Amphiprion ocellaris (clown anemonefish): 111568633
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Entry
111568633 CDS
T06018
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
111568633 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aoce01009
]
111568633 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aoce04131
]
111568633 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
aoce03029
]
111568633 (rb1cc1)
Protein phosphatases and associated proteins [BR:
aoce01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111568633 (rb1cc1)
Membrane trafficking [BR:
aoce04131
]
Autophagy
Autophagosome formation proteins
ULK complex
111568633 (rb1cc1)
Mitochondrial biogenesis [BR:
aoce03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
111568633 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
111568633
NCBI-ProteinID:
XP_023126129
Ensembl:
ENSAOCG00000021262
LinkDB
All DBs
Position
10:complement(19920283..19934462)
Genome browser
AA seq
1617 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLMKFNTAYTNYQH
DLEEIKVKLSKLGTAVAVMARIPLLECLTRHSYRESMEKSSSTPEKDSDETEEEKSTDSV
LCTGEAQMPSKLSASFSASGTATCEAAGDQETNEMTDSGGLRAALLDDDTPELANLSSFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLADCRDTIAKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELIERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKRLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISLEDLQYLKSCCPVEVQPFLMVPTMCD
FEPLHRHVGALQQLVQAAQSVDEMSQTITDLLSEQRASCSQSAQRSTAFTPQSESIPGTT
TPMSSKTPPSLSLQGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGS
LDLDSLAESPESDFMSAVNEFVIEGNLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQ
DTTTLERENSRITVLKQVIEKYRFAAEESHSNLRSVKDDLYHLRGLVLKEQHDFGFVLRS
MTTEVNNIVANICQTRELELKEQHQSELLTSRQELEKQVQTLTEENQVNQNIVRDVQRAM
LELEGLMERKEKELTQYESEKERWVEMESNQTDRMKNLEQVISDQTEEIKMLSASRDSLT
SQLENLHFEIERSQQKIRQELEAVAQCHLKELEDRMKEEHKAELESLTKDNQEALKHLAA
ENSAKMSEAADHHATAIREKDNQVKDLEARITQLAELRCRLEVELALKESETEEVKLLLE
ETKMQQTEAVKSQVEAETKVLSEELADIKKKLHAKNEEYEVDLAELRTLMRIEKDHCISE
LVDRHDEETILLRSKLSSLQQQAQDAEKKHAEQQQKVKEELDQKVAAFSEEKEKQLRSFQ
ELEQELRTVISSLQAENDLLSKKLEQDRQAAEKEEVAKAATPDAFKELEQQKEEMEKRLS
DKIRQLENELHERQSSKSEEGLSLHAEGRTDAGAPLSLDSALQERLQQERASLQTQMELL
EKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEKLRKVTQQQEKDKALIE
TLSEDRASVMQEKKHLEEELNRMRSTALVSSAFFASNPSAHEVTEAGATARALPVSEACS
SEPLAESDRLASVAAIRDDEHVDSAVEASMVTVHDNMMSEEKQRIILLERTLHMKEEENK
RLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYFLHSES
LTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNRKV
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcactttgacatttgacactgacctt
gctgtccaaactgtactagagctcaaacatgccatccaagccaaatataagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagagacgcgtctgc
agctacagtgctggcactgaaaccaaccccatattcctattcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctcaattgagagtgagattcaggtt
aaggtggaggagtccctgctgatgccagccgtctttcacactgttgcctcacgaacacaa
cttgctctggaaatgtttgaagttgccaacaaactttgctctttctgtgaacgtttggtt
catgatgaacaccttcaacaccaaggctgggctgctattatggctaatctggatgactgc
acattgtcttatcagaagttgctcatgaaattcaacactgcatacacaaattatcaacac
gatttggaggaaattaaagttaaactttcaaagttagggacagcggttgctgtgatggcc
aggatacctctgctggaatgtttgacgagacacagttacagagagagcatggaaaagtcc
agttcaaccccagaaaaggattcagatgagaccgaagaagaaaaatccactgactctgtg
ctctgcactggagaagcacagatgccctccaagctatccgcatctttctctgcttcgggg
acagccacatgtgaggcagctggagaccaggaaacaaatgaaatgactgacagtggtggg
ctgagagctgcactattagacgatgacacgcccgagctcgccaacctgtcctcattcaat
gtgacactattagactggatcaacgtacaagacagacccaatgatgtggaatctgttgta
aggaaatgctttgactccatcaataggcttgacccacggatcattcagcccttcctggca
gattgtcgcgacacaattgccaagctagataatcaaaacatgaaggccatcaaagggctt
gaggacaggttgtatgctctagaccaaatgattgcaagctgcaagaagttggtgaatgag
cagaaagaacttgctcagggatttttggccaatcagaaacgggctgaaaacctgaaggat
acatctgttctgcctgacttgtgtttgagtcacaccaaccagctgatgatcatgctcaac
