Amphiprion ocellaris (clown anemonefish): 111569324
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Entry
111569324 CDS
T06018
Symbol
hmbox1b
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
aoce
Amphiprion ocellaris (clown anemonefish)
Brite
KEGG Orthology (KO) [BR:
aoce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aoce03000
]
111569324 (hmbox1b)
Transcription factors [BR:
aoce03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
111569324 (hmbox1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HTH_37
DUF494
HTH_31
NOC3p
Motif
Other DBs
NCBI-GeneID:
111569324
NCBI-ProteinID:
XP_023127134
Ensembl:
ENSAOCG00000014311
LinkDB
All DBs
Position
12:complement(36301007..36341333)
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AA seq
508 aa
AA seq
DB search
MSEFSEEPRFTIEQIDLLQRLRRSGMTKQEILHALETLDRLDREHGDKFGRRTSSSSSSS
SSCGVGGVNSCTNNSASTATPPSFTTNATASAATTSSASCNGNSGAVTSAEGSAADHSAA
ASSTTSKISTATQTQFNSGGGLSPSPSNCYDTSPPPGPPPSAILPSPVALVALAQNGRDS
LAATPNGKLSPPRYPVNSAAAARAFGFEATEEDLDIDDKVEELMRRDSSLVKEEIKAFLG
NRRISQAVVAQVTGISQSRISHWLLQHGSDLSEQKKRAFYRWYTLEKTTPGATLNMRPAP
LPLEEMEWRQTPPPLTTAPGTFRLRRGSRFTWRKECLAVMESYFNDNQYPDEAKREEIAN
ACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIEATILESHGIDVQSPGGHS
NSDDIDGNDFSEQACDLPYFDKRPLSRPFGLYRLEPTSPTQDDSATHSEHQDPISLAVEM
AAVNHTILALSRTGGVPSDIKTESLEDE
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagttcagtgaggagcctcgcttcaccatcgagcagatagatctgctgcagcgg
ctgcgtcgctccgggatgaccaagcaggagatcctgcacgcactagaaactctggaccgg
ctggaccgggagcacggcgacaagttcggccgccggacctcttcctcctcctcgtcctcg
tcctcctgcggagtgggcggggtgaacagctgcaccaacaactctgcctctaccgctact
cccccatccttcaccactaacgccactgcctcggccgccaccacctcctccgcgtcctgc
aacgggaacagcggcgccgtcaccagcgctgagggcagcgccgccgaccactcagccgcc
gcctcttccacgacctccaagatctccacggccacgcagacgcagttcaacagcggtggg
gggctctcgccgtcgcctagcaactgctacgacacctccccgcctccggggccgccgccc
tccgccatcctgccgtctccggtggcgttggtggcgctggcgcagaacggccgcgacagt
ctggccgctacgcccaacgggaagctgtctcctcctcggtacccggtgaacagcgcagcg
gcggcacgggcgtttgggttcgaagccacggaagaagacctggacattgacgacaaagtg
gaggagctgatgaggagggacagcagtctggtgaaggaggagatcaaagctttcctgggg
aaccggaggatttctcaggcagtggtggcccaggttaccggcatcagccagagcaggatc
tcccattggctgctgcagcatggctccgacctgagcgagcagaagaagagggccttctac
cgctggtacacgctggagaaaaccacaccaggtgcgaccctgaacatgcgaccggctccg
ctgcctctggaggagatggagtggaggcaaaccccgcctcccctcaccacggccccagga
accttcaggctgcgtcggggaagtcgcttcacctggaggaaagagtgtctggctgtgatg
gagagctacttcaacgacaaccagtatccagatgaggccaaaagggaggagatagcaaac
gcctgcaatgctgttattcagaaaccagggaagaagctgtctgatctggagagggtcacc
tccctgaaagtttacaactggttcgccaaccgtcgcaaggagatcaagagaagggctaac
attgaagccacaatcctggagagtcatgggatagatgtccagagtccagggggacactcc
aacagcgacgacatcgatggcaacgacttctcagagcaggcttgtgacctcccgtatttt
gacaaaagacctctgagccgaccgtttggcctttatcgcctggagcccacctcacccaca
caggatgacagcgccacccacagtgagcaccaggaccccatctctctggccgtggagatg
gccgccgtcaaccacaccatcctggccctgtccagaaccggaggggtccccagcgacatc
aagaccgagtccctggaggatgaatga
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