Amphiprion ocellaris (clown anemonefish): 111568163
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Entry
111568163 CDS
T06018
Symbol
slit2
Name
(RefSeq) slit homolog 2 protein isoform X16
KO
K06839
slit 2
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aoce00536
]
111568163 (slit2)
Glycosaminoglycan binding proteins [BR:
aoce00536
]
Heparan sulfate / Heparin
Axon guidance molecules
111568163 (slit2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
EGF
LRR_4
LRR_5
Laminin_G_2
LRRNT
Laminin_G_1
LRR_9
LRRCT
hEGF
LRR_1
EGF_TEN
LRR_14
EGF_DL_JAG
JAG1-like_EGF2
Laminin_G_3
EGF_3
EGF_Teneurin
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
111568163
NCBI-ProteinID:
XP_023125437
Ensembl:
ENSAOCG00000014555
LinkDB
All DBs
Position
4:complement(16128400..16236413)
Genome browser
AA seq
1565 aa
AA seq
DB search
MVGAPCPVGPGRSPATVRGLLLVAALVLLVLSSGADGQPCPAQCSCTGTTVDCHGQGLRS
VPRNIPRNTERLDLNANNLTKVTKADFAGLRHLRVLQLMENKITTIERGAFQDLKELERL
RLNRNNLAIFPELLFLGTTKLYRLDLSENQIQGVPRKAFRGAVEIKNLQLDYNHISCIED
GAFRALRDLEVLTLNNNNISRLSVASFNHMPKLRTFRLHSNNLQCDCHVAWLSEWLRQRP
RLGLYTQCMAPPHLRGHNVAEVQKKEFVCTDWDEGHQSSSSSSCSVLQCPESCTCSNNIV
DCRGKGLTEIPTNLPETITEIRLEQNAIKVIPAGAFSPYKKLRRIDLSNNQISELASDAF
QGLRSLNSLVLYGNKITEISKGLFEGLFSLQLLLLNANKIACLRVDAFQDLHNLNLLSLY
DNKLQTIAKGTFSSLRAIQTLHLAQNPFICDCHLKWLADYLQDNPIETSGARCTSPRRLA
NKRIGQIKSKKFRCSGTEDYRSKLGGDCFADLACPEKCRCEGTTVDCSNQKLTKIPDHIP
QYAAELRLNNNEFTVLEATGIFKKLPQLRKINLSNNRITDIEEGTFEGASGVNELILTSN
RLENIHHRMLKGLSGLRTLMLRSNRISCVSNSSFVGLSSVRLLSLYDNQITSMNPGAFDT
LHSLSTLNLLANPFNCNCHLAWLGDWLRRKRIVTGNPRCQSPYFLKEIPIQDVAVQDFAC
EDGNDENSCSPVLRCPAECSCLDTVVRCSNKGLTALPKGLPKETTELYLDGNHFTQVPVE
LSNYKHLTLIDLSNNQISTLSNHSLSNMSELLTLILSYNRLRCIPVRAFDGLKSLRLLSL
HGNDISLIPEGAFKDLSSLSHLALGANPLYCDCHMQWLSDWVKSGYKEPGIARCAGPGDM
TDKLLLTTPSKKFTCTGPVDMSIQAKCEPCLSNPCKNDGTCANDPVHYYRCTCPYGFKGQ
NCEEPIHACISNPCQNGGTCHLKEGEGSNFWCVCPEGFEGDACEINIDDCEDNDCENNST
CVDGINNYTCMCSPEYTGELCEEKLDFCAPELNQCQHDSKCILTPQGYKCECTPGYVGEH
CELDYDDCEENKCQNGGQCIDAVNGYTCVCPEGYSGLFCEFSPPMVLPRTSPCDNHECLN
EAQCVVVGTDPRCQCLHGYEGERCETLVSVNFVNRESYLQLPSSLLSPQTNISLQIATDE
DSGVLLYKGDNDHIAMELYRGRLRVSYDTGSYPPSAIYSVETVNDGSFHAVELVASDQTL
SLSIDGGPPKSINSINKQSTLNIDSPLYLGGMPERASATGGLSALQHSSGGRNGTSFHGC
LRNLYINGKLQDLGAGLEPGTSGSGALQSTTRQWLGQGVEPGCQPCQRGACVQGDCHPMG
HRGFTCTCHPGWTGAVCDQQVSNPCDGNKCIHGTCLPINSYSYSCRCQPGFAGVLCDEQD
QDAANLCSLSRCKHGKCRVSGLGKAYCECNSGYTGEACDREVACRGERVRDVYQRQQGYA
ACQTQEKVSRLECRGSCPGGAEGQGTCCTPLRSKRRKYTFQCTDGSSFVQEVEKVVKCGC
TKCSS