aaccacaggaagctgctagacattaaaaagaagtgcaccactgccaaacaagaacttgca
aacaaccttcaagtcagactgaaatggtgctgttacgtgatgcttcatgcagaccaggat
ggggagaagcttcaggctctgctcagacttctgacagagctaatagaaagagtgagggtg
gtcgaggccctcagtactgtgccccagatgtactgcttggcagttgtcgaagtcgtcaga
agaaaaatgtttatgcgccactacagagagtgggcctatgcacttgtgaaggatgggaaa
cgactgtacgaggcagagaagttcaaaagggaatcctttgggaaactctttagaaagtct
ttcctccgaaaccggttgtttcgaggacttgattcatggcctccaacatcattttgtaca
cgaaagcccagaagatttgatgatgaactcccagacatctcacttgaggatcttcaatac
ttgaaatcttgttgtcctgtagaggtgcagcctttccttatggtccccaccatgtgtgac
tttgagcccttacatcgtcatgtaggggcacttcagcagctggtccaagctgcacagagt
gtggatgagatgtctcaaacgataactgacctgctaagtgaacaaagggcatcttgtagt
cagagtgcccagagatcaactgcgttcactccacagtctgaaagcatacctggaaccaca
acgccgatgtcgtccaaaacgcctccctctcttagccttcagggacccagctgccagcct
ctacatgttcctgtccctgctcctctagaggacttatccccagacagtattgatgcacaa
acatttgactttgaaactattggccatccgaatatggatccagtcctgcaacaaggatcc
cttgacctagattctctagcagagagtcctgaatctgacttcatgtctgctgtcaatgag
tttgtgattgaagggaacttgacctctccaaaccctatcagtgaccccacaagccctgaa
atgatggtggagtcactatactcctcagtcattaatgctattgacaacaagcgaatgcag
gataccacaacactagagagggagaactcaaggatcactgttctcaaacaagttattgag
aagtatcgatttgctgcggaggagtcccattccaacttaagaagtgtgaaggacgacctc
taccacttgcgaggcctagtattaaaagaacaacacgactttggctttgttctgcgcagt
atgaccacagaggtgaacaatattgtggccaacatctgccagacccgtgaactggaatta
aaggagcagcaccaaagtgagcttctgaccagtcggcaagaacttgagaagcaggttcag
acgctaacagaggaaaaccaagtaaaccagaatattgtcagagacgtccagcgtgcaatg
ttggagctggaggggctaatggagcgcaaagagaaagaacttactcagtatgaaagtgag
aaagaacgatgggttgaaatggagagtaatcagactgacaggatgaaaaacctggagcag
gttatcagtgatcaaactgaagagatcaagatgctgtcagcttcaagggactctttgacc
agccagctggagaatctgcactttgagattgaacgtagtcagcagaagatccgtcaggag
ttggaagctgttgcacagtgccatttgaaggagttggaggacagaatgaaggaggaacac
aaggcagaactggagtccctcaccaaggataaccaggaggccctgaaacatcttgctgct
gaaaatagtgcaaagatgagtgaggcagctgatcaccatgctactgctattagagagaag
gacaaccaagtcaaggacttagaagctcggattactcagcttgcagaactccgatgcaga
ctagaggtggagctagccctcaaagaatcagagacagaggaggtgaagctcttattagaa
gaaaccaagatgcagcagacagaggctgtgaagtcccaggtagaggctgagaccaaagtt
cttagtgaagagctggcagatatcaaaaaaaagcttcatgcaaaaaatgaggagtatgaa
gtggatctagcagagctgaggactctcatgaggattgagaaggaccactgcatttcagag
ctggtggacaggcatgatgaggagactattttgttgcgcagcaagctctcttctctacaa
cagcaagcccaggatgctgagaaaaaacatgctgagcagcagcagaaagttaaagaagaa
ttagatcagaaagtggctgcattcagtgaagaaaaagaaaagcagttgaggagtttccaa
gagctggagcaggagctgaggactgttatcagcagtttgcaggcagaaaatgacctgctc
tctaaaaaactagagcaggacagacaggcagctgaaaaagaagaggtcgcgaaggctgca
acaccagatgcctttaaagagttagagcagcagaaggaggagatggagaaaagactgtca
gacaaaatcagacaacttgagaatgagcttcatgagagacagtcctcaaaaagtgaggaa
gggttgtcgctgcacgctgaggggcgtacagatgccggagcacctctgtctctagactca
gcactacaagagcgcctgcagcaggagagggcttccctgcagacacagatggagctcttg
gagaagaagaagaatgaggagatacagaacctcaagacgtctctaatcgcagaacagcag
acaaatttcaacactgttctaacccgagaaaagctgaagaaggagcagatcatcaatgag
ctcacagagaagttgcggaaagttactcaacagcaagagaaggacaaagctctgatagag
acactgtctgaggaccgggctagtgtgatgcaggaaaagaaacacttggaagaagagctt
aaccgcatgcgcagcactgcactggtctcctctgccttctttgcctcaaacccctctgct
cacgaggtcacagaggctggagcaacagctagagctctgcctgtttctgaggcttgttct
tctgagcccctggctgaatctgacagactggcctctgtggcagccattcgagatgacgaa
catgttgattcagcagtggaagccagcatggtgacagtccatgataatatgatgtcagag
gagaaacagcggataatcttacttgagaggactttacacatgaaggaagaagaaaacaag
cgcctcagtcagagactgatgtctcaaagcatgtcgtctgtgtcgtcacggcattcagac
aaaatcgccatcagagatttccaggtaggcgatttggttctaatcatcctggatgaaagg
catgacaactacgtgctgttcacagtcggacccaccctctacttcctccactcagagtct
ctcactgcactggacctcaaaccagcatcagggacctcaagacggccgtgggtacttgga
aaggtgatggaaaaggaatattgccaggcaaaaaaggcccagaacaggttcaaggttcct
ttaggaaccaagttctacagagtgaaagctgttccatggaacagaaaagtataa
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integrated database retrieval system
