Amphiprion ocellaris (clown anemonefish): 111568025
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Entry
111568025 CDS
T06018
Symbol
nup98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111568025 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111568025 (nup98)
03036 Chromosome and associated proteins [BR:
aoce03036
]
111568025 (nup98)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
111568025 (nup98)
Chromosome and associated proteins [BR:
aoce03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111568025 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
111568025
NCBI-ProteinID:
XP_023125234
Ensembl:
ENSAOCG00000018462
LinkDB
All DBs
Position
14:complement(34283919..34330521)
Genome browser
AA seq
1755 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTSSTFGQQNTGFGTPGGFGTSAFGTTTNTGGLFGSTQNKPGG
LFGSSTFSQPATSSTSTGFGFGAASGTSTSLFGNTGTGTSGGLFSQQNNAFGANKPTSFG
SFGTSTSSGGLFGSTNTTSNPFGGTNSLFGGSGFSAAQQPGTTVKFNPPTGSDTMVKAGV
TTSINTKHQCITAMKEYENKSLEELRLEDYQAGRKGPTNPMAPGTGGLFGPATATSSATT
GLFGSAAPNTSFSFGQNKSTFGGAATGGFGTTTGGLFGGQTQQQAGSLFKPFGQTTTAQS
TGFSFGNTNTMGQANTSSMGLFGNTAASQSGGLFGTAQTSTATGFGTATGLFGQTNTGFG
NVGTQQSLFGNKTAGFGPTTTSAPSFGTGTGLFGNKPALTLGTGTNTSTFGFGANPAGGS
LFGNKSTTGGLGTGLGTSFGTAVGTGQTLFGNNQNKLGTTLGTMGTFGTTGFNSGTSTLG
FGAPQQPVALTDPNAAAAQQAMLQQQLSVLAYSPYGDSPLFRNPLSDPKKKEERLKPTNP
TAQKALTTPTHYKLTPRPATRVRPKALTSSGGSKSQLFDGLDDDEPSLTNGAFIPRKSIK
KLMLKNLNSSQYSSPINKESDDLASPPEYPQNGHSHVEEEEELREAPGPSGRPDDDPEVT
HFYVNPIAKPIPQGRAQTSLQDTISDLNMHKPSRNGLELSNDDVSASLGEESLQEEREEE
QLESQQSPHPAGIVLNRVGYYTIPSMDDLAEMVDENGECVVENFTIGRKGYGSIFFPGEV
NVTGLNLDEIVHFRRKEVIVYPDDKNKPPEGEGLNRRAEVTLDGVWPNDKTTCTQIRSPE
RLTDMNYEGRLEKASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEDEDVPPKADPK
KLKTTMTLPPSRLQQQLPPSQQQVAPQAQSTVVMDLPGGVSELDSDMADITQSYPTDSML
RGEEDGDLPAGEMDTTAGKLGGFASAEHDGVSTSGHIASSFGINPHTLQIMKASLFAEDE
DDGDMFQDQAVMKISSDVSSPRLVLPGAHGRPSVGGLLQARFTSGLLSQLSDSPCPPLPS
SRASPAAIEPSRSLQWAGPGPSSFLVPPRTPEPSIRTVGVRRLGGPVPMKESVTQGKGAL
LMDTGLFAVRSFRVGWGPGWTLAHCGSRLSSPTSKQLEYQELTTKTDFSFLPKPAKSKPL
TESPYKVVLEQLVGLEPPQGKTSEEEGDEESQAVLQRPLEICLKHSTVSTPDASACPLVR
PQLGVAALHEYAEWITELNDKQGDADPLLGHWAEVWTLCEALWGRLGPTDQEPDVEAPSE
YEQQLERRRTFSSWLSHGATCRVEEEVALVGKGCHTEAIFSYLTGNRISEACRLAQKEGD
HRLSLLLSQAMGSQYCRDLLALQLADWNRMQTDCYLPEERLRIFTLLAGKPVWQSSESVV
NVCSELDWKRCLAVHLWFMLPPTASVADALAKYEAAFQGSCDSGKYACAPLPPYLEADQP
DLEEEEEEEAKRPLYDTCFHLLKLYSDRHYSLQQLLDPLTVTWERLDYRLSWHLWGVLQA
LHYGHLSSSRQGLLHASYAAQLESAGLWHMAVFILLHIPDHSQRERAVREMLTLHCPLQE
TDESVRRERFLTERLLVPERWIHEAKATRARRDADRHQQALHLYRAGYWNQCHRLLIQHL
ASDCIINDNHDYLLEFLEGLAVPEHSATIQDWDTAGRVYLDYIRVIKTLQDIQQVNTDPL
RPQSSSKSCYTSLKT
NT seq
5268 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcgtttggtactcccttcggtggagggacgggagggtttggaacctca
