Amphiprion ocellaris (clown anemonefish): 111568079
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Entry
111568079 CDS
T06018
Symbol
ptch2
Name
(RefSeq) protein patched homolog 1
KO
K11101
patched 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
111568079 (ptch2)
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Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
Motif
Other DBs
NCBI-GeneID:
111568079
NCBI-ProteinID:
XP_023125319
Ensembl:
ENSAOCG00000016756
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All DBs
Position
10:complement(16508873..16538764)
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AA seq
1492 aa
AA seq
DB search
MASDRGVPGAGVFGDLPPSYTRSQPPANPDLLRRPSYCHAAFALKQISKGKAVGQKAPLW
IRARFQAFLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETNIEQLWVEAGSRVST
ELRYTREKQGEESVFTSQMLIQTPKEEGTNILTQEALLVHMEAALSASKVQVSLFGKSWD
LNKICYKSGVPIIENVMIERMIDKLFPCMIITPLDCFWEGAKLQGGSAYLPGMPDIQWMN
LDPVKLMEELSQFTSLEGFKEMLDKAQVGHAYMNRPCLDPSDPDCPLSAPNKEQGESPDI
AGRLQGGCHGFSQKFMHWQEELILGGRVKNSQDALLSAEALQTMFLLMSPKQLYEHFKDD
YEIHDINWNEEKATAILESWQRKFVEVVHQSIPSNSSQSIHAFSTTTLNDIMKSFSDVSV
IRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAAT
TQVLPFLALGIGVDDMFLLAHSFTETGINIPFKERTGDCLRRTGTSVALTSVNNMIAFFM
AALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLHRREDKRLDVLCCLYSPCSDR
VIHLSPHELSDAGEQPHTPTTGTAHTHQYAAGSTITTSTQITTTVQAFTQCDAAGQHIVT
ILPPTSQISTSPPSIILCPTSQAQAISPSPTTTSVPDPYGSQLFTPTSSSTRDLLAQVDD
SKSGKKCVPLPFLHWNLSSFAREKYAPLLLKPKSKALVVVLFLGLLGLSLYGTTMVHDGL
YLTDIVPRDTKEYDFIDAQFKYFSFYNMYLVTMDGFDYARSQRLLIQLHNAFNSVKYVVR
DGDNKLPRMWLHYFQDWLRGLQAAFDADWQAGRITADSYRNSTEDGALAYKLLIQTGSKK
EPFNYSQLTSRRLLDAEGLIPPEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYD
TTGENLRIPAAEPLEFAQFPFYLNGLRQASDFVEAIESVRAICDEFSRKGVFNYPNGYPF
LFWEQYIGLRHWFLLAISVVLACTFLVCAILLLNPWTAGIIVFILAMMTVELFGIMGLIG
IKLSAIPVVILIASVGIGVEFTVHIALGFLTAIGNRNHRSAVALEHMFAPVVDGAISTLL
GVLMLAGSEFDFIMRYFFAVLAILTVLGVLNGLVLLPVLLSMMGPPAEVTPVDNASCLPT
PSPEPPLPPPMTHHGYYTGHHNPRSSRQQAFSESSDSEYYSELTTTSATGEEDYKYCDRN
AYLASHTGVPPATSHILLEASKNPSFPKLTVVKPFRENATAPGGRIEPLNESSHNAQSHL
SSQVTCWDGNKREQQKGLQRLQAPAGQHLPSDRANFPGRTCQSGPRLQNGRGPQPNRTKG
SSYIHSNSALPTQQGSAGGPVTMVTATASVTVAVHPTLPGAAYQGYMHEGFDTDSESDCF
EAAKRTCGDKTNFSSCKRDSLELQDLEAAQGQTEYQLSKTQGGLRIQASKDC
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggatcgcggggtcccaggggccggcgtctttggagatttacccccgagttat
acgcgctcccagccgcctgcgaacccagacctgctccggagacccagctactgccacgct
gctttcgcacttaaacagatctcaaaggggaaggcggtaggtcagaaagctcctctgtgg
atccgggcgaggttccaggccttcctgttctctctgggctgccacatccagaggcactgt
gggaaggtcctctttattggactcttagtattcggggctctttctgtgggactccgagtc
gcagccatcgagacaaacatcgaacagctatgggtggaagctggcagtcgggtgagcaca
gagcttcgctacaccagggagaagcagggagaggagtcagtatttacctcacagatgctt
atccagacccccaaagaagagggcacgaatattcttacccaggaagctttgctggttcac
atggaagccgccctgtcagccagcaaggtgcaggtgtcgctgtttggaaagtcgtgggat
cttaataaaatatgctacaaatcaggagttcctattatagaaaatgtcatgattgaaagg
atgattgacaagctattcccctgtatgataatcaccccattggactgtttttgggaaggg
gccaaactccagggaggctctgcctatttaccgggtatgccagatatccagtggatgaat
ttagatccagtcaagctgatggaggagctgagtcagttcacttccctggaagggtttaag
gagatgctggacaaagcccaggtgggacatgcctacatgaacaggccatgtctcgacccc
tcagaccctgactgccctctcagtgcacccaacaaggaacaaggagagagtcctgacatc
gctgggcgtctgcagggtggttgccatggtttcagccagaagtttatgcactggcaagag
gaactcatcctgggagggcgagtcaagaacagccaggatgctctgctgagtgcggaggct
ctccaaaccatgttcctgttgatgagtcctaagcagctgtacgagcactttaaagacgac
tacgaaatccatgacatcaactggaatgaagaaaaagctaccgccattcttgagtcctgg