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagctccgtgccccgttggccctggccgctccccggcgacagtgcgggggctg
ctgctggtggctgctctcgtcctcctggtcctgtccagcggagcggacggtcagccctgc
ccggcccagtgctcctgcaccgggactacagtggactgtcacggccaagggctccgcagc
gtgcccaggaacataccccgcaacacggagagactggatctgaacgcaaacaacctcact
aaagtcaccaaggcggattttgcaggactgaggcatcttcgagtgttgcagttaatggag
aacaaaatcaccacaatcgagagaggagccttccaggacctgaaggagctggagagactg
cgcctgaatcggaataatctggccatctttcccgaactgcttttcctgggaacaacgaag
ctgtacagacttgacctcagcgagaaccagattcaaggggttccaagaaaagccttcagg
ggagctgtggaaatcaagaacctccagttggactacaaccacatcagctgcatcgaggat
ggagctttccgagcgttacgtgacctggaagtgctcaccctcaacaataacaacatcagc
cgactgtctgtggccagtttcaaccacatgccgaagctcaggacctttcgcctgcactcc
aacaacctgcagtgtgactgccacgtagcctggctgtcagagtggctgcgacagcgcccc
cgcctgggtctttacacgcaatgcatggcccctccgcacttgagggggcacaacgtggct
gaggtgcagaagaaggagtttgtatgcacagattgggacgaaggtcaccagtcgtcatcg
tcttcctcctgcagtgtgttacagtgcccagagtcctgcacctgcagtaacaacatcgtg
gactgcagagggaagggtctgacagaaatacccaccaacctgcctgaaaccattactgag
atacgactggagcagaacgccatcaaggtgatcccagctggggccttttctccttataag
aagctgcgcaggatagacttgagtaacaaccagatatcagagctggcctcggatgccttc
caaggtctgcgctccctcaactctctggtactatatggaaacaagatcactgagatttcc
aaagggctgtttgagggactgttttctctgcagctcttgttactgaatgctaataagata
gcatgtctgcgcgtcgacgcatttcaggaccttcacaacctcaatctgctatcactgtat
gacaacaagctccagaccatcgccaaggggactttctcttcactgcgagccatacaaacg
cttcatttagcccaaaacccgtttatctgcgactgccatctgaagtggctggctgactac
ctgcaggacaatcccatcgagacgagcggcgcccgctgcaccagccctcgccggctcgcc
aacaaacgaatcggtcaaatcaagagcaagaagttccgctgctcaggtacagaggattac
cgcagcaaactcggaggtgactgctttgccgacttggcctgtcctgagaagtgtcgctgt
gagggcaccacggttgactgctccaaccagaaactcaccaaaataccagatcacattcct
cagtacgcggccgaactgcgtctgaacaacaatgaattcactgtgctcgaggcgacgggt
atcttcaaaaagttgcctcagctgaggaaaattaacctgagtaataaccgtatcactgac
atagaggaggggacatttgaaggcgcctcaggggtcaatgagttgattctgacctccaac
agactggagaacatacaccaccgcatgctgaagggactgagtggcctccgcacactcatg
ctaaggagtaaccgtatcagctgtgtgagtaacagcagcttcgtgggtttgagctcagtg
cgtctcctgtcactctacgacaaccagatcacctcgatgaaccccggagccttcgacacg
ctgcactctctgtccacgctaaacctcctggccaatcccttcaactgtaactgccacctg
gcttggctcggcgattggctgagaaggaaacgcattgtcaccggcaaccctcgctgccaa
agtccctacttcctgaaggagatccccatccaggatgtagctgtccaggacttcgcctgc
gaagacggtaatgatgagaacagctgctctccggtgctgaggtgtccagcagagtgttcc
tgtctggacactgtggtgcgctgcagcaacaagggtctgactgcgctgcccaaaggcctc
cccaaagaaaccactgaactatacttggatggaaatcacttcactcaggttcctgtggag
ctctccaattacaaacacttaacgctcattgatttgagtaacaaccagatcagcacgttg
