Amphiprion ocellaris (clown anemonefish): 111568405
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Entry
111568405 CDS
T06018
Name
(RefSeq) retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04110
Cell cycle
aoce04218
Cellular senescence
aoce04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111568405
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
111568405
04218 Cellular senescence
111568405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111568405
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
111568405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
111568405
NCBI-ProteinID:
XP_023125819
Ensembl:
ENSAOCG00000005620
LinkDB
All DBs
Position
5:1770216..1795595
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AA seq
1071 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRKSLETLCQELNMDEQTAAEAMDNFTGIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRSSKLSLIQFFSKMKKWADMSNLSQDF
RLRMDRLERNFEVSTVIFRKFEPIFMDMFQNPQGGEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFGNALLCANRKDLINPTFRGLPALYRPD
GHVSSDEPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLFQKEILKGNEELLTEMLD
PQNFIDNNKAMNREYEEYVLTVGDFDERVFLGADADEEIGTPRKIIQETTVSQTTAQNQL
QQHVEKSGSLAPSTPLTGRVYLKEKDLLVTPVSSATQSVGRLQSMVAGLRTAPSDHLMQI
FKSCSRDPTESILARVKILGQTFKEHYTNDSDDTPGSHIDFAENRLKLAEILYYKILENV
MVQETKRLQGRDMSVLLEQDIFHCSLIACCLEVVLFSYSSQRTFPWIISVFKLAPFYFFK
VIEVFIRSEEGLSRDMVKHLNSIEEQVLESRAWTADSALWSALQVAGNKVPTVEEVNFSS
SLDTGSGSGSFSAGSTVQSHLPLVALSPIIHPRIREFRSGLGSARKDMPPSPLSVHDRYS
SPAAGSAKRRLFGDDPPAPSPGLNPSGSPMPSPAKRLTFGSSSTLKIGAQGTQTTVLSIP
LQGMNNERTITLIPVQPCDSSAAVTAQFLLTASPSRIAPIPAPAAATTSDPQTGSGRPRR
TGSLALFFRKVYHLASVRLRDLCVKLDISSELRGKIWTCFEHSLVHSTDLMKDRHLDQLL
LCSIYIISKITKETHTFQDIMKCYRSQPQASSHVYRSVLLRHTPREQVADENMEVDSVSG
GESAEKTNQLPGDANSNQSVEEERGDLIQFYNSVFVLKMKSFALRYAIHDNRADAPPLSP
FPSVRAQPLSPRRVSQRHSLYVSPHKNSAACLTPNSYTYRINSSPSKELSDINRMIRQGC
VSRKRAFTMEGDVMMSSACDSPSKRACPENGSSPDVLLKRLQDVVSERQSH
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaggagtcgtcggattcggagtcggggaggatggaggagagctcggtgcgg
aagagcctggagacgctgtgtcaggagctgaacatggacgagcagactgccgctgaagcc
atggacaacttcaccggcatctggaacacctacactctggagggggaggtggtgcactgg
ctggcctgttcgctgtacgcagcctgcaggaagggctccactcccacagtgggtaaagga
ctgatggagggaaactgcgtctccctcactaggatccttcgctcgtccaaactcagtctg
atccagttcttctccaagatgaagaagtgggccgacatgtccaacctctcgcaggacttc
aggctacgaatggatcgactggagcgaaactttgaggtctccaccgtgatcttccgcaag
tttgagcccatcttcatggacatgtttcagaatccacagggaggagagccgccgcgacag
ccacgcagcaggaaacacaggcggctgccctgtcacatcagtgatgtgttcaagttctgc
tggactctgtttgtctacaccaaagggaacttccgtatgatcggtgacgacctggtgaac
tcgtaccacctgctgctctgctgtctggacctggtgtttggaaacgctctgctgtgtgcc
aacaggaaggacctcatcaacccgacgttcagaggtctgcctgctctgtaccgccctgac
ggccatgtttcctctgatgaacctcctccatgtgtgttggagaggctgtgtgagctgcat
gacgggctggtggtggaggccaagggcatcaagcagcactacttcaaaccctacatacag
aagctcttccagaaagagattctgaaaggaaacgaggagcttttgacagaaatgttggat
cctcagaacttcattgacaacaataaagccatgaacagggagtacgaggagtacgtgttg
acggtgggagacttcgatgaaagagtgtttctgggagctgatgctgacgaggaaatcgga
acgccgaggaagatcattcaggaaacaactgttagccaaacaacggcgcagaaccagctg
cagcagcacgtggagaagtccggctctctcgccccctccactcctctaacgggacgagtc
tacctgaaggagaaggacctgctcgtcacgcctgtttcctcggcaacgcaaagtgtgggc
cgactgcagagcatggtggccggtctgaggacggcacccagcgaccacctgatgcagatc
ttcaagtcctgctccagagatcccacagagtccatactggctcgagtcaagattctggga
caaaccttcaaagaacattacaccaacgactcagacgatacgcctggctctcatatagac
tttgcagagaaccgtctgaagctggcggagatactctactacaagatcctagagaacgtc
atggttcaggagaccaaacggctgcagggcagagacatgagtgttttactggagcaggac
atcttccactgctccctgatagcgtgctgtctggaggtggtgctgttttcgtacagctcc
cagaggaccttcccatggatcatcagcgtcttcaaactggctccgttttacttcttcaag
gtgatcgaggtgtttatccgctcagaggaaggcctgtccagagacatggtgaagcatctg
aactcaattgaggagcaggtcctggagagcagagcgtggactgcagactctgccctgtgg
agcgccttgcaggttgctgggaacaaagttcccacagtggaggaggtgaatttttcctcc
agtcttgacactggctctggttctggctccttcagtgctggttccacagttcagtcccac
cttcccctggtggccctctctcccatcatccaccctcgtatcagggagttcagatcaggc
ctgggcagtgcacgtaaagatatgcctccatctccgctgtcggtccatgacaggtacagc
tctcctgcggccggcagcgctaagcggcgtctcttcggtgacgaccctccggctccatct
ccaggcctcaaccccagcgggagccccatgccgtctccagccaagaggctgacgtttggc
tccagcagcaccctgaagatcggagcacaggggacccagaccaccgtcctgagcatcccg
ctgcaagggatgaataatgagcgcaccatcacgctgatcccagtccagccatgtgactcc
tctgctgccgtcaccgctcagttcctgctgactgcctcccccagccggatcgcccccatc
ccggcccccgctgctgccacgacctccgacccccagacaggaagtggacggccgcgacgc
accggatcactggcgctgttcttcaggaaggtgtaccacctggccagtgtacgtctcagg
gatttgtgcgtgaagctggacatctcatcggagctgagagggaaaatctggacgtgtttc
gagcattctctggtccactctaccgatctgatgaaggaccgacaccttgaccagctgctg
ctgtgcagcatttacatcatatccaaaatcactaaagagacgcacaccttccaggacatc
atgaagtgttaccggagccaaccacaggccagcagccacgtgtaccgcagcgtcttactg
cgtcacactcccagagagcaggtagctgatgaaaacatggaggtggattctgtttcaggt
ggagaatctgcagagaaaaccaatcagctcccaggagatgcaaactccaaccaatcagtg
gaggaggagcgtggagacctcatccagttctacaacagcgtgtttgtcctgaagatgaag
agctttgcactgcgatacgccatccacgataaccgggccgacgctcctcctctctctccg
ttcccgtcggtccgggctcagcctctttctcctcgcagagtctctcaaagacactcgctg
tacgtctcccctcacaagaactcagcagcctgcctcaccccgaactcctacacctacagg
atcaacagcagcccgtccaaggaactgtcagacatcaaccggatgatccggcagggctgc
gtgagcaggaagagggccttcactatggagggagatgtgatgatgtcatcagcgtgcgac
tcccccagtaagagggcgtgtccagagaacggcagcagtccagatgtgctgctgaagcgt
ctgcaggacgtcgtgtcggagaggcagagtcactga
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