cagaggaagtttgtggaggtggttcaccagagtatcccatctaactccagtcagtccatc
catgctttctctaccaccaccctcaatgacatcatgaaatccttctctgatgtcagcgtc
atcagggtggctgggggctacctgctcatgctggcctatgcctgtgtgacaatgctacgg
tgggactgtgccaagtcccagggtgctgtggggctcgctggggtgctgttggttgccctg
tcggtggcagcaggactgggtctctgctccctgcttggtctctccttcaatgccgcaacc
acacaggtgcttcccttcctggcactagggattggtgtggatgacatgtttctgttggct
cactccttcacagaaactggaattaacatcccctttaaggagcggacaggagactgtttg
cgtcgcaccggcaccagcgtggctctgacttccgtcaacaacatgattgcattcttcatg
gccgctcttgtacccatccctgccttgcgagctttctcattgcaggcagccattgtggtt
gtgttcaactttgccatggtgctgctcatcttcccggccatcctcagtttggacctccac
cggcgcgaggacaagcgtttggatgtcctctgctgcctgtacagcccctgctctgatcgc
gtcatccacctgtctccgcacgagctgtcggatgccggagagcagccgcacacgccaacg
acagggacggcgcacacccaccagtacgctgcagggtcgacaatcaccaccagcacccag
atcaccaccacagtgcaggcgttcacgcagtgcgatgcagcggggcagcatatcgtcacc
atcctgccgcccacttcgcagatctccaccagccctccttccatcatcctctgccccacc
tcccaggctcaagccatctcaccgtcccccaccaccacttccgtgccggacccctacggc
tcccagctcttcacccctacctccagctccacgcgggacctcttagcccaggtggacgac
tccaaatcagggaagaagtgtgtcccgcttcctttcctgcactggaacctctccagtttc
gccagggagaaatacgcccctctgctcctcaagcccaagagcaaagccctcgtggtcgtc
ctcttcctgggcctcctgggtcttagcctgtatgggaccaccatggtgcacgacggcctc
tacctgactgacattgtgccacgtgacaccaaggagtatgacttcattgacgcccagttt
aagtatttctccttttacaacatgtacctggtaaccatggatggatttgattacgcccgc
tctcaaaggctgctgattcagctgcacaacgccttcaactctgttaaatatgtggtccga
gacggtgacaacaaactgccccgcatgtggctgcactacttccaggactggctcagaggt
cttcaggcggcttttgatgctgactggcaggcaggcaggattacagctgacagctatcgt
aacagcacagaggacggagctctggcgtacaagctcctcatccagaccggctccaagaaa
gagcccttcaactacagccagctgacttctcgccggctgttggatgcagaaggtttgatt
cccccggaggtgttttacatttacctgacagtctgggtcagtaatgatcctctgggttac
gctgcctcccaggccaacttctaccctcaccccagggagtggatccatgacaaatatgac
acgacaggggaaaatctgcgcatcccagcagcagaacctctggagtttgctcagtttccc
ttctacctgaacggcctccgccaagccagcgactttgtggaagccatcgagagcgtgcgg
gccatctgtgatgagtttagccgcaagggcgtgttcaactaccctaatggataccccttc
ctgttctgggagcagtacattggcctcagacactggtttctgctggccatcagtgtggtg
ctggcctgcaccttcctggtttgtgcgatcctcctgctcaacccctggaccgccggcatc
attgtgtttatcctggcaatgatgactgtggagctgtttggcatcatgggcctcattggc
atcaaactcagtgccattcctgtggtcatcctcattgcctcagtgggcatcggagtggag
tttactgttcacatcgcactgggcttcctgacagcaattggcaacagaaaccatcgctcg
gcagtggcactggagcacatgtttgccccggtggtcgacggagccatctccacactgctg
ggtgttctcatgctggcagggtcggagttcgacttcatcatgaggtattttttcgctgtg
ctcgccatcctgactgtcttgggggtgctgaatgggttggttctcctccccgtcctcctc
tccatgatgggtcctccggctgaggtcaccccagttgataatgctagctgcctgccgaca
ccttccccagagcccccgctgcctccaccaatgacccaccacggctactacacaggccac
cacaacccacgctcgtctcgccaacaagccttttcagaatcgtcggactcggagtattac
tctgagctgaccaccacatcagcgactggggaggaggattacaagtactgtgaccggaat
gcgtatctagcatcacacaccggcgttccacctgcaacatctcacatactgctagaggca
agcaagaacccgagcttccccaaactcacggtggtgaagccattcagagaaaacgcaaca
gcccccggtgggaggattgaaccattaaacgaatcttcccacaatgcacagtcacatctc
agctcccaggttacatgctgggatggaaacaagcgggagcaacagaagggcctccagaga
ctccaggctccggccggacaacacttacccagcgacagagctaactttcctgggaggact
tgtcaaagcggccccaggctgcagaacggcagagggccgcagcccaacaggactaaaggg
tcgagctatatccatagcaacagtgctctgccgacacaacaaggctctgctgggggaccc
gttaccatggttacagccacagcctccgtgacagtggctgtacatccaaccttgccaggg
gcggcataccaaggttacatgcatgaaggttttgacacggacagcgagtcggactgtttc
gaggctgctaagaggacttgtggtgacaaaacaaacttttcttcatgtaagagagactct
ctagagctccaggacttggaagcagcacagggccagacagagtatcagctcagcaagaca
caaggtgggctgaggatccaggcatccaaagattgctag
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