tccaaccacagcctcagtaacatgtccgagctgcttaccctaatcctgagctacaaccgg
ctgcgatgcataccagtgagggcgttcgatggacttaaatctcttcgtctgctgtctctc
catggtaacgacatatcgctgatccctgagggagccttcaaagacttgtcatcgctttcc
cacctggctctgggtgccaaccctctgtactgtgactgccacatgcagtggctgtcagac
tgggtgaagagcggctacaaggagcccggcatcgctcgctgtgctgggcccggtgacatg
accgacaaactgctcctcaccacaccctccaagaagttcacctgcacaggcccagtggat
atgagtatccaggctaaatgtgagccctgcctgtccaacccctgcaagaacgacggcaca
tgcgccaatgaccctgtgcactactaccgctgcacctgcccgtacggatttaagggccag
aactgtgaggagccgattcacgcctgcatcagtaacccctgccagaacggaggaacttgc
catctgaaggaaggagaagggagcaacttctggtgtgtgtgtcctgagggcttcgaaggc
gacgcctgcgagatcaacattgatgactgtgaagacaacgactgtgagaacaactccacc
tgcgttgatggaatcaacaactacacgtgcatgtgttcgccagaatacacaggggaactg
tgtgaagagaaactggacttctgcgcccctgagctgaaccaatgtcagcacgactcaaag
tgcattttgacccctcagggatacaagtgtgagtgcacaccaggttacgtgggtgaacac
tgtgagctggactacgacgactgcgaagagaacaagtgtcagaatggaggtcagtgcatc
gatgctgtgaatggatacacctgcgtctgtccagagggatacagcggattgttctgcgag
ttctctcccccgatggtgcttcctcgcaccagtccctgtgacaaccacgagtgcctgaat
gaggcgcagtgcgtcgtcgtgggaaccgacccccgctgccagtgtctccacggctacgag
ggcgagcgctgcgagacgctcgtcagcgtcaacttcgtcaaccgcgagtcctacctgcag
cttccctccagtctcctctctccacagaccaacatcagcctacagattgctacagatgag
gactctggcgtattgttgtataagggggacaatgatcacattgccatggagctgtacaga
ggacgtctaagggtcagctacgacaccggatcctatcctccttctgctatatacagtgtg
gagacagtgaatgatggtagcttccatgctgtggagttagtagcatcagaccagactctg
tctctgtccatcgatggcgggccgcccaaatccatcaactccatcaacaaacagtccaca
ctcaacatagattctcctctttacctgggagggatgccagagcgtgcctcggccacaggt
ggtctttcggccctgcagcatagctccggcggccgcaacggcaccagcttccacggctgc
ctccgtaacctctacatcaacgggaagctccaggacctgggggccgggctggagccgggg
acgtcaggctcgggggctctacagagcaccaccagacagtggctgggtcagggggtggag
ccaggctgccagccctgccagagaggcgcctgcgtccagggtgactgccacccaatgggt
caccgcggcttcacctgtacctgccacccaggctggacgggagcggtgtgcgaccagcaa
gttagcaacccctgcgatggcaataagtgtatccatggtacctgcctcccgatcaactcc
tactcttactcctgccgctgccagccgggcttcgctggcgtcctctgtgacgagcaggac
caggatgcagcgaacctctgcagtctgtcccgctgcaaacatggcaaatgcagagtgtcg
ggtctgggcaaggcctactgcgagtgcaacagcggatatacaggagaggcgtgcgacaga
gaggtggcctgccgaggggaacgggtccgagatgtctaccagagacagcaaggctacgcg
gcgtgccaaacccaggagaaggtctcccgtctagagtgtcgaggcagctgcccggggggg
gcagaaggacagggcacctgctgcaccccccttcgcagcaaacgtaggaaatacaccttc
cagtgcactgatggctcctcttttgtccaggaagtggagaaagttgtcaagtgtggctgt
acaaagtgttcttcgtaa
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integrated database retrieval system