tcaacctttggtcagcaaaacacaggttttgggacgccgggaggcttcgggacgtctgcg
ttcgggacgaccaccaacactggagggctgtttggttccacacagaataaaccaggtggt
ctttttggctccagtaccttcagccaaccagcaacttcctccaccagcaccggctttggt
tttggtgcagccagcggcacgtccaccagcctgtttggcaacaccggaacaggcaccagc
ggcggacttttctcccagcagaacaatgccttcggtgccaacaagcccacctcttttgga
agctttgggacgagcaccagcagcggcgggctgttcgggtccaccaacaccacctccaac
cctttcggtggaaccaactcgctgttcggaggctccgggttttctgccgcacagcagcca
ggaaccaccgtgaaattcaaccccccaactggaagtgacacgatggtgaaagcaggtgtg
accacgagcatcaacacaaagcaccagtgcatcaccgccatgaaggagtacgagaacaaa
tccttggaggaattgaggctggaggactaccaggcgggcaggaaaggtccgaccaacccg
atggctccagggaccggcggcctgtttggtccggccacagccacatccagcgccacgact
ggcctgttcggctctgcggcccccaacaccagcttctctttcggccagaacaagagcacc
tttggaggcgcagccaccggcggcttcggtacaactacaggaggtctgtttggcggtcag
acccagcagcaagccggcagcctcttcaagccgttcggtcagaccaccaccgctcagagc
accggcttctccttcggcaacaccaacaccatgggacaggccaacaccagcagcatgggt
ttgtttgggaacacggcagcgtctcagtccggtggcctgtttggcacagctcaaaccagc
accgccaccggttttgggacggccactgggctgttcggccaaaccaacactgggtttgga
aacgtgggcacgcagcagagtctattcggcaataagacggccggcttcggccccaccacc
accagcgctccgtcctttggcacaggcaccgggctctttggaaacaagccggccctcacg
ctgggaaccggaaccaacacctccaccttcggttttggggcgaaccctgctggagggagt
ctgtttgggaacaagtcgaccaccgggggactggggactggactgggaaccagctttgga
acagcagtgggcacaggacagactctgtttgggaacaaccagaacaaactgggcaccaca
ctgggaacgatgggaacgtttggaaccacgggattcaacagtggaacgagcacgctgggc
ttcggagctccacaacaacctgttgccctcacagatccaaacgctgccgccgcccagcag
gccatgcttcagcagcagctcagcgttctggcctactcaccgtacggagactcaccactg
ttcagaaacccgctgtcagaccccaagaagaaggaggagcgtctgaaaccaaccaatcca
acggctcagaaggccctgaccacgcccacccactacaagctgacgccccgtcctgcgacc
agagtccggcccaaagcgctgacgtcttcgggcggctctaagtcgcagctcttcgacggc
ctggatgacgacgagccgtcgctcaccaacggagcctttatcccgaggaagagcataaag
aaactgatgctgaagaaccttaacagcagtcagtacagcagcccgattaacaaagagagt
gacgacctggcctcgccaccggagtatccacagaacggacacagccatgtggaggaggag
gaggagctgagggaggcgccgggacccagcggccggccggacgacgacccggaggtcacc
cacttctacgtcaaccccatcgccaagccgatccctcagggccgagcccagaccagtctg
caggacaccatcagcgacctgaacatgcacaaaccgtccaggaacggcctggagctgagc
aacgatgacgtgtcggcgtctctgggagaagaatctctgcaggaggagagggaggaggag
cagctggagtcccaacagtctcctcatcctgcaggcatcgttctgaaccgtgtggggtat
tacacaatcccctccatggacgacctcgctgagatggtggacgagaacggagagtgtgtt
gtagaaaacttcaccatcggcaggaaaggttatggctccatcttcttccctggcgaggtg
aacgtgacgggactgaaccttgacgagattgtccacttcagacgtaaagaggtgatcgtg
tacccagacgacaagaacaagccgccagagggggaggggcttaacaggcgagcggaggtg
actctggacggtgtctggccgaacgacaagacaacctgcactcagatcagaagtcctgaa
cgcctcaccgacatgaactacgagggtcggctggagaaggcctcgcgcaagcagggagcc
cgtttcctcgagtaccggcccgaaaccggctcctgggtgttcgaggtggcccatttctcc
aaatatggcctccaggactcggatgaagacgaggacgtgccgcctaaagccgaccccaag
