Amphiprion ocellaris (clown anemonefish): 111568948
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Entry
111568948 CDS
T06018
Symbol
ybx1
Name
(RefSeq) nuclease-sensitive element-binding protein 1 isoform X1
KO
K09276
Y-box-binding protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111568948 (ybx1)
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111568948 (ybx1)
03041 Spliceosome [BR:
aoce03041
]
111568948 (ybx1)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, YB-1/DbpB-like
111568948 (ybx1)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
111568948 (ybx1)
mRNA cycle factors
Common to processing body (P body) and stress granule
111568948 (ybx1)
Spliceosome [BR:
aoce03041
]
Common components
Common spliceosomal components
General mRNP proteins
111568948 (ybx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSD
OB_RNB
Motif
Other DBs
NCBI-GeneID:
111568948
NCBI-ProteinID:
XP_023126608
Ensembl:
ENSAOCG00000009122
LinkDB
All DBs
Position
Unknown
AA seq
326 aa
AA seq
DB search
MSSEAETQQQPPQPAADAESPSSPAAAASAGDKKVIATKVLGTVKWFNVRNGYGFINRND
TKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPGGVAVQGSKYA
ADRNRYRRYPRRRGPPRGGDYPENYQSDGEGEPSSGGRDKGSRDGGESAPEGDSQQQQRR
PAYPGRRRYPPYFVRRRYGRRPPYTNAPRGEMTEGGEGDENQGGPDQGNKPVRQNYYRGF
RQRFRPRGPPRPRPVRDGEEDKENQGGEGGQNQQPRQRRYRRNFNYRRRRQTTGGKPGQE
TKEAKTGGDPSAEKTSAPEAQQGGAE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaggccgagacacaacaacaaccgccgcagcctgctgccgatgcggagagc
ccatccagcccggcagccgcagcttccgcgggggataagaaggtcatcgcaacaaaagtc
ttgggtacagtcaaatggttcaatgtcaggaatggatatggtttcatcaataggaatgat
acaaaagaggacgtttttgtacaccagacagccatcaaaaagaacaacccgaggaaatac
cttcgcagtgttggagatggagagactgtggagtttgatgtagttgagggggagaaggga
gcagaggcagcaaatgtcaccggcccaggaggtgtcgcagtccaaggcagtaagtacgcc
gctgacaggaaccgttacaggcgctacccacgaaggaggggccctccccgtggaggagac
tatccagagaactaccagagtgacggagagggtgagccaagcagcggaggacgcgacaaa
ggcagcagagatgggggagagagcgcccctgaaggagactcccagcagcagcagcggaga
cccgcttaccctggcagacggcgctacccgccatactttgtacgtagacgctacggccgc
cggcccccgtacaccaacgcaccacgcggagagatgacagagggaggtgagggtgacgag
aaccagggtggtccagaccagggcaacaaaccagtgaggcagaactactacagaggcttc
cgacaaaggttcagaccaaggggtccaccccgtcccagaccggtgcgggacggcgaggag
gacaaggagaatcagggcggcgaaggtggacaaaatcaacagccccgccagcggcgctac
cgccgtaacttcaactaccgccgcagacgccaaacaactggtggcaagcccggccaggaa
accaaggaggccaagacaggaggtgacccatctgcagagaaaacgtccgctcccgaggcc
cagcagggtggggctgagtag
DBGET
integrated database retrieval system
