Amphiprion ocellaris (clown anemonefish): 111568473
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Entry
111568473 CDS
T06018
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03420
Nucleotide excision repair
aoce04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111568473 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
111568473 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aoce03051
]
111568473 (rad23aa)
03400 DNA repair and recombination proteins [BR:
aoce03400
]
111568473 (rad23aa)
Proteasome [BR:
aoce03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
111568473 (rad23aa)
DNA repair and recombination proteins [BR:
aoce03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
111568473 (rad23aa)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
UBA_3
Crinkler
Dsc3_N
Ubiquitin_2
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
111568473
NCBI-ProteinID:
XP_023125912
Ensembl:
ENSAOCG00000024571
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All DBs
Position
19:4091765..4103563
Genome browser
AA seq
365 aa
AA seq
DB search
MQITLKTLQQQTIQIEIDPEQTVKALKEKIEAERGKDNFPVSGQKLIYAGKILQDDTPIK
DYKIDEKNFVVVMVSKAKPSAAASPPVSEAPKPPVQDSGSTSTAAPTTNPASAPAPTPAA
VPIPPEEAKQEPSSAATEPQQPASSSGGSQGLDASSALVTGAEYEAMLTEIMSMGYERER
VVAALRASFNNPHRAVEYLLTGIPSSPVQESNPPAQAPASGPTEAPSLAEGENPLAFLRT
QPQFLHMRQAIQQNPALLPALLQQLGRENPQLLQQISQHQELFIQMLNEPVGEGGDAPEV
GEMGAAGEEGAPVNYIQVTPQEKEAIERLKALGFPEALVIQAYFACEKNENLAANFLLNQ
GLEDD
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctgaaaaccctgcagcagcagactattcagatcgagatagaccccgaa
caaacggtgaaggccttgaaagagaagatagaagcagaaagaggaaaagacaactttcct
gtatcggggcagaagctgatatacgctgggaaaatcttgcaggatgacacgccaattaag
gactacaaaattgatgagaagaattttgttgtagtgatggtgtccaaggctaagccctca
gctgcagcctcgccgcccgtctcagaagcgcccaagccccctgtacaggattccggctcg
acatcaacagctgccccgaccacaaacccagcttcagccccagccccaaccccagcagct
gtccccattcctcccgaggaggccaaacaggagccaagttccgcagccacagaaccacaa
caaccagccagctccagtggcgggagtcagggcttggatgcttcctcagcgcttgtgact
ggagccgagtacgaggcgatgctgacagagatcatgtctatgggctatgaaagggagcga
gtggtggcggcgctacgggccagtttcaacaacccccacagagctgtggagtacctcctc
accggtatccccagcagcccagtgcaggaaagtaatcctcctgcgcaggctcccgcatct
ggacccacagaagccccatctctagcagaaggagagaacccacttgcattcctgcggact
cagccccagttcctgcacatgagacaggccatccagcagaaccccgctctgctaccggct
cttctccagcaactaggccgggagaaccctcagcttctacagcaaatcagtcagcatcag
gagctgttcatccagatgttgaacgagccggtgggtgaggggggagacgcaccggaggtc
ggagagatgggggcagcgggggaggagggcgcccccgtcaactatatccaggttacacct
caggagaaggaagccattgaaaggttaaaagcgttgggtttccctgaggctctggtgatc
caggcctacttcgcctgcgagaagaacgagaacctggcggccaactttctcctcaaccag
ggactggaagacgactga
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