Amphiprion ocellaris (clown anemonefish): 111568550
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Entry
111568550 CDS
T06018
Symbol
vps52
Name
(RefSeq) vacuolar protein sorting-associated protein 52 homolog isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111568550 (vps52)
Membrane trafficking [BR:
aoce04131
]
Protein recycling
Others
EARP complex
111568550 (vps52)
Endosome - Golgi transport
Tethering complex
GARP complex
111568550 (vps52)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
DUF3440
MscS_porin
Motif
Other DBs
NCBI-GeneID:
111568550
NCBI-ProteinID:
XP_054873643
Ensembl:
ENSAOCG00000023412
LinkDB
All DBs
Position
15:2603969..2624817
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AA seq
730 aa
AA seq
DB search
MADGAAAAGAGYDVNTPGPGVNTAGNPTEIAMAYLQDEKTDGDIANLNLGELDLTTDEFI
LDEVDIHIQANLEDELVKEALRTGVDLRQYSKQVEAELQRIEQASIKDYIKESQNIALLH
NQITACDSILERMEGMLSGFQSDLSSISSEIQTLQQQSVSMNVRLKNRQAVRSHLSQLVD
ELVVPGAMISTILDSPVTEQEFLEQLHELNNKINFAKELSFRETLACSDIQDIVDRLKLK
AVSKIREFILQKIYSFRKPMTNYQIPQNTLLKYRFFYQFLLANERTVAKEIRDEYVDTMS
KIYFSYFKSYSGRLLKVQYEEVADKDDLMGVEDTAKKGFFSKPSLKSRNTIFTLGQRGSI
LSPAELEGPILVPHTAQRGDSRYPYETLFRSQHYALLDNGCREFLFLSDFFMVAGNSALD
LFNSIMGKTLSMFLKSMSTYVSDCYDSIAIFLCIHIILRFRAITAKRTIPALDKYWEAVL
ELLWPRFDLILEMNIHSIRNTDPQKLGVLDTRPHYITRRYAEFSSAIVSINQTFPNERTN
ALLGQLQIEVENFVLKMAAEFPSRRDQLIFLINNYDMMLSVLMERAADDSKEVEGFQQLL
LARTQEFIEEILSPPFGGMIAFVKEAEALMEKGQLDRLKNEEARISQLVRGFSSSWKQSV
EAMSQDVMRSFTNFKNGTSIIQGALTQLIQYYHGFHKVLNQPTFRSLAVRSELINLHHLM
VEVKKHKPNF
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagccgcagcagctggagctggttacgatgtaaacacacctggtccaggt
gtgaacacggctggaaaccccacagaaatagccatggcgtatttacaagacgagaagact
gatggcgacatcgctaacctgaacctgggagaactggacctcaccactgatgagtttatc
ttggatgaagtggacattcatattcaggccaatctggaagatgaactggtgaaggaggca
ctcagaacgggtgtggatctccgtcagtactctaaacaggtggaggcggagctgcagagg
attgaacaggcgtccatcaaagactacattaaggagagtcagaacatcgctctgctgcac
aaccagatcaccgcctgtgactccatcctggagaggatggaggggatgctgagcggcttc
cagagcgacctgtcctccatctccagtgagatccagacgctgcagcagcagtcggtcagc
atgaacgtccgtctgaagaaccgacaggccgttcgcagccacctgagccagctggtggac
gagctggtggttcctggagccatgatctccaccatcctggacagtccggtgacggagcag
gagttcctggagcagctccatgagctcaacaacaagatcaactttgctaaagagctgagc
ttcagagagacgctggcctgctccgacatccaggacatcgtggaccgcctcaaattgaag
gcggtgtcaaagatcagagagttcattctgcagaagatctactccttcaggaagcccatg
accaactaccagatccctcagaacactctgctcaagtacaggtttttctaccagttcctt
ctggccaatgagagaacggtcgccaaggagatcagagacgagtacgtggacaccatgagc
aagatctacttcagctacttcaagtcttacagcggccggctgctcaaagttcagtatgag
gaggtggcagacaaagatgacctgatgggagtagaagacacagccaagaaaggtttcttc
tccaaaccgtccctgaagagcaggaacaccatcttcacgctgggccagaggggatccatc
ctgagtcctgcagagctggagggtcccatcctggtcccccacacagctcagagaggagac
agcaggtatccctatgagacgctgttccgcagtcagcactacgctctgctggacaacggc
tgcagagaattcctcttcctgtccgacttcttcatggtggcaggaaactcagccctcgac
ctcttcaacagcatcatgggaaaaacactcagcatgttcctgaagagtatgtccacctac
gtgtctgactgctacgacagcatcgccatcttcctctgcatccacatcatcctcaggttc
agagccatcacagccaagaggaccatccctgctctggacaagtactgggaggctgtgctg
gagctgctgtggccgaggtttgacctcatcctggagatgaacatccacagcatcagaaac
acagaccctcagaaactgggagtactggacaccagaccacactatatcactcgtcgttac
gcagaattctcatcagccatcgtcagcatcaaccagacgttccctaatgagagaaccaac
gccctgctgggacagctgcagattgaagtagaaaactttgtgctgaagatggcggctgag
tttccctccagaagagaccagctgatcttcctcatcaacaactacgacatgatgctgagc
gtcctcatggagagggcagcagacgacagtaaggaggtggagggtttccagcagctgctt
ctggccagaacccaggagtttatcgaggagattctttctcctccgtttggagggatgatc
gcctttgtgaaggaggccgaggctctgatggagaaaggccagctggaccggctgaagaac
gaagaagctcggatctctcagctggttcggggattttccagctcctggaaacagtcggta
gaggcgatgagtcaggacgtcatgaggtccttcaccaacttcaagaacggaaccagcatc
atacagggcgccctcacccagctcatccagtactaccacggcttccacaaagtcctcaac
cagcccaccttccgcagcctggccgtccgctcagagctcatcaacctgcaccacctcatg
gtggaggtcaagaaacacaaacccaacttctag
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