Amphiprion ocellaris (clown anemonefish): 111569287
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Entry
111569287 CDS
T06018
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Pathway
aoce03018
RNA degradation
aoce03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111569287 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
111569287 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aoce03019
]
111569287 (lsm7)
03041 Spliceosome [BR:
aoce03041
]
111569287 (lsm7)
Messenger RNA biogenesis [BR:
aoce03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111569287 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
111569287 (lsm7)
Spliceosome [BR:
aoce03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111569287 (lsm7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111569287
NCBI-ProteinID:
XP_023127087
Ensembl:
ENSAOCG00000001077
LinkDB
All DBs
Position
2:3260987..3264806
Genome browser
AA seq
103 aa
AA seq
DB search
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaaaagaagaagaaggagagcatcttcgacttgtccaaatacatcgac
aagccgattcgtgtgaagtttcaaggtggacgagaagccagcggagtcctgaaaggcttt
gatcctctactgaacctggtgctggacggcaccatcgagtacatgcgtgatccagacgac
cagctgaagctgacagaagacacccggcagctggggctggtggtctgcagaggaacctcc
gtggtgctgatctgccctcaggacggcatggaggccatccccaaccccttcatccagcag
caggacggctga
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