Amphiprion ocellaris (clown anemonefish): 111567712
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Entry
111567712 CDS
T06018
Name
(RefSeq) RNA-binding protein with serine-rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
aoce03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111567712
03015 mRNA surveillance pathway
111567712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111567712
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111567712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
RRM_7
RRM_5
Motif
Other DBs
NCBI-GeneID:
111567712
NCBI-ProteinID:
XP_023124761
Ensembl:
ENSAOCG00000002404
LinkDB
All DBs
Position
19:32938975..32943490
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AA seq
280 aa
AA seq
DB search
MAPSPTKRKEEDKTKDRGKEKTGVKDGEKERGRDKVKKRRSASTGSSSSRSRSSSTSSSS
SGSSSGSSSGSSSSGSSHSGSSSSRSSSSSSSSGSPSPGRRRHDNRRRSRSASKTQKRSD
DKERRKRSPSPKPTKVHLGRLTRNVTKDHIQEIFSTYGKIKMVDLPVDRLHPHLPRGHAY
VEFETPEEAQKALKHMDGGQIDGQEITASAVLTQRIRPPPRRPSPPRRMPPPPPMWRRSP
PRMRRRSRSPRRRSPARRRSRSRSPGRRRHRSRSSSNSSR
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtcacccaccaagcggaaggaggaggacaaaaccaaagacagaggtaaagag
aagacgggagtgaaggacggggagaaggagcgaggacgggacaaagtgaagaaacgtcgc
agcgcctccaccggcagcagcagcagcaggtccaggtccagctccacctccagcagcagc
tctggttccagctccggttcctccagtggatcaagttcttctggttccagccactctggt
tcttccagctcaaggtcctcgtcctcctccagctcctccggctctcccagccccggtcgc
agacgccacgacaaccggcgccgctcccgctcagcctccaaaacacagaagaggagcgac
gacaaggagcgcaggaagagaagcccgagtcccaaacccacgaaggtccacctgggacgc
ctgaccaggaacgtgaccaaggaccacatccaggagatcttctctacttatgggaagata
aagatggtggacctcccagtggacaggctccacccacacctgcccagaggccacgcctac
gtggagtttgagacccctgaggaggcccagaaggccctgaagcacatggatggaggtcag
atcgacggacaggaaatcactgcttctgctgtgttgactcaacggatccgtcctccgcct
cgcagaccttctcctcctcgccggatgcctccacctccacccatgtggcgtcgcagccca
ccacgcatgaggagaaggtctcgttctcccaggaggaggtctccggctcgccgtcgctct
cgctccaggtctcctggtcgcagacgtcaccgctcccggtccagctccaactcctccaga
tag
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