Amphiprion ocellaris (clown anemonefish): 111567765
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Entry
111567765 CDS
T06018
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04514
Cell adhesion molecules
aoce04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
111567765 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111567765 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
aoce00535
]
111567765 (sdc3)
Proteoglycans [BR:
aoce00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
111567765 (sdc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Motif
Other DBs
NCBI-GeneID:
111567765
NCBI-ProteinID:
XP_054873817
Ensembl:
ENSAOCG00000024887
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Position
15:10139241..10187481
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AA seq
457 aa
AA seq
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MKLPWLLALTALLAHATTAQTWSPSIDDEGSTRDEFYDDEDLYSGSGSGFPEISLRPTSV
AVSFTTEEPLLLSTTQATGPAPSASPAAEPSPSPEDPTGTPLPTEVDGESGAFWDRDKEL
EKEREREMEKEQERQRELEREREKERQLERERERERERERVREMERERERERERERERER
EREREKERERQRERELERERELERIRAAAARTTAAPRSPAAVPVVTTNPATSPSESAAPS
AGSDDLSTIEEEDDVYLSPEPTSFYPGFDMEITTEEETSTTAETTPEPTTAAPTTTTTTT
AATTIKTRFPFRPRVPMTTATQAAPAERTTRPQQPATTQEANNEVGAAGPSGDFEIRDDR
RNGLGRGVMPVDPDLMGNTVDGGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVM
LLVYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccgtggctcctggcgctcacggcgctgcttgctcacgccaccacggcacag
acgtggtctccgtcgatcgacgacgaaggctcgacgagagatgagttctacgacgatgag
gacctctactcaggctccggctccggctttcctgagatcagtttgaggccgacatcggtg
gccgtatccttcaccacggaggagcccctcctcctgtccaccacccaggccacaggcccc
gccccctctgcctcacctgcggccgagcccagcccgagccccgaggaccccaccggcacc
ccgctgcccaccgaggtagacggagagagcggtgcattctgggacagagacaaggagctg
gagaaggagagagaaagagagatggagaaggagcaagagaggcagagggagctggagagg
gagagagagaaggagagacagctggagagggagagagaacgagagagggagagggagcgg
gtgagggagatggagagagagagggagagagagagggagagggagcgagagagggagcgt
gagagagagcgagagaaagagcgagagaggcagagagagcgtgaactggaaagagagaga
gagctggagaggatccgagccgccgccgcccggactaccgccgccccccggtcacctgct
gccgttcccgtggtgaccaccaacccggcaaccagtccttcggaaagtgccgcaccctcc
gccggttcagatgacctgagcaccatagaagaagaagacgacgtctacctgtcacctgaa
cccacctcgttttaccccggcttcgacatggagatcaccacagaagaagagacgtccacc
acagcagagaccacccctgagcccacgacagccgcacccaccaccaccaccaccactaca
gctgccaccactatcaagaccaggttccccttcaggcccagggttcccatgacgacggcc
actcaggcggcgccagcagagaggacgacccgcccacagcagccagcaacaacacaggag
gccaacaacgaggtgggggccgcgggaccaagcggagatttcgagattcgtgacgatcgc
cgcaacggtctgggccggggcgtgatgccagtggacccggatctgatgggaaacacagtg
gacggagggagctctgccgcccagctgccacagaagaacatcctggagaggaaagaggtc
ttgatagcggtgatagtgggaggcgtggtgggcgccctgttcgccgccttcctggtgatg
ctgctggtgtacaggatgaagaagaaggacgagggcagctacacgctggaggaacccaaa
caggccaccgtcacctaccagaaaccagacaagcaggaggagttttacgcataa
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