KEGG   Amphiprion ocellaris (clown anemonefish): 111567667
Entry
111567667         CDS       T06018                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
aoce  Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:aoce00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    111567667 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aoce03021]
    111567667 (taf5l)
   03036 Chromosome and associated proteins [BR:aoce03036]
    111567667 (taf5l)
Transcription machinery [BR:aoce03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     111567667 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     111567667 (taf5l)
Chromosome and associated proteins [BR:aoce03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     111567667 (taf5l)
    STAGA complex
     111567667 (taf5l)
    TFTC complex
     111567667 (taf5l)
    SAGA complex
     111567667 (taf5l)
    SLIK complex
     111567667 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd TFIID_NTD2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_Aladin WD40_MABP1-WDR62_1st NBCH_WD40 WDR90_beta-prop_4th Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_IFT140_1st RMC1_N Beta-prop_HPS5 Beta-prop_DCAF4 Beta-prop_SPT8 Tricorn_2nd Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_WDR19_1st PEP5_VPS11_N PROPPIN Beta-prop_IP5PC_F Beta-prop_NWD2_C Nbas_N WD40_like WD_LRWD1 Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 111567667
NCBI-ProteinID: XP_023124693
Ensembl: ENSAOCG00000011766
LinkDB
Position
4:24244933..24252159
AA seq 600 aa
MKRARTEQIQYVVSQYLKRRQYVDTESSLKGAKLFQSAEEMAASLTVQTESGCANVVSAA
PCQSDPQQYETQYSRLRSFLSESEISWAKEVTSILYPLFVYLHLDMVRCGLKGAVDGFYG
RFHGAFLQDSEQRATVEQLRHVLTAQDITTNPKLSAFLEHKYVVHLTEPAYSYLLRYLQS
DDNSALCRALSTHLQVEVTASRRTDYQLYGAAGGATAAPNSTSSWAGVDGAEGGEGVEVP
AGIPQSEAALEALQDSIKKVREGPPSLTTVCFYAFHHTEQMLNTAEVSADSRLLAAGFDS
STVKLWSLRARKLKAKPHQADVSHIHLACDVLEEDVDEEDSSGSEIKTLRGHSGPVFHTA
FLTDSSGLLSCSEDTTIRYWDLGSFTNTALYQGHAYPVWDVDVSPCSLYFASSSHDRTAR
LWTFSRTYPLRLYAGHLSDVDCIKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHRG
PVLSLAFSPNGKYLASAGEDQRVKLWDLASGTLFKDLRGHTDSVTSLSFSPDSSLVASSS
MDNSVRVWDIRNSHSGTPADGSSSELVGLYTGNTSNVLNVQFMACNLLLVTGTAQEKTEQ
NT seq 1803 nt   +upstreamnt  +downstreamnt
atgaagcgggctcgcactgagcagatccagtatgtcgtgtctcagtacctgaagaggagg
cagtatgtggacactgaaagctccctgaaaggagccaagctcttccagtcagctgaagag
atggctgccagcctcacagtgcaaacagagtcaggatgtgccaacgtcgtctctgcagca
ccctgccagtcagatccacagcagtatgagactcagtactccaggctgcgctcctttctc
tcagaatcagaaatatcctgggcaaaggaggtgaccagcatcctatatccgctcttcgtc
tacctccacctggacatggtgcgctgtggcctgaagggggcggtggatgggttttacggt
cgtttccatggtgcctttcttcaggacagcgagcagcgtgccactgtagagcagctccgc
catgttctcactgctcaggacattacaaccaatcccaagctgagtgctttcctggagcac
aagtacgtggttcacctgacggagccggcctacagctacctgctgcgctacctgcagagt
gacgataacagcgccctctgcagggccctcagcacacacctgcaggtggaggtcaccgct
tcgaggcgcacagactaccagctgtacggagctgctggcggtgcaacagctgccccaaac
tccacctcatcctgggcgggagtggacggagcggagggtggggagggggtggaggtccct
gcggggatcccacaaagtgaagcggcactggaggctctgcaggacagcatcaaaaaggtc
cgtgagggtcccccctcgctcaccactgtctgtttttacgccttccaccacacggagcag
atgctgaacaccgctgaggtctcggctgacagtcggctgctggccgctggcttcgacagc
tccacagtgaagctgtggagcctccgagccagaaagctgaaggccaaaccgcaccaggct
gatgtgtcgcacatccacctggcctgtgacgtactggaggaggatgtggatgaagaggac
agctccggcagcgagataaaaacgctgcgaggtcatagcggcccagtgtttcatacggcc
ttcctgacagatagctccggcctgctgtcctgctctgaggacacaacaatccggtactgg
gacctgggcagcttcaccaacacggcgctctaccagggccatgcctaccccgtgtgggat
gtggatgttagcccctgcagcctttatttcgccagcagctcccacgaccgcaccgcccgc
ctgtggacgttctcccgtacctacccgctgcggttgtacgcagggcatctctccgatgtc
gactgcatcaaattccacccaaactccaactacctggccaccggctccacagacaagact
gtccggctgtggagcacacagcagggggcgtctgttcgcctcttcaccggccaccgtggc
ccggtgctgtcgcttgctttctctcctaatgggaagtacttggcgtccgctggcgaggac
cagcgggtgaagctgtgggacttggcatcagggactctgttcaaagacctgcggggacac
acagacagcgtcaccagcctgtccttcagcccggacagcagcctggtggcatcgtcgtct
atggacaactcagtgcgggtgtgggacatccgcaactcccacagcgggacgccagccgac
ggctcgtcaagtgagctagtgggactgtacactggaaacaccagcaatgtgctcaatgtc
cagtttatggcctgtaacctactgctggtcaccggaaccgcacaggagaagacggagcag
tag

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