Amphiprion ocellaris (clown anemonefish): 111567952
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Entry
111567952 CDS
T06018
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like isoform X2
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aoce04040
]
111567952
Ion channels [BR:
aoce04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
111567952
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
LSDAT_prok
Ion_trans
YVC1_C
Motif
Other DBs
NCBI-GeneID:
111567952
NCBI-ProteinID:
XP_035803627
Ensembl:
ENSAOCG00000021613
LinkDB
All DBs
Position
1:complement(43683342..43716423)
Genome browser
AA seq
1563 aa
AA seq
DB search
MDSRGRRGTNGSFKRSSIKRSTSSGSQKTQKAWIERTFQKRECIQIILSKDASRCSCGQL
VAQHTSIPPKDEGAPLVQLEPAERWSALKHTQTSPTDAYGILEFQGGGLINKAMYIRVSY
DSKPDSLLHLMVKDWQLELPTLLISIHGGLQNFDLPPKLKQVFGKGLIKAAVTTGAWIFT
GGVSTGVIRHVGDALKDHSSKSRGKVCAIGIAPWGIVENKEDLVGRDVTRSYQTMSNPLS
KLSVLNGSHSHFILSDNGTSGKYGAEVRLRRQLEKHIALQKINTRLGQGVPVVCLIVEGG
PNVITIVLESLREEPPVPVVVCDGSGRASDILSFAHRYCEEDGVVSDSVKDQLLVTIQKT
FNYSRGQAQQLFLMVMECMKKRALITVFRMGSEGQQDIEMSILTALLKGTNASASDQLSL
ALAWNRVDIARSQIFVYGHHWPPVSISPADRPKSPAAQRPAAGGAAGKGKARGKKGKGSK
AKPEPPEETDPRKLELLSWVNSLEQAMMDALVLDRVDFVKLLIENGVNIHHFLTIPRLEE
LYNTKLGPANTLHFVVRDVKKGNLPPDYQITLIDIGLVLELLMGGAYRCNYTRKTFRTLY
NNLYGLKRPKALKLLGMEDDEPRPKGKGKKNKKKEEEVDIDVDDPEVSRFQYPFHELMVW
AVLMKRQKMALFLWQRGEEAMAKALVACKLYKAMAHESSQSELVDDIYQDLENNSKEFGQ
LAYELLDQSYKHDEQVAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWM
GCLRMGKSNSLKVILGIVFPPAILLLDFRLGDEASHHSSKDSEDVKAKDDDKSNKDAVSN
VDSMSRKGDEEENQKTHRKRIPIGRKIYEFYNAPFTKFWFNTISYLVYLMLYNYIILVKM
ERWPSLQEWIVISYIITLGLEKVRQILMSEPGKLKQKINVWLEDYWNITDLVAIWVFLLG
LLLRLQNHPYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIM
LVVLMSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDLYAMEINPPCGDN
MYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQ
RYQLIMTFHDRPILPPPLIVFPHIYIVLKRLCCRCQRRPEGEHDDRERRLQLVLNAEELK
SLHEFEEQCVEEYFREKDDEKQSSNNERIRVTSERVENMFMRLEEVNEREHSMKASLQTV
DLRLSQLEEFSGRMINAVEKLAGVDRAELVRSHSRASSMCDPTSLLRHGSVNSADGYSLY
RYQLDHEDRTSMTGDLDGPDKKVQLSPERRGGEGGGAAGDVKEFGSTLEVQGLKEGAQSM
SSVDILISPCDPDLQPNTRTSSAQDDPTKAEVEEPSDKSRLEAAVSFPLDRSKISHYSPT
LSSSPSSHRRSISGIIYSPTQEDQQGATGPPRETPEKDGGQESELPSKQPEGEANGPDED
LMVGEDSKYLTLRSKSLNINPRKTRTKKEDEEKPRSASSVKDLLSAFSGGTTGPRSRSRD
SDC
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggacagcagaggaaggagagggacgaatggatccttcaaacgctcatctatcaaacgc
agcacgtcctctggatcacagaagactcagaaagcgtggatcgagagaaccttccagaag
agagaatgcatccagatcattctgagcaaagatgccagcaggtgcagctgtggtcagctg
gtggctcaacacacctccatccctcccaaagacgaaggagctccgctggtccagctggag
cctgcagagaggtggagcgccctgaaacacacccagacctccccgaccgatgcctatggc
atcctggagttccagggaggaggactcatcaacaaggccatgtacatcagggtctcctat
gactccaaaccggactccctgctccacctcatggtgaaggactggcagctggagctcccc
acgctgctcatctccatccacggaggccttcagaacttcgacctgccaccaaaactgaag
caggtcttcggtaaaggactgatcaaagctgctgtcaccactggggcctggatcttcacc
ggaggagtcagtacaggggtgatccgtcatgttggagacgccctgaaggaccactcatct
aagtccagaggtaaagtctgcgctatcggcatcgcaccgtggggcatcgtggagaacaaa
gaagatctggtcggcagagatgtgacccggtcctaccagaccatgtccaacccgctcagc
aagctgtcagtcctgaacgggagccactcccacttcatcctgtccgacaacgggaccagc
gggaagtacggcgccgaggtccgcctccgccggcagctggagaaacacatcgctctgcag
aagatcaacacacgtttgggccagggcgtcccggtggtctgtctgatcgtggagggaggt
cccaacgtcatcaccatcgtcctggagagtctgagggaggagcctccggtcccggtggtg
gtctgtgatggcagcggccgagcttcagacatcctctcattcgctcacagatactgtgag
gaggacggggtggtgagcgacagcgtcaaagaccagctgctggtcaccatccagaagacc
ttcaactacagccgaggccaggcccagcagctgttcctcatggtgatggagtgcatgaag
aagagagctctgatcacagtgttcaggatgggctcagagggacagcaggacattgagatg
tccatcctcacagctctgctcaaaggtacaaatgcgtcggcgtctgatcagctgagtttg
gctctggcctggaacagagtggacattgctcgcagtcagatctttgtgtacggacaccac
tggcctcctgtcagtatttcaccggctgatcgccctaaaagcccggcggcccagaggcca
gcagcaggaggggcagcagggaaaggaaaagcccggggcaagaagggcaaagggagcaaa
gccaaaccagaaccacctgaagagaccgacccacgaaaactggagctgcttagctgggtg
aactctctggaacaggccatgatggatgctctggtgttggaccgggttgactttgtgaag
ctgctgattgagaacggagtgaacatccatcacttcctcaccattccccggctggaggag
ctctacaacacgaagcttggaccggccaacacgctgcacttcgtggtccgagatgtcaag
aaggggaaccttcctccagattaccagatcacactgatcgacatcgggctggtgctggag
ctcctgatgggcggagcttaccgctgcaactacaccaggaagaccttcaggacgctttac
aacaacctgtacggcctcaaaagacccaaagccctgaagctccttggcatggaggacgat
gagccccgacccaaaggaaagggaaagaagaacaagaagaaggaggaggaggtggacatc
gacgtggacgaccccgaggtcagccggttccagtaccccttccacgagctcatggtgtgg
gcggtgctgatgaaacgccagaagatggcactgttcctgtggcagcgtggtgaggaggcc
atggccaaagctctggtggcctgtaagctctacaaggccatggcccacgagtcgtcccag
agcgagctggtagacgacatctaccaggacctggagaacaactccaaggagttcggtcag
ttggcctacgagctgctggaccagtcgtacaaacacgacgagcaggtggcgatgaagctg
ctgacctacgagctgaagaactggagtaactccacctgcctgaagctggccgtcgccgcc
aaacaccgagacttcatcgcccacacctgcagccagatgctgctgaccgacatgtggatg
ggctgtctgaggatgggcaagagcaacagtctgaaggtgatcttagggatcgtcttccct
cctgccatcctgctcctggacttccgtctcggagatgaagcttcacatcattcatccaaa
gacagtgaagacgttaaagctaaagacgatgacaaatccaacaaggatgccgtctccaac
gtggactctatgtcacggaaaggagatgaagaggagaaccagaagactcaccgcaagagg
attcccattgggaggaagatctacgagttctacaatgctccgttcaccaagttctggttc
aacacgatctcctacctggtgtacttgatgctgtataactacatcatcctggtgaagatg
gagcgctggccgtccctgcaggagtggattgtcatctcctacatcatcaccctgggcctg
gagaaagtccgacagatcctgatgtcagaacctgggaagctgaagcagaagatcaacgtg
tggttggaggactactggaacatcaccgacctggtggccatttgggtgttcctgctgggc
ctcctgctgcggctgcagaatcacccctacatgggctatggacgcgtcatctactgcgtg
gacatcatcttctggtacatccgagtcctcgacatcttcggagtcaacaagtacctgggt
ccctacgtcatgatgatcggcaagatgatgatcgacatgctgtacttcgtggtcatcatg
ttggtggttctgatgagcttcggcgtcgctcgccaggcaattcttcacccagacgaggaa
ccgacctggcgtctggcccggaacatcttctacatgccgtactggatgatctacggagag
gtgttcgccgactccatagacctttatgcgatggagatcaaccctccgtgtggagacaac
atgtatgatgaagatgggaagaagcttcctccctgcatccctggagcctggctgacccct
gccatcatggcctgctacctgctggtggccaacatcctgctggtcaacctgctgatcgcc
gtcttcaacaacaccttcttcgaagtgaagtccatctcgaaccaggtgtggaagttccag
cgttatcagctgatcatgaccttccacgaccgacccatcctgcctcccccccttatcgtc
ttcccccacatctacatcgtcctgaagaggctctgctgccgctgccaacggaggccggag
ggcgagcatgacgaccgggagagacgcctccagctggtgctgaacgccgaagagctcaag
agtctccatgagtttgaggagcagtgtgtggaggaatacttcagagagaaggacgacgag
aagcagtcgtccaacaacgagcggatcagagtcacgtctgagagggtggagaacatgttc
atgcgtctggaggaggtgaatgagagggagcactccatgaaggcctccctgcagaccgtg
gacctccgcctgtctcagctggaggagttctctggccggatgataaatgccgtggagaag
ctggctggcgtggaccgggctgagctggtccggtcccactccagagcatcctccatgtgt
gaccccacctccctgctgcgtcacggcagtgtcaacagtgccgacggctacagcctgtac
cggtaccagctggaccatgaagaccggacctccatgaccggagacctggacggacctgac
aagaaggtccagctgagcccagagagacgaggaggtgaaggaggtggtgcagcaggagat
gtgaaggagtttggttcgactctggaggttcaaggactgaaggaaggagctcagtccatg
tctagtgttgacatcctgatctccccgtgtgatcccgacctccaaccaaacaccagaacc
tcctcagctcaggacgacccaaccaaggctgaggtggaagaaccgtcagataagagccga
ctggaggcagcagtgtccttccccctggacaggtccaagatctcccattactctccgacc
ctcagcagctccccgtcctcccacaggaggtccatcagtggtatcatctacagccccacc
caggaggaccagcagggggccactggtccacccagagagacaccggagaaggacggagga
caggagtcagagctgcccagcaaacaaccagagggtgaagccaatggaccggatgaggac
ctgatggtgggggaggacagcaagtacctgacacttcgctccaagagtctcaacatcaac
cccaggaagacgaggacaaagaaggaggatgaggagaaacctcgctcagccagcagcgtc
aaagacctgctgtcagccttcagtggggggaccaccgggccacggtccaggtccagagac
tctgactgctga
DBGET
integrated database retrieval system
