttctgt
gactatgtgtgtcagaacctccatgactcagagcatctgacctggctgattgttaaccac
gtgcgtgacctcatcaacctttcccatgagcctccagtgcaggacttcatcagcgctgtc
caccgcaactcagctgccagtggcctctttatccaggccattcagtcccgctgcgacaac
ctcactactccaaccatgttgaaaaagactttgcagtgtttggaaggtatccacctcagt
cagtctggttctctcctgatgctttatgtggacaagctgctcagtacacccttcagggtt
ttggctcgcatggtggacacactggcatgtcgcagggtagagatgttgctggctgagaca
ctacagaatagtatagcccagctacctctggaggaactggacaggatccaagaatacctc
cagtccagtggcttggctcagaggcatcagaggttctactccctgctggacaggttcaga
gctactgttgctgacactaacagccccacccccccggtgacatcacaccccctagatgga
gatccaccccctgcccctgaactggtcattgcagataaggagtggtatgtggctctggtg
aagtctcaatgctgtcttcgtggagatgtttccctgttagagacaacagaacttcttacc
aaactacctcccgctgatatcttcaacatcatgagctgcaaggagttcaaccttagcctg
ttgtgtccatgcctgagtatgggagtgcagcggttagcacggggtcaggggtcacttttg
ttggagacagctttgcaagtgaccctcgagcaactagcaggggtcactgggtcacttcct
gccccacaccagtccttcctgccaccgccccaaccccaaccctactgggaccaactgggt
gacgtttatgatcagtcaggtttctaccccagggttttgtcactctgcagagcactgtct
cagtatctgctgactgtgaaccagctgccttcttcattacatattccctctgacaaagag
cacctcattaccactttcacctgcactgccactgaggttgtagtgtggcgtctgctccag
aaccaattgcccctgagtgtggacctgcagtgggctctgtcctgcctgtgtctggccctg
cagcagccctgcgtctggaacaaactctccaaaccagagtactccacacacacatgctca
ctcatctactgcctacgcctcattattgttgcagtggctgtaagccctggtgaccagctg
ctgcatccagaaagaaaaaagacaaaagaagagagagatgctgaaggagaccaagttgat
tcacatgctgcccacatgtgcgagtggcaggcatgtgagatcatggcagagctggtggaa
ggcctgcagagcgtcctttctctgggtcaccatagaaactgtgcgttccccgcttttctc
acaccaacattgcgcaacattgtcatcagtctatcccggctgcctctggtcaatagttac
acccgagtacctccactggtttggaaactgggctggtcccctcagccaggaggagagttc
ggcacaacgctgccagagatccctgtggacttcttgcaggaaaaggacgtcttcagagag
tttctctaccgcatcaacacactgggctggagcagcaggactcagtttgaggagacatgg
gccactttgctgggggtgctggtcacccaacccatcactatggaccaggaagaggagacg
cagcaggaggaggacttggagcgtacccagttgaatgtgctagcagtgcaggccatcacc
agcctggtgctgagtgccatgaccctgcccaccgctggcaaccctgcagtcagctgtctg
gaacagcagcctcgcaacaagagcctcaaagccctagaaacacggtttggaaggaaactt
gcagtgattaggggtgaggtggagagagagattcaggctcttgtgtcaaagagagacaat
gtccatacacaccacccttaccacgcctgggaccctgtgccctcactgtcagcagcctcc
acagcaggtacactgatcagccatgagaaactgctgcttcagattaacacagagagagaa
atgggcaacatggattacaaactggggcaggtctccatccattcagtgtggttgggcaac
aacatcactcctctgagggaggaagaatggggtgaggatgaagaagatgaggcagacact
ccagcacccacctctccaccaatatcgcctataaactctaggaagcaccgtgcaggggtg
gatattcattcatgctctcagtttctcctggagctctacagccagtggctgatccctggc
tctcccagtaacagaaggaccccaaccatcctcatcagtgaagtggtccgatcgctgctg
gcggtgtcggacctgttcacagagaggaaccagtttgacatgatgttctccaccctgatg
gaactgcagaagctccacccaccagaggatgaaatactgaatcaatacctggtacctgcc
atctgcaaggctgctgctgttttgggcatggacaaagtaatcgcagagcctgtgtgccgc
ctgttggagatgaccctgcgcagcacccacctgcccagccgtatgggggccctgcatggg
gtgctttatgtgttggagtgtgacctgctggacgatacagccaaacagctcatccccacc
gtctctgaataccttctatccaacctcagggctatcgctcactgtgtgaacctgcataac
cagcagcatgtgttggtgatgtgtgcagtggccttttacatgatggagaactaccctctg
gatgtaggggctgagtttatggctggagttatacagttatgtggtgtgatggtgtcggcc
agtgaggactccactccctctgtcatctatcactgcgtgctccgtggtctggagcgcctc
ctgctgtctgagcagctgtcacgtgtagacggggaagcgctggtcaaactcagcgtggac
cgagtcaacatgccgtcaccgcatagagccatggctgccctgggtctcatgcttacctgc
atgtacaccgcggtgcttgcgtcgggttcagacgtgacaggggttagaggtcaggttgac
tctggctctgctgttgcggaggcggtgggcgtcacggcgggtcatgttggtttctcctca
ggcaaggagaaagccagccctgccagccgccctgcccactctgaccctcaggccccagac
agcgagtcaatcattgttgccatggagagggtctctgtgctcttcgacaggattaggaag
ggtttacccagcgaggcccgggtggtgtccaggattctgccccagttcctggatgacttc
ttcccgccacaggacgtcatgaacaaggtcatcggagagttcctgtccaatcagcaacct
tatcctcaattcatggccaccgtcgtgtataaggttttccagacgctccatgctacaggc
cagtcttccatggtgcgagactgggtgctgctgtctttgtccaacttcactcagaggaca
ccagtggccatggccatgtggagcctctcctgcttctttgtctctgcttccacctcccag
tggatctcagccctactgccacatgtgatcagccgaatgggatccagcgaggtggtggac
gtcaacctgttctgcctggtggccatggatttctaccggcaccaaattgacgaggagctg
gaccgcagggctttccagtccgtctttgagaccgtggcctcgccagacagcccttattac
cagctgctgggctgtctgcagtcaatccaccaggatacatcgctttga
DBGET
integrated database retrieval system
