Amphiprion ocellaris (clown anemonefish): 111567911
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Entry
111567911 CDS
T06018
Symbol
ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111567911 (ddx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aoce03041
]
111567911 (ddx5)
03009 Ribosome biogenesis [BR:
aoce03009
]
111567911 (ddx5)
Enzymes [BR:
aoce01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111567911 (ddx5)
Spliceosome [BR:
aoce03041
]
Complex A
U1 snRNP components
U1 related factors
111567911 (ddx5)
Complex B
111567911 (ddx5)
Ribosome biogenesis [BR:
aoce03009
]
Eukaryotic type
Pre-60S particles
Helicases
111567911 (ddx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111567911
NCBI-ProteinID:
XP_023125054
Ensembl:
ENSAOCG00000022960
LinkDB
All DBs
Position
19:6294051..6299681
Genome browser
AA seq
616 aa
AA seq
DB search
MPGYSDRDRGRDRDRDRGYGGGPPRFGGNRGGGGGKFGNPGERLRKKHWNLDELPKFEKN
FYQQHPDVARRSAQEVEQYRRSKTITFKGRDCPNPIAKFHEASFPSYVMDVINKQNWTEP
TPIQAQGWPLALSGKDMVGIAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTR
ELAQQVQQVAAEYGRASRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKT
NLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEY
VQINIGALQLSANHNILQIVDVCNDGEKENKLIRLLEEIMSEKENKTIIFVETKRRCDDL
TRRMRRDGWPAMGIHGDKSQQERDWVLNEFKYGKAPILIATDVASRGLDVEDVKFVINFD
YPNNSEDYIHRIGRTARSQKTGTAYTFFTPNNMRQASDLISVLREANQAINPKLLQMAED
RGGRSRGGRGGDYDRRDRYSSGRRDFGSFRDRNNDRGFDNGPGKNFSGSQNGGYGGNNGS
SNGFSGGSYNGNGQSNFNQTGSFGGQNNFQAQQFAPNKAVTQNGATHPPFPFPQVQAPQQ
HPPPLVPYPMPPQFSQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatattccgacagagaccgcggcagggatagagatagagacagaggctatggc
ggtggtccacctcggtttggtggaaaccgcggcggaggcggaggaaagttcgggaatccc
ggtgaacggctgaggaagaaacactggaacctggacgagctcccgaagtttgagaaaaac
ttttaccagcagcatcccgacgttgcccggaggtccgcgcaagaagttgaacagtacaga
aggtccaaaaccattacattcaaggggagagactgcccaaaccctattgcaaagttccat
gaagccagcttcccatcttatgtgatggatgtgatcaacaaacagaactggactgaacca
acaccaatccaagctcagggctggcctctggctctcagtggcaaggatatggttggcatt
gcacagactggttctggcaaaacgctttcctatctgctccctgccatcgtgcatatcaac
caccagccgtttttggaacgtggagacggtccaatttgtttagtgcttgctccaacccgt
gagctggcacagcaggtgcaacaggtggctgcagaatatggcagagcttctcgcctcaag
tccacctgtatctacggaggagcacccaagggacctcagatccgtgacctggaaagaggt
gtggagatctgcatcgccactccaggcaggctcattgacttccttgaggcaggaaagacg
aatcttcgccgatgcacttaccttgtgctggatgaggctgacagaatgctggacatgggc
tttgagccgcagatccggaaaattgttgaccagattagacctgaccgacagactctgatg
tggagtgctacttggcctaaagaagttcgccagctggcagaggacttcctgaaggagtat
gtgcagatcaatattggggcactgcagctgagtgccaaccacaacattctgcagatagtg
gatgtttgtaatgatggagagaaggagaacaagctcattcgtctgcttgaggaaattatg
agtgagaaagagaacaagaccatcatctttgtagagacaaagagacggtgtgatgacctt
accaggaggatgaggagggatgggtggcctgctatgggtatccatggagataaaagccag
caggaaagagactgggttctcaatgagttcaaatatgggaaggctccaattctcattgct
acagatgttgcctccaggggtcttgatgttgaagacgtgaaatttgtcatcaactttgac
taccccaacaactccgaagactatatccaccgcattggcagaacggctcgtagccaaaag
acgggcacagcctataccttcttcactccgaacaacatgagacaggccagcgacctcatc
tctgtgctgcgggaggccaaccaggccatcaatcccaagctcctccagatggcagaagac
agaggaggtcgttcaaggggaggccgaggtggtgactatgaccgtcgggataggtattcc
tccggaaggcgtgattttggcagttttagggacaggaataatgatagaggctttgacaat
ggaccaggaaagaacttttcaggttcacagaatggaggctatgggggtaacaacggcagc
agcaatggcttcagtggaggaagctacaacggtaatggacagtccaactttaaccaaact
ggctcctttggaggccagaacaacttccaggcccaacagttcgcccccaacaaggccgtc
acacagaacggtgctactcatcccccgttccccttcccccaggtacaggctccacagcag
caccctcctccactggtgccgtaccccatgcctcctcagttctctcagtaa
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