Amphiprion ocellaris (clown anemonefish): 111567476
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Entry
111567476 CDS
T06018
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
aoce03015
mRNA surveillance pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111567476 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
111567476 (acin1b)
03015 mRNA surveillance pathway
111567476 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111567476 (acin1b)
03041 Spliceosome [BR:
aoce03041
]
111567476 (acin1b)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111567476 (acin1b)
Spliceosome [BR:
aoce03041
]
Complex C
Other components
EJC/TREX
111567476 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
HeH
Motif
Other DBs
NCBI-GeneID:
111567476
NCBI-ProteinID:
XP_023124399
Ensembl:
ENSAOCG00000018649
LinkDB
All DBs
Position
23:14990943..15014563
Genome browser
AA seq
1336 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKAALEQRNLPKSGQKNQLIKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMCQNSFIKQYLAKQQELLRQRLEREAMQEEEADESPAAPEEDEDHSEDN
DSSSYVSDKQHRTIPSQPSMATHEETGGDAMMGHSSGPTFHLQESPETPSVRMQRATFLQ
GHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPAVPRAQEKEGTAPSESGSAHSVLHLSRS
AGGSAGSKAHEDSDEGDDGDDESDDEDWGPGPGGARRGNRVPPLPQQMPPSLPPAAARSK
RKLQPPQHIPPPQVHHTPMQLRHPTPPPSPPPNLFSLPDTPKQSPPDTDDHEAEGPEAAR
RPKVVPFPPSTMQRQDSDTSSRSSSPEPPVKRRPGPLSLLVHKMESEGAFGAVETTSADG
MSGKTVCSTAGSSSESSLQKLETKRQQENREMEEERRLKEEKEQQQELEQERRKTQEQER
EKKRLEEEKEKERKQRQKEEQEKERKQLEEERKQHQKEEQEKERKQLEEERKQRQEEQEK
ERKRLEEERKQHQKEEQEKERKQLEEERKQRQKEEQEKERKRLEEEKGEEKKRQDEKKQR
EEKRLKEEQEKEGAVKQRVVVTEAQDSGSSSDSDSKSDSSSQSSQFSSSSGDKIQPARQL
KKAGQRQDAEDEKKMNQSKGAEKAHLSKREVSEPSAAAVTEVEPDSESSMAEQPASGAEP
ENSEVRLEESTTPKAFAARKISLTSSKTSPATTDGGTGEPDAGTAAGRKRRWGSSTAVTA
KKPSITITTDSLKCLIPDIKVNQEAVVELHPEELQLSGDEENLDTNQSDPDKGLKIRRTV
TQVVPGDNQENGQTNEEEEEEEVEKPEREKQRRTSRDKRKNSLSEEASETQTSVNLDGEA
NKVTPSDSLVRRSISQQKSGVSVTIDDPVRSNKQPSPPRGKVSNIIHVTNLVRPFTLGQL
KELLNQTGSVVEEGFWIDKIKSHCYVTYATSEEAVATRTALHGVKWPTSNPKVLNVDFCE
QDELDFHKGVLKPEREEEHVVQPGGPQNRLPPLMPERDRDRDRERDRERERERDRGVRDL
WAEREREMQRRERARGEREWDRDKVREFARPGEDEQRSRSRDRERRRRERAKSKERKTDK
KEKGDEPPAKLLDDLFLKTKAAPCIYWLPLTEEQAAQRLLDRTERQKERERRRKEQQEEE
DKKREEEKKERLKAREKDGGMAASGGAAGRGAEGDRERDRGRDREGNRSRDREGNRSRDR
EGNRSRDREGNRSRDREGNRSRDREGNRSRDREGDRSRDREGEKRWDSSHRPRRPSPGAG
SGRRSRSRSNPRDRRR
NT seq
4011 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatgggaaacctctacaatcgctccgagttgcggat
ttgaaagccgccctggagcaaagaaacctcccaaaaagcgggcagaaaaaccaactcatc
aagcggctcaaaggggctctgatgctggaaaacctacagaagtcatcgtcctcacacagc
gggctgcagcccaactctcagataggtgaagagatgtgccagaacagctttataaaacaa
tacctggccaagcagcaagagctccttcgccagagactggagagagaggcgatgcaagag
gaagaggcggatgaaagcccagccgcaccagaggaggatgaagaccactctgaggacaat
gacagctcttcctatgtctctgacaagcagcatcgaaccataccgtcccagccctctatg
gccacacatgaagagacaggaggagatgctatgatgggtcatagctctggtcctaccttc
cacctgcaggagtctcctgagactccaagtgtcaggatgcagcgagccacctttctccaa
ggacacaaggagccaccagcaccctctcctccccgtgcagttgcctccctgtcagtgcgt
gttctgggacagcctgaccgccagggactgccccctgctgtaccccgagcccaggagaag
gagggcacagcaccaagtgagtcaggatcagctcattcagtcctccacctcagtagatct
gctgggggttcggcaggaagtaaggcccacgaggacagcgatgaaggtgatgatggtgat
gatgagagtgacgatgaggactggggccctggtcctggcggggcacgaaggggaaacaga
gtgcctcccttgccgcagcagatgccccccagtctcccaccagcagctgcaagatccaaa
cgcaagcttcagcctccgcagcacatcccaccgccacaggtacaccacactcccatgcag
ctgcgccaccccactcctcctccctctccaccccccaacctgttctccctgcctgacact
cccaaacagagcccaccagacacagatgaccatgaggcagaaggtcctgaagctgcacgt
cgcccaaaggtggtgcctttcccaccttccaccatgcagaggcaagactctgacacaagc
tctcgctccagtagccctgaaccccctgtgaagcgcaggccaggacccctttctctgctt
gtacacaagatggagtcagagggggcttttggtgctgtggagaccacatcagctgatggc
atgtcaggaaagacggtatgttccactgccgggtcttctagtgaatcgtcactgcaaaag
ttagagacaaagaggcagcaagaaaatagagagatggaggaagagaggcgactgaaggag
gagaaagagcaacagcaggagctggaacaagagcgaaggaaaacacaagagcaggaaaga
gagaagaaacgcttggaagaagagaaggaaaaggagaggaaacagcgccagaaagaggaa
caagaaaaagagagaaaacaactggaagaggagaggaaacagcaccagaaagaggagcaa
gaaaaagagagaaaacaactggaagaggagaggaaacagcgccaggaggaacaagaaaaa
gagagaaaacgactggaagaggagaggaaacagcaccagaaagaggagcaagaaaaagag
agaaaacaactggaagaggagaggaaacagcgccagaaggaggaacaagaaaaagagaga
aaacgactggaagaggaaaaaggagaagagaagaaacgccaggatgagaagaagcaaaga
gaggagaaacggttaaaggaggagcaggaaaaagagggagctgtcaaacagagagtggtg
gtgactgaggcccaagattcaggctcctcgtcagattctgactctaaatcagactcctct
tcacagtcgtcacagttttcctcctcctcaggagataaaatccaacctgccaggcagctg
aagaaagcaggccagcgacaagatgcagaagatgagaaaaagatgaaccagagtaaaggg
gcagagaaagcacacctttccaaaagggaggtgtcggagcccagcgctgctgctgtgacg
gaggtggaaccagactcagagagctccatggctgagcagccagcctctggggctgagcca
gagaacagcgaagtccgcctggaggagagcaccactcctaaggcttttgctgctcgcaag
atatccttaaccagcagcaagacgtctccagccactacggatggaggaacaggggagcct
gatgcaggaactgcagcagggaggaagaggcgatggggctccagcacggcagtcacggct
aagaaaccatccatcacaattaccacggactccctgaagtgtttaatcccagacatcaaa
gtaaaccaggaggcagtggtggagcttcacccagaggagctgcagttgtctggagatgag
gaaaacctggacactaaccagagcgacccggacaaaggcctcaagatccgacgcactgtc
acacaggttgtcccaggtgacaaccaggaaaatggacagacaaatgaagaagaagaagaa
gaagaggttgagaaaccagagagagaaaagcaacggaggacatccagagacaaaaggaag
aacagtctttctgaggaagcctcggaaacacagacatctgtcaacctcgacggagaggca
aataaagttaccccgagcgacagtctggtgcgtcgctcgataagtcagcagaagtctggt
gtgtctgtcacgatcgacgaccccgtccgctcaaacaagcagccatcaccgcctcgtgga
aaagtttcaaacatcattcatgtaacaaacctggtacgacccttcactctgggccagctc
aaagagttactgaaccagacaggtagcgtggtggaagagggattctggatcgacaagatt
aaatctcactgctacgtcacatacgctacatcagaggaagcagtcgctaccagaactgca
ctccatggggtcaaatggcctacgagcaatcccaaagtgcttaatgtggacttctgtgag
caggatgagctggactttcacaaaggtgtcctgaagccagaaagggaggaggaacacgtc
gtccagccaggtggtcctcagaaccggctgccccctctgatgcctgagcgagaccgggac
agagaccgcgaaagagacagggagcgtgaacgggaacgggacagaggcgtgcgggatctg
tgggcagagcgagaaagagagatgcagcgccgggaaagggcgcgaggtgagcgggaatgg
gaccgggacaaggtccgggagttcgcaagaccgggagaggacgaacaacgatctagatca
agagacagagagaggaggaggagggagagagccaagagcaaggagaggaagactgataag
aaggagaagggagatgaacctccagccaaattgcttgatgacttgttcctcaaaaccaaa
gcagctccatgtatatactggcttccactgaccgaggagcaggcggcgcagaggctttta
gatcgcacagagcgccaaaaggagcgcgagcgaaggcgcaaagagcagcaagaggaggag
gacaagaaacgggaagaggagaagaaggagaggctgaaggcccgggagaaggacggcggc
atggcggcaagcggcggggcggctgggcgaggagctgaaggagatcgagagcgggaccga
ggccgagacagggaggggaatcgcagtcgagacagggaggggaatcgcagtcgagacagg
gaggggaatcgcagtcgagacagggaggggaatcgcagtcgagacagggaggggaatcgc
agtcgagacagggaggggaatcgcagtcgagacagggagggggaccgtagtcgagacaga
gagggtgaaaagaggtgggacagcagccaccggcccagacgaccttctccaggcgctggt
agtggacggcggtctcgcagtcgtagcaaccccagggacagacgccgctga
DBGET
integrated database retrieval system