aagctgaagacgacgatgactcttcctccctccaggctgcagcagcagcttcccccctcc
cagcagcaggtggcgccacaggctcagtccacggtcgtcatggatcttccgggcggcgtc
tcggagctggacagcgacatggcggacatcacccagagctacccgacggacagcatgctt
cgaggagaggaggacggcgacctgccggcgggtgaaatggacacaacggccgggaagctc
ggaggttttgcgtccgcagagcacgacggtgtctccacatctggccacattgcgtcctcg
tttggcatcaacccgcacacgctccagatcatgaaggcatctctgtttgctgaggatgag
gatgacggtgacatgttccaggaccaggcagtgatgaagatctcctctgatgtctcgtct
cctcgcctcgtcctgccgggagctcacggccgaccctccgtcggcggtctccttcaggct
cgtttcacctccggtctcctctctcagctctcagactctccctgccctcctctgccgtca
tcccgggcgtctccggcggcgatcgaaccctcacgctcgctgcagtgggcggggccagga
ccctcctctttcctggttcctcccaggactccggagccttcgatcaggacagtcggggtc
cggcggctgggcggccccgtccccatgaaggagtcggtcacccaggggaagggagctttg
ctgatggacaccgggctatttgcggtccgttccttccgggttggttggggtcctggctgg
acgttggctcactgcggcagccggctgagttcaccaacatccaaacagctcgagtaccaa
gaactgacgaccaagaccgacttcagcttcctgcctaaacctgccaagagcaaaccactg
acagaaagcccctacaaggtggtgctggagcagctggtgggtctggagcctccacagggg
aagaccagtgaggaggagggggatgaagagagccaggcggtgctgcagcgccccctggag
atctgcctgaagcacagcaccgtcagcaccccggacgcctccgcctgcccgctggtacga
ccgcagctcggtgtggcggcgctgcacgaatacgccgagtggatcacagagctgaacgac
aagcagggagacgcagatcccctcctgggtcactgggccgaggtgtggacgctgtgcgag
gctctgtggggtcggttgggccccacggatcaggagcccgacgtcgaggcacccagtgag
tacgagcagcagctggagaggcggcggaccttctcatcctggctgtcccacggcgccacc
tgcagggtggaggaggaggtggctctggtggggaaggggtgccacacggaggccatcttc
agctacctgacaggaaaccgcatcagcgaggcgtgtcgactcgctcagaaggaaggagac
caccgcctgtccctgctgctgtcccaggccatgggttctcagtactgccgggaccttctg
gcccttcagctggccgactggaaccgcatgcagacagactgctacctgcctgaagaacga
cttcgcatcttcacactgctcgccggcaagcctgtgtggcagtcgtctgagtctgtggtg
aacgtttgctccgagttggactggaagcgctgcctggccgtccacctctggttcatgctg
cctccgaccgcttctgtggccgacgccctcgccaaatacgaagccgcctttcagggctcc
tgtgatagcgggaaatacgcctgcgcccctctgccgccctacttggaggcagatcagcca
gatttggaggaggaggaggaggaggaggctaaacggccgctgtacgacacctgcttccac
ctgctcaaactctacagcgacagacactacagcctgcagcagctgttggatcctctcacc
gtcacctgggagcgtctggattaccgcctcagctggcacctgtggggcgtcctgcaggcg
ctgcactacggccacctgagctcctcgcggcagggactcctccacgccagctacgccgcc
cagctggagagcgccggcctctggcacatggccgtcttcatcctgctgcacatccccgac
cacagccagcgggagcgagccgtgagggagatgctgaccctccactgccccctgcaggag
acggacgagtcggtccgcagggagcgcttcctgaccgagaggctgctggtcccagagcgc
tggatccacgaggccaaggccacccgggccagacgcgacgccgaccggcaccagcaggcg
ctgcacctgtaccgggccggatactggaaccagtgccatcgactgctcatccagcacctg
gcctcagactgcatcatcaacgacaaccacgactacctgctggagttcctggagggtctg
gcggtccctgaacacagcgccaccatccaggactgggacactgcagggagggtttacctg
gactacatcagggtcatcaagactctgcaggacatccagcaggtaaacacagacccactg
agacctcagagctcctctaagagctgctacacatccttaaaaacatga
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integrated database retrieval